RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 L3MBTL3Q96JM7 780 aaPredicted RBP18.1■□□□□ 0.49
CTSA-218ENST00000607814 SCN4AP35499 1836 aa18.09■□□□□ 0.49
CTSA-218ENST00000607814 SCN7AQ01118 1682 aa18.09■□□□□ 0.49
CTSA-218ENST00000607814 DDNO94850 711 aaPredicted RBP18.09■□□□□ 0.49
CTSA-218ENST00000607814 IL6STP40189 918 aaPredicted RBP18.09■□□□□ 0.49
CTSA-218ENST00000607814 CTCFP49711 727 aaPredicted RBP18.09■□□□□ 0.49
CTSA-218ENST00000607814 MCM10Q7L590 875 aa18.09■□□□□ 0.49
CTSA-218ENST00000607814 AIDAQ96BJ3 306 aa18.09■□□□□ 0.49
CTSA-218ENST00000607814 COL11A2P13942 1736 aaPredicted RBP18.09■□□□□ 0.49
CTSA-218ENST00000607814 POTEIP0CG38 1075 aa18.08■□□□□ 0.48
CTSA-218ENST00000607814 POTEJP0CG39 1038 aa18.08■□□□□ 0.48
CTSA-218ENST00000607814 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
CTSA-218ENST00000607814 TMEM88BA6NKF7 163 aa18.07■□□□□ 0.48
CTSA-218ENST00000607814 KCNQ3O43525 872 aa18.07■□□□□ 0.48
CTSA-218ENST00000607814 SRGNP10124 158 aa18.07■□□□□ 0.48
CTSA-218ENST00000607814 TEFQ10587 303 aa18.07■□□□□ 0.48
CTSA-218ENST00000607814 PRPF40BQ6NWY9 871 aaKnown RBP18.07■□□□□ 0.48
CTSA-218ENST00000607814 CNBD1Q8NA66 436 aa18.07■□□□□ 0.48
CTSA-218ENST00000607814 MASTLQ96GX5 879 aa18.07■□□□□ 0.48
CTSA-218ENST00000607814 SETDB2Q96T68 719 aa18.07■□□□□ 0.48
CTSA-218ENST00000607814 HEG1Q9ULI3 1381 aa18.06■□□□□ 0.48
CTSA-218ENST00000607814 ST5P78524 1137 aa18.06■□□□□ 0.48
CTSA-218ENST00000607814 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
CTSA-218ENST00000607814 TAF1DQ9H5J8 278 aaPredicted RBP18.06■□□□□ 0.48
CTSA-218ENST00000607814 ARFGEF2Q9Y6D5 1785 aa18.06■□□□□ 0.48
CTSA-218ENST00000607814 SLX4Q8IY92 1834 aa18.05■□□□□ 0.48
CTSA-218ENST00000607814 NPHP1O15259 732 aa18.05■□□□□ 0.48
CTSA-218ENST00000607814 ZNF790Q6PG37 636 aa18.05■□□□□ 0.48
CTSA-218ENST00000607814 ZNF496Q96IT1 587 aaPredicted RBP18.05■□□□□ 0.48
CTSA-218ENST00000607814 WBP1LQ9NX94 342 aa18.05■□□□□ 0.48
CTSA-218ENST00000607814 TBC1D2BQ9UPU7 963 aa18.05■□□□□ 0.48
CTSA-218ENST00000607814 MYBBP1AQ9BQG0 1328 aaKnown RBP18.04■□□□□ 0.48
CTSA-218ENST00000607814 ITGBL1O95965 494 aaPredicted RBP18.04■□□□□ 0.48
CTSA-218ENST00000607814 VEGFBP49765 207 aa18.04■□□□□ 0.48
CTSA-218ENST00000607814 PLEKHF1Q96S99 279 aa18.04■□□□□ 0.48
CTSA-218ENST00000607814 ZNF316A6NFI3 1004 aaPredicted RBP18.03■□□□□ 0.48
CTSA-218ENST00000607814 C7orf43Q8WVR3 580 aa18.03■□□□□ 0.48
CTSA-218ENST00000607814 RTF1Q92541 710 aaKnown RBP18.03■□□□□ 0.48
CTSA-218ENST00000607814 PRKRIP1Q9H875 184 aaPredicted RBP18.03■□□□□ 0.48
CTSA-218ENST00000607814 BTBD11A6QL63 1104 aa18.02■□□□□ 0.48
CTSA-218ENST00000607814 CAMTA2O94983 1202 aa18.02■□□□□ 0.48
CTSA-218ENST00000607814 CCDC93Q567U6 631 aa18.02■□□□□ 0.48
CTSA-218ENST00000607814 CLEC4GQ6UXB4 293 aa18.02■□□□□ 0.48
CTSA-218ENST00000607814 CCDC146Q8IYE0 955 aa18.02■□□□□ 0.48
CTSA-218ENST00000607814 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
CTSA-218ENST00000607814 THUMPD2Q9BTF0 503 aaKnown RBP18.02■□□□□ 0.48
CTSA-218ENST00000607814 MIS18AQ9NYP9 233 aa18.02■□□□□ 0.48
CTSA-218ENST00000607814 ZNF330Q9Y3S2 320 aaPredicted RBP18.02■□□□□ 0.48
CTSA-218ENST00000607814 SLC34A2O95436 690 aa18.01■□□□□ 0.47
CTSA-218ENST00000607814 PNMA8AQ86V59 439 aaPredicted RBP18.01■□□□□ 0.47
CTSA-218ENST00000607814 FMNL2Q96PY5 1086 aa18.01■□□□□ 0.47
CTSA-218ENST00000607814 HACL1Q9UJ83 578 aa18.01■□□□□ 0.47
CTSA-218ENST00000607814 RASSF10A6NK89 507 aa18■□□□□ 0.47
CTSA-218ENST00000607814 NPR1P16066 1061 aa18■□□□□ 0.47
CTSA-218ENST00000607814 MAP2K1Q02750 393 aaPredicted RBP18■□□□□ 0.47
CTSA-218ENST00000607814 FKBP4Q02790 459 aaKnown RBP eCLIP18■□□□□ 0.47
CTSA-218ENST00000607814 CACNA1SQ13698 1873 aa18■□□□□ 0.47
CTSA-218ENST00000607814 CEMIPQ8WUJ3 1361 aa18■□□□□ 0.47
CTSA-218ENST00000607814 KLRG2A4D1S0 409 aaPredicted RBP17.99■□□□□ 0.47
CTSA-218ENST00000607814 RGL2O15211 777 aa17.99■□□□□ 0.47
CTSA-218ENST00000607814 NEFMP07197 916 aa17.99■□□□□ 0.47
CTSA-218ENST00000607814 LBX1P52954 281 aa17.99■□□□□ 0.47
CTSA-218ENST00000607814 DEFB115Q30KQ5 88 aa17.99■□□□□ 0.47
CTSA-218ENST00000607814 EAPPQ56P03 285 aaPredicted RBP17.99■□□□□ 0.47
CTSA-218ENST00000607814 RTKN2Q8IZC4 609 aa17.99■□□□□ 0.47
CTSA-218ENST00000607814 RRP7AQ9Y3A4 280 aaKnown RBP17.99■□□□□ 0.47
CTSA-218ENST00000607814 SIPA1L3O60292 1781 aaPredicted RBP17.99■□□□□ 0.47
CTSA-218ENST00000607814 BCORQ6W2J9 1755 aa17.99■□□□□ 0.47
CTSA-218ENST00000607814 ADAMTSL1Q8N6G6 1762 aa17.99■□□□□ 0.47
CTSA-218ENST00000607814 PRAMEF22A3QJZ6 481 aa17.98■□□□□ 0.47
CTSA-218ENST00000607814 EPHX2P34913 555 aa17.98■□□□□ 0.47
CTSA-218ENST00000607814 NFE2L2Q16236 605 aa17.98■□□□□ 0.47
CTSA-218ENST00000607814 NBPF5PQ86XG9 351 aaPredicted RBP17.98■□□□□ 0.47
CTSA-218ENST00000607814 DZIP3Q86Y13 1208 aaKnown RBP17.98■□□□□ 0.47
CTSA-218ENST00000607814 CLEC11AQ9Y240 323 aa17.98■□□□□ 0.47
CTSA-218ENST00000607814 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
CTSA-218ENST00000607814 MAPK8IP3Q9UPT6 1336 aa17.98■□□□□ 0.47
CTSA-218ENST00000607814 A1BGP04217 495 aa17.97■□□□□ 0.47
CTSA-218ENST00000607814 FZD9O00144 591 aa17.96■□□□□ 0.47
CTSA-218ENST00000607814 PIP4K2AP48426 406 aaPredicted RBP17.96■□□□□ 0.47
CTSA-218ENST00000607814 NEUROD2Q15784 382 aa17.96■□□□□ 0.47
CTSA-218ENST00000607814 CCDC184Q52MB2 194 aa17.96■□□□□ 0.47
CTSA-218ENST00000607814 CNTROBQ8N137 903 aa17.96■□□□□ 0.47
CTSA-218ENST00000607814 ABHD8Q96I13 439 aa17.96■□□□□ 0.47
CTSA-218ENST00000607814 ADAMTS8Q9UP79 889 aa17.96■□□□□ 0.47
CTSA-218ENST00000607814 ZNF541Q9H0D2 1346 aa17.96■□□□□ 0.46
CTSA-218ENST00000607814 HSPA8P11142 646 aaKnown RBP17.95■□□□□ 0.46
CTSA-218ENST00000607814 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
CTSA-218ENST00000607814 TPTE2Q6XPS3 522 aa17.95■□□□□ 0.46
CTSA-218ENST00000607814 GPC2Q8N158 579 aa17.95■□□□□ 0.46
CTSA-218ENST00000607814 ZNF277Q9NRM2 450 aaPredicted RBP17.95■□□□□ 0.46
CTSA-218ENST00000607814 USP16Q9Y5T5 823 aa17.95■□□□□ 0.46
CTSA-218ENST00000607814 WDR33Q9C0J8 1336 aaKnown RBP17.95■□□□□ 0.46
CTSA-218ENST00000607814 HTATSF1O43719 755 aaKnown RBP17.94■□□□□ 0.46
CTSA-218ENST00000607814 ALDH1B1P30837 517 aa17.94■□□□□ 0.46
CTSA-218ENST00000607814 RIPK4P57078 832 aa17.94■□□□□ 0.46
CTSA-218ENST00000607814 TAF7Q15545 349 aaPredicted RBP17.94■□□□□ 0.46
CTSA-218ENST00000607814 IARSP41252 1262 aaKnown RBP17.93■□□□□ 0.46
CTSA-218ENST00000607814 PNNQ9H307 717 aaKnown RBP17.93■□□□□ 0.46
CTSA-218ENST00000607814 DLG5Q8TDM6 1919 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms