RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 AK9Q5TCS8 1911 aa12.66□□□□□ -0.38
PABPC1-224ENST00000610907 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
PABPC1-224ENST00000610907 KIAA1211Q6ZU35 1233 aa12.66□□□□□ -0.38
PABPC1-224ENST00000610907 NFATC2IPQ8NCF5 419 aa12.66□□□□□ -0.38
PABPC1-224ENST00000610907 RAD50Q92878 1312 aa12.66□□□□□ -0.38
PABPC1-224ENST00000610907 COL15A1P39059 1388 aa12.66□□□□□ -0.38
PABPC1-224ENST00000610907 PKD1L3Q7Z443 1732 aa12.66□□□□□ -0.38
PABPC1-224ENST00000610907 STRCP1A6NGW2 1772 aa12.65□□□□□ -0.38
PABPC1-224ENST00000610907 PRAMEF22A3QJZ6 481 aa12.65□□□□□ -0.38
PABPC1-224ENST00000610907 HIP1O00291 1037 aa12.65□□□□□ -0.38
PABPC1-224ENST00000610907 IFIT2P09913 472 aaKnown RBP12.65□□□□□ -0.38
PABPC1-224ENST00000610907 G3BP1Q13283 466 aaKnown RBP eCLIP12.65□□□□□ -0.388e-11■□□□□ 11.1
PABPC1-224ENST00000610907 CWF19L2Q2TBE0 894 aaKnown RBP12.65□□□□□ -0.38
PABPC1-224ENST00000610907 TTC5Q8N0Z6 440 aa12.65□□□□□ -0.38
PABPC1-224ENST00000610907 FAM43AQ8N2R8 423 aa12.65□□□□□ -0.38
PABPC1-224ENST00000610907 FMNL2Q96PY5 1086 aa12.65□□□□□ -0.38
PABPC1-224ENST00000610907 METTL22Q9BUU2 404 aaPredicted RBP12.65□□□□□ -0.38
PABPC1-224ENST00000610907 PALD1Q9ULE6 856 aa12.65□□□□□ -0.38
PABPC1-224ENST00000610907 MEGF6O75095 1541 aa12.65□□□□□ -0.38
PABPC1-224ENST00000610907 EVI5LQ96CN4 794 aa12.64□□□□□ -0.39
PABPC1-224ENST00000610907 SUCLG2Q96I99 432 aa12.64□□□□□ -0.39
PABPC1-224ENST00000610907 LSG1Q9H089 658 aaKnown RBP12.64□□□□□ -0.39
PABPC1-224ENST00000610907 ERBB4Q15303 1308 aa12.64□□□□□ -0.39
PABPC1-224ENST00000610907 NEURL1BA8MQ27 555 aa12.64□□□□□ -0.39
PABPC1-224ENST00000610907 IGKV5-2P06315 115 aa12.64□□□□□ -0.39
PABPC1-224ENST00000610907 SLC39A6Q13433 755 aa12.64□□□□□ -0.39
PABPC1-224ENST00000610907 GCKRQ14397 625 aa12.64□□□□□ -0.39
PABPC1-224ENST00000610907 ANKRD13DQ6ZTN6 518 aa12.64□□□□□ -0.39
PABPC1-224ENST00000610907 ZGPATQ8N5A5 531 aaKnown RBP12.64□□□□□ -0.39
PABPC1-224ENST00000610907 KAZALD1Q96I82 304 aa12.64□□□□□ -0.39
PABPC1-224ENST00000610907 ZNF496Q96IT1 587 aaPredicted RBP12.64□□□□□ -0.39
PABPC1-224ENST00000610907 GRPEL1Q9HAV7 217 aa12.64□□□□□ -0.39
PABPC1-224ENST00000610907 DDX49Q9Y6V7 483 aaKnown RBP12.64□□□□□ -0.39
PABPC1-224ENST00000610907 CYP27B1O15528 508 aa12.63□□□□□ -0.39
PABPC1-224ENST00000610907 AIMP1Q12904 312 aaKnown RBP12.63□□□□□ -0.39
PABPC1-224ENST00000610907 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
PABPC1-224ENST00000610907 XAGE3Q8WTP9 111 aa12.63□□□□□ -0.39
PABPC1-224ENST00000610907 BICC1Q9H694 974 aaKnown RBP12.63□□□□□ -0.39
PABPC1-224ENST00000610907 DIAPH3Q9NSV4 1193 aa12.63□□□□□ -0.39
PABPC1-224ENST00000610907 PARP4Q9UKK3 1724 aaKnown RBP12.63□□□□□ -0.39
PABPC1-224ENST00000610907 BRD1O95696 1058 aa12.62□□□□□ -0.39
PABPC1-224ENST00000610907 CABP4P57796 275 aa12.62□□□□□ -0.39
PABPC1-224ENST00000610907 MCTP1Q6DN14 999 aa12.62□□□□□ -0.39
PABPC1-224ENST00000610907 LRP10Q7Z4F1 713 aa12.62□□□□□ -0.39
PABPC1-224ENST00000610907 KCNB2Q92953 911 aa12.62□□□□□ -0.39
PABPC1-224ENST00000610907 LMBRD1Q9NUN5 540 aa12.62□□□□□ -0.39
PABPC1-224ENST00000610907 ZDHHC9Q9Y397 364 aa12.62□□□□□ -0.39
PABPC1-224ENST00000610907 C5P01031 1676 aa12.62□□□□□ -0.39
PABPC1-224ENST00000610907 SASH1O94885 1247 aa12.61□□□□□ -0.39
PABPC1-224ENST00000610907 MAP4K4O95819 1239 aaPredicted RBP12.61□□□□□ -0.39
PABPC1-224ENST00000610907 AACSQ86V21 672 aa12.61□□□□□ -0.39
PABPC1-224ENST00000610907 DDX17Q92841 729 aaKnown RBP12.61□□□□□ -0.39
PABPC1-224ENST00000610907 TM6SF1Q9BZW5 370 aa12.61□□□□□ -0.39
PABPC1-224ENST00000610907 COPRSQ9NQ92 184 aa12.61□□□□□ -0.39
PABPC1-224ENST00000610907 SNRKQ9NRH2 765 aa12.61□□□□□ -0.39
PABPC1-224ENST00000610907 SNX14Q9Y5W7 946 aa12.61□□□□□ -0.39
PABPC1-224ENST00000610907 ERVV-2B6SEH9 535 aa12.6□□□□□ -0.39
PABPC1-224ENST00000610907 MYL6BP14649 208 aa12.6□□□□□ -0.39
PABPC1-224ENST00000610907 CWC27Q6UX04 472 aaKnown RBP12.6□□□□□ -0.39
PABPC1-224ENST00000610907 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
PABPC1-224ENST00000610907 IL25Q9H293 177 aa12.6□□□□□ -0.39
PABPC1-224ENST00000610907 PA2G4Q9UQ80 394 aaKnown RBP12.6□□□□□ -0.39
PABPC1-224ENST00000610907 USP16Q9Y5T5 823 aa12.6□□□□□ -0.39
PABPC1-224ENST00000610907 ZNF445P59923 1031 aa12.6□□□□□ -0.39
PABPC1-224ENST00000610907 PKP1Q13835 747 aa12.6□□□□□ -0.39
PABPC1-224ENST00000610907 CHRNA2Q15822 529 aa12.6□□□□□ -0.39
PABPC1-224ENST00000610907 RABL6Q3YEC7 729 aaPredicted RBP12.6□□□□□ -0.39
PABPC1-224ENST00000610907 PLBD2Q8NHP8 589 aa12.6□□□□□ -0.39
PABPC1-224ENST00000610907 TTC14Q96N46 770 aa12.6□□□□□ -0.39
PABPC1-224ENST00000610907 MYD88Q99836 296 aa12.6□□□□□ -0.39
PABPC1-224ENST00000610907 WDR17Q8IZU2 1322 aa12.6□□□□□ -0.39
PABPC1-224ENST00000610907 PCDH11XQ9BZA7 1347 aa12.59□□□□□ -0.39
PABPC1-224ENST00000610907 PCDH11YQ9BZA8 1340 aa12.59□□□□□ -0.39
PABPC1-224ENST00000610907 NKX1-1Q15270 411 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-224ENST00000610907 BRINP3Q76B58 766 aa12.59□□□□□ -0.39
PABPC1-224ENST00000610907 TICAM2Q86XR7 235 aa12.59□□□□□ -0.39
PABPC1-224ENST00000610907 EAF2Q96CJ1 260 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-224ENST00000610907 UPF3BQ9BZI7 483 aaKnown RBP12.59□□□□□ -0.39
PABPC1-224ENST00000610907 LIMCH1Q9UPQ0 1083 aa12.59□□□□□ -0.39
PABPC1-224ENST00000610907 SOS2Q07890 1332 aaPredicted RBP12.58□□□□□ -0.4
PABPC1-224ENST00000610907 WDR33Q9C0J8 1336 aaKnown RBP12.58□□□□□ -0.4
PABPC1-224ENST00000610907 MBD3O95983 291 aa12.58□□□□□ -0.4
PABPC1-224ENST00000610907 PDIA4P13667 645 aaKnown RBP12.58□□□□□ -0.4
PABPC1-224ENST00000610907 ZCRB1Q8TBF4 217 aaKnown RBP12.58□□□□□ -0.4
PABPC1-224ENST00000610907 ZSCAN31Q96LW9 406 aaPredicted RBP12.58□□□□□ -0.4
PABPC1-224ENST00000610907 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.58□□□□□ -0.4
PABPC1-224ENST00000610907 LAMB4A4D0S4 1761 aa12.58□□□□□ -0.4
PABPC1-224ENST00000610907 ZKSCAN1P17029 563 aaPredicted RBP12.57□□□□□ -0.4
PABPC1-224ENST00000610907 VPS53Q5VIR6 699 aa12.57□□□□□ -0.4
PABPC1-224ENST00000610907 GAS2L3Q86XJ1 694 aa12.57□□□□□ -0.4
PABPC1-224ENST00000610907 CCDC171Q6TFL3 1326 aa12.56□□□□□ -0.4
PABPC1-224ENST00000610907 PRPF40AO75400 957 aaKnown RBP12.56□□□□□ -0.4
PABPC1-224ENST00000610907 RFX5P48382 616 aaPredicted RBP12.56□□□□□ -0.4
PABPC1-224ENST00000610907 NECTIN1Q15223 517 aa12.56□□□□□ -0.4
PABPC1-224ENST00000610907 MAP4K1Q92918 833 aa12.56□□□□□ -0.4
PABPC1-224ENST00000610907 CARD10Q9BWT7 1032 aa12.56□□□□□ -0.4
PABPC1-224ENST00000610907 ZSWIM6Q9HCJ5 1215 aa12.56□□□□□ -0.4
PABPC1-224ENST00000610907 PRDM11Q9NQV5 511 aa12.56□□□□□ -0.4
PABPC1-224ENST00000610907 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
PABPC1-224ENST00000610907 ATP5JP18859 108 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms