RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 CWC27Q6UX04 472 aaKnown RBP17.61■□□□□ 0.41
CTCFL-219ENST00000608720 C14orf37Q86TY3 774 aa17.61■□□□□ 0.41
CTCFL-219ENST00000608720 NBPF4Q96M43 638 aa17.61■□□□□ 0.41
CTCFL-219ENST00000608720 ATP6V1DQ9Y5K8 247 aa17.61■□□□□ 0.41
CTCFL-219ENST00000608720 RUFY3Q7L099 469 aa17.6■□□□□ 0.41
CTCFL-219ENST00000608720 KLHL34Q8N239 644 aa17.6■□□□□ 0.41
CTCFL-219ENST00000608720 CLASRPQ8N2M8 674 aaKnown RBP17.6■□□□□ 0.41
CTCFL-219ENST00000608720 DIAPH3Q9NSV4 1193 aa17.6■□□□□ 0.41
CTCFL-219ENST00000608720 STX6O43752 255 aa17.6■□□□□ 0.41
CTCFL-219ENST00000608720 TEFQ10587 303 aa17.6■□□□□ 0.41
CTCFL-219ENST00000608720 AKAP4Q5JQC9 854 aa17.6■□□□□ 0.41
CTCFL-219ENST00000608720 CCDC183Q5T5S1 534 aa17.6■□□□□ 0.41
CTCFL-219ENST00000608720 SMC3Q9UQE7 1217 aa17.6■□□□□ 0.41
CTCFL-219ENST00000608720 BTBD11A6QL63 1104 aa17.59■□□□□ 0.41
CTCFL-219ENST00000608720 ALDH1L1O75891 902 aa17.59■□□□□ 0.41
CTCFL-219ENST00000608720 XPCQ01831 940 aaPredicted RBP17.59■□□□□ 0.41
CTCFL-219ENST00000608720 SASS6Q6UVJ0 657 aa17.59■□□□□ 0.41
CTCFL-219ENST00000608720 GPATCH3Q96I76 525 aa17.59■□□□□ 0.41
CTCFL-219ENST00000608720 DBF4Q9UBU7 674 aaPredicted RBP17.59■□□□□ 0.41
CTCFL-219ENST00000608720 PHF8Q9UPP1 1060 aa17.59■□□□□ 0.41
CTCFL-219ENST00000608720 SYT1P21579 422 aa17.59■□□□□ 0.41
CTCFL-219ENST00000608720 PLEKHO1Q53GL0 409 aaPredicted RBP17.59■□□□□ 0.41
CTCFL-219ENST00000608720 ERC1Q8IUD2 1116 aa17.59■□□□□ 0.41
CTCFL-219ENST00000608720 MED1Q15648 1581 aaPredicted RBP17.59■□□□□ 0.41
CTCFL-219ENST00000608720 MARF1Q9Y4F3 1742 aaKnown RBP17.58■□□□□ 0.41
CTCFL-219ENST00000608720 KCNQ3O43525 872 aa17.58■□□□□ 0.4
CTCFL-219ENST00000608720 UBE2HP62256 183 aa17.58■□□□□ 0.4
CTCFL-219ENST00000608720 ZSCAN31Q96LW9 406 aaPredicted RBP17.58■□□□□ 0.4
CTCFL-219ENST00000608720 TM6SF1Q9BZW5 370 aa17.58■□□□□ 0.4
CTCFL-219ENST00000608720 ECHDC1Q9NTX5 307 aa17.58■□□□□ 0.4
CTCFL-219ENST00000608720 SPG7Q9UQ90 795 aa17.58■□□□□ 0.4
CTCFL-219ENST00000608720 ADCY9O60503 1353 aa17.58■□□□□ 0.4
CTCFL-219ENST00000608720 PTMAP06454 111 aaKnown RBP17.57■□□□□ 0.4
CTCFL-219ENST00000608720 CASTP20810 708 aaKnown RBP17.57■□□□□ 0.4
CTCFL-219ENST00000608720 VPS53Q5VIR6 699 aa17.57■□□□□ 0.4
CTCFL-219ENST00000608720 KCNB2Q92953 911 aa17.57■□□□□ 0.4
CTCFL-219ENST00000608720 HYPKQ9NX55 129 aa17.57■□□□□ 0.4
CTCFL-219ENST00000608720 CNPY2Q9Y2B0 182 aa17.57■□□□□ 0.4
CTCFL-219ENST00000608720 F13A1P00488 732 aa17.57■□□□□ 0.4
CTCFL-219ENST00000608720 DMTNQ08495 405 aa17.57■□□□□ 0.4
CTCFL-219ENST00000608720 KCNH5Q8NCM2 988 aa17.57■□□□□ 0.4
CTCFL-219ENST00000608720 CCDC94Q9BW85 323 aaPredicted RBP17.57■□□□□ 0.4
CTCFL-219ENST00000608720 SETD1BQ9UPS6 1966 aaKnown RBP17.57■□□□□ 0.4
CTCFL-219ENST00000608720 AMOTQ4VCS5 1084 aa17.56■□□□□ 0.4
CTCFL-219ENST00000608720 ZNF530Q6P9A1 599 aaPredicted RBP17.56■□□□□ 0.4
CTCFL-219ENST00000608720 SH2B1Q9NRF2 756 aaPredicted RBP17.56■□□□□ 0.4
CTCFL-219ENST00000608720 PDRG1Q9NUG6 133 aa17.56■□□□□ 0.4
CTCFL-219ENST00000608720 C9orf78Q9NZ63 289 aaPredicted RBP17.56■□□□□ 0.4
CTCFL-219ENST00000608720 ADGRL3Q9HAR2 1447 aa17.56■□□□□ 0.4
CTCFL-219ENST00000608720 IFIT2P09913 472 aaKnown RBP17.56■□□□□ 0.4
CTCFL-219ENST00000608720 EVI5LQ96CN4 794 aa17.56■□□□□ 0.4
CTCFL-219ENST00000608720 ZSWIM6Q9HCJ5 1215 aa17.56■□□□□ 0.4
CTCFL-219ENST00000608720 ANXA1P04083 346 aa17.55■□□□□ 0.4
CTCFL-219ENST00000608720 KSR2Q6VAB6 950 aa17.55■□□□□ 0.4
CTCFL-219ENST00000608720 MAP3K2Q9Y2U5 619 aa17.55■□□□□ 0.4
CTCFL-219ENST00000608720 CYP46A1Q9Y6A2 500 aa17.55■□□□□ 0.4
CTCFL-219ENST00000608720 LMTK3Q96Q04 1460 aa17.54■□□□□ 0.4
CTCFL-219ENST00000608720 PTH1RQ03431 593 aa17.54■□□□□ 0.4
CTCFL-219ENST00000608720 JAKMIP1Q96N16 626 aaKnown RBP17.54■□□□□ 0.4
CTCFL-219ENST00000608720 LARP6Q9BRS8 491 aaKnown RBP17.54■□□□□ 0.4
CTCFL-219ENST00000608720 HIP1O00291 1037 aa17.53■□□□□ 0.4
CTCFL-219ENST00000608720 RNMTO43148 476 aaKnown RBP17.53■□□□□ 0.4
CTCFL-219ENST00000608720 PRPF40BQ6NWY9 871 aaKnown RBP17.53■□□□□ 0.4
CTCFL-219ENST00000608720 MPRIPQ6WCQ1 1025 aa17.53■□□□□ 0.4
CTCFL-219ENST00000608720 PDIA4P13667 645 aaKnown RBP17.53■□□□□ 0.4
CTCFL-219ENST00000608720 ZKSCAN1P17029 563 aaPredicted RBP17.53■□□□□ 0.4
CTCFL-219ENST00000608720 GJB2P29033 226 aa17.53■□□□□ 0.4
CTCFL-219ENST00000608720 KIAA2012Q0VF49 1180 aa17.52■□□□□ 0.4
CTCFL-219ENST00000608720 NECTIN1Q15223 517 aa17.52■□□□□ 0.4
CTCFL-219ENST00000608720 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
CTCFL-219ENST00000608720 CCDC83Q8IWF9 413 aa17.52■□□□□ 0.4
CTCFL-219ENST00000608720 NFAT5O94916 1531 aa17.52■□□□□ 0.4
CTCFL-219ENST00000608720 CRYBG1Q9Y4K1 1723 aa17.52■□□□□ 0.39
CTCFL-219ENST00000608720 GIGYF1O75420 1035 aaPredicted RBP17.52■□□□□ 0.39
CTCFL-219ENST00000608720 CPA1P15085 419 aa17.52■□□□□ 0.39
CTCFL-219ENST00000608720 PSME1Q06323 249 aa17.52■□□□□ 0.39
CTCFL-219ENST00000608720 MTMR6Q9Y217 621 aa17.52■□□□□ 0.39
CTCFL-219ENST00000608720 LARGE1O95461 756 aa17.51■□□□□ 0.39
CTCFL-219ENST00000608720 ADCK5Q3MIX3 580 aa17.51■□□□□ 0.39
CTCFL-219ENST00000608720 AACSQ86V21 672 aa17.51■□□□□ 0.39
CTCFL-219ENST00000608720 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.51■□□□□ 0.391e-9■□□□□ 10.4
CTCFL-219ENST00000608720 KDM3BQ7LBC6 1761 aa17.51■□□□□ 0.39
CTCFL-219ENST00000608720 NCAPD2Q15021 1401 aa17.51■□□□□ 0.39
CTCFL-219ENST00000608720 CCDC171Q6TFL3 1326 aa17.51■□□□□ 0.39
CTCFL-219ENST00000608720 FIBPO43427 364 aa17.51■□□□□ 0.39
CTCFL-219ENST00000608720 GTPBP4Q9BZE4 634 aaKnown RBP17.51■□□□□ 0.39
CTCFL-219ENST00000608720 PA2G4Q9UQ80 394 aaKnown RBP17.51■□□□□ 0.39
CTCFL-219ENST00000608720 OVOS2A0A0G2JMS6 1433 aa17.5■□□□□ 0.39
CTCFL-219ENST00000608720 ZBTB7CA1YPR0 619 aa17.5■□□□□ 0.39
CTCFL-219ENST00000608720 LINS1Q8NG48 757 aa17.5■□□□□ 0.39
CTCFL-219ENST00000608720 LRRC59Q96AG4 307 aaKnown RBP17.5■□□□□ 0.39
CTCFL-219ENST00000608720 HEG1Q9ULI3 1381 aa17.5■□□□□ 0.39
CTCFL-219ENST00000608720 PSMA5P28066 241 aa17.49■□□□□ 0.39
CTCFL-219ENST00000608720 G3BP1Q13283 466 aaKnown RBP eCLIP17.49■□□□□ 0.39
CTCFL-219ENST00000608720 UTYO14607 1347 aa17.49■□□□□ 0.39
CTCFL-219ENST00000608720 DDX58O95786 925 aaKnown RBP17.49■□□□□ 0.39
CTCFL-219ENST00000608720 ZSCAN20P17040 1043 aaPredicted RBP17.49■□□□□ 0.39
CTCFL-219ENST00000608720 CREB3L3Q68CJ9 461 aa17.49■□□□□ 0.39
CTCFL-219ENST00000608720 MAP4K1Q92918 833 aa17.49■□□□□ 0.39
CTCFL-219ENST00000608720 SNRKQ9NRH2 765 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms