RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 DDX19AQ9NUU7 478 aaKnown RBP17.21■□□□□ 0.35
SNPH-203ENST00000614659 PPFIBP1Q86W92 1011 aa17.21■□□□□ 0.35
SNPH-203ENST00000614659 UBAC1Q9BSL1 405 aa17.21■□□□□ 0.35
SNPH-203ENST00000614659 YTHDC2Q9H6S0 1430 aaKnown RBP17.21■□□□□ 0.35
SNPH-203ENST00000614659 CAVIN2O95810 425 aa17.21■□□□□ 0.35
SNPH-203ENST00000614659 DZIP1Q86YF9 867 aaKnown RBP17.21■□□□□ 0.35
SNPH-203ENST00000614659 UPF3BQ9BZI7 483 aaKnown RBP17.21■□□□□ 0.35
SNPH-203ENST00000614659 PCDH11XQ9BZA7 1347 aa17.2■□□□□ 0.34
SNPH-203ENST00000614659 PCDH11YQ9BZA8 1340 aa17.2■□□□□ 0.34
SNPH-203ENST00000614659 BAG4O95429 457 aaKnown RBP17.2■□□□□ 0.34
SNPH-203ENST00000614659 EPS15P42566 896 aa17.2■□□□□ 0.34
SNPH-203ENST00000614659 MAP3K12Q12852 859 aa17.2■□□□□ 0.34
SNPH-203ENST00000614659 ANO10Q9NW15 660 aa17.2■□□□□ 0.34
SNPH-203ENST00000614659 MTMR7Q9Y216 660 aa17.2■□□□□ 0.34
SNPH-203ENST00000614659 CRACR2BQ8N4Y2 399 aaPredicted RBP17.2■□□□□ 0.34
SNPH-203ENST00000614659 ZNHIT6Q9NWK9 470 aaKnown RBP17.2■□□□□ 0.34
SNPH-203ENST00000614659 NBPF6Q5VWK0 638 aa17.2■□□□□ 0.34
SNPH-203ENST00000614659 NBPF5PQ86XG9 351 aaPredicted RBP17.2■□□□□ 0.34
SNPH-203ENST00000614659 SMC5Q8IY18 1101 aa17.2■□□□□ 0.34
SNPH-203ENST00000614659 NBPF4Q96M43 638 aa17.2■□□□□ 0.34
SNPH-203ENST00000614659 ATP6V1AP38606 617 aa17.19■□□□□ 0.34
SNPH-203ENST00000614659 PRM3Q9NNZ6 103 aa17.19■□□□□ 0.34
SNPH-203ENST00000614659 A0A1W2PP64 1363 aa17.19■□□□□ 0.34
SNPH-203ENST00000614659 ALDH1L1O75891 902 aa17.19■□□□□ 0.34
SNPH-203ENST00000614659 CCDC152Q4G0S7 254 aa17.19■□□□□ 0.34
SNPH-203ENST00000614659 KRI1Q8N9T8 703 aaKnown RBP17.19■□□□□ 0.34
SNPH-203ENST00000614659 UQCRHLA0A096LP55 91 aa17.19■□□□□ 0.34
SNPH-203ENST00000614659 UQCRHP07919 91 aa17.19■□□□□ 0.34
SNPH-203ENST00000614659 TMEM132AQ24JP5 1023 aa17.19■□□□□ 0.34
SNPH-203ENST00000614659 PDCL2Q8N4E4 241 aa17.19■□□□□ 0.34
SNPH-203ENST00000614659 KDM5AP29375 1690 aaKnown RBP17.19■□□□□ 0.34
SNPH-203ENST00000614659 NEMFO60524 1076 aa17.19■□□□□ 0.34
SNPH-203ENST00000614659 SETDB2Q96T68 719 aa17.19■□□□□ 0.34
SNPH-203ENST00000614659 CARD14Q9BXL6 1004 aa17.19■□□□□ 0.34
SNPH-203ENST00000614659 MYO6Q9UM54 1294 aa17.19■□□□□ 0.34
SNPH-203ENST00000614659 MYO1BO43795 1136 aa17.18■□□□□ 0.34
SNPH-203ENST00000614659 USP5P45974 858 aa17.18■□□□□ 0.34
SNPH-203ENST00000614659 LUC7LQ9NQ29 371 aaKnown RBP17.18■□□□□ 0.34
SNPH-203ENST00000614659 POLKQ9UBT6 870 aa17.18■□□□□ 0.34
SNPH-203ENST00000614659 CAGE1Q8TC20 777 aa17.18■□□□□ 0.34
SNPH-203ENST00000614659 STK32BQ9NY57 414 aa17.18■□□□□ 0.34
SNPH-203ENST00000614659 CCDC196A0A1B0GTZ2 297 aa17.17■□□□□ 0.34
SNPH-203ENST00000614659 TTF1Q15361 905 aaPredicted RBP17.17■□□□□ 0.34
SNPH-203ENST00000614659 PHAXQ9H814 394 aaKnown RBP17.17■□□□□ 0.34
SNPH-203ENST00000614659 TMEM2Q9UHN6 1383 aa17.17■□□□□ 0.34
SNPH-203ENST00000614659 NAP1L1P55209 391 aaKnown RBP17.17■□□□□ 0.34
SNPH-203ENST00000614659 ATP8B2P98198 1209 aa17.17■□□□□ 0.34
SNPH-203ENST00000614659 ZBTB40Q9NUA8 1239 aa17.17■□□□□ 0.34
SNPH-203ENST00000614659 C6orf229H3BNL8 230 aa17.17■□□□□ 0.34
SNPH-203ENST00000614659 SIRT1Q96EB6 747 aa17.17■□□□□ 0.34
SNPH-203ENST00000614659 PARP3Q9Y6F1 533 aa17.17■□□□□ 0.34
SNPH-203ENST00000614659 IDH1O75874 414 aaKnown RBP17.16■□□□□ 0.34
SNPH-203ENST00000614659 GSTO1P78417 241 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 LEKR1Q6ZMV7 388 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 ZNF622Q969S3 477 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNPH-203ENST00000614659 BABAM1Q9NWV8 329 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 H0YHG0 523 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 MPHOSPH10O00566 681 aaKnown RBP17.16■□□□□ 0.34
SNPH-203ENST00000614659 POLR3DP05423 398 aaPredicted RBP17.16■□□□□ 0.34
SNPH-203ENST00000614659 BOLA2Q9H3K6 86 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 HDAC9Q9UKV0 1011 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 STX6O43752 255 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 DCTPP1Q9H773 170 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 ABCF2Q9UG63 623 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 RTCBQ9Y3I0 505 aaKnown RBP17.16■□□□□ 0.34
SNPH-203ENST00000614659 KDM2BQ8NHM5 1336 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 MAP3K2Q9Y2U5 619 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 OFD1O75665 1012 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 GCP02774 474 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 SDSP20132 328 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 DCAF5Q96JK2 942 aa17.16■□□□□ 0.34
SNPH-203ENST00000614659 PDE1AP54750 535 aa17.15■□□□□ 0.34
SNPH-203ENST00000614659 UBE2HP62256 183 aa17.15■□□□□ 0.34
SNPH-203ENST00000614659 TTLL12Q14166 644 aaPredicted RBP17.15■□□□□ 0.34
SNPH-203ENST00000614659 PPP4R3BQ5MIZ7 849 aa17.15■□□□□ 0.34
SNPH-203ENST00000614659 RDXP35241 583 aaKnown RBP17.15■□□□□ 0.34
SNPH-203ENST00000614659 EDC4Q6P2E9 1401 aaKnown RBP17.15■□□□□ 0.34
SNPH-203ENST00000614659 VAMP4O75379 141 aa17.15■□□□□ 0.34
SNPH-203ENST00000614659 ZGPATQ8N5A5 531 aaKnown RBP17.15■□□□□ 0.34
SNPH-203ENST00000614659 RHPN1Q8TCX5 695 aa17.15■□□□□ 0.34
SNPH-203ENST00000614659 FAM83GA6ND36 823 aa17.14■□□□□ 0.33
SNPH-203ENST00000614659 ATP2B1P20020 1258 aa17.14■□□□□ 0.33
SNPH-203ENST00000614659 ABCA8O94911 1581 aa17.14■□□□□ 0.33
SNPH-203ENST00000614659 KDM5CP41229 1560 aa17.14■□□□□ 0.33
SNPH-203ENST00000614659 ESYT1Q9BSJ8 1104 aa17.14■□□□□ 0.33
SNPH-203ENST00000614659 SBNO2Q9Y2G9 1366 aa17.14■□□□□ 0.33
SNPH-203ENST00000614659 ERLIN1O75477 346 aa17.14■□□□□ 0.33
SNPH-203ENST00000614659 BAG3O95817 575 aa17.14■□□□□ 0.33
SNPH-203ENST00000614659 EIF4A2Q14240 407 aaKnown RBP17.14■□□□□ 0.33
SNPH-203ENST00000614659 TTC41PQ6P2S7 1318 aa17.14■□□□□ 0.33
SNPH-203ENST00000614659 MYO5CQ9NQX4 1742 aa17.13■□□□□ 0.33
SNPH-203ENST00000614659 KIF24Q5T7B8 1368 aa17.13■□□□□ 0.33
SNPH-203ENST00000614659 IP6K1Q92551 441 aa17.13■□□□□ 0.33
SNPH-203ENST00000614659 RNF41Q9H4P4 317 aaPredicted RBP17.13■□□□□ 0.33
SNPH-203ENST00000614659 TNIP1Q15025 636 aa17.13■□□□□ 0.33
SNPH-203ENST00000614659 NLRP3Q96P20 1036 aa17.13■□□□□ 0.33
SNPH-203ENST00000614659 ZSCAN16Q9H4T2 348 aaPredicted RBP17.13■□□□□ 0.33
SNPH-203ENST00000614659 ZBTB3Q9H5J0 574 aa17.13■□□□□ 0.33
SNPH-203ENST00000614659 SLAIN2Q9P270 581 aa17.13■□□□□ 0.33
SNPH-203ENST00000614659 UQCRFS1P1P0C7P4 283 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms