RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 ZNF790Q6PG37 636 aa18.05■□□□□ 0.48
CTSA-212ENST00000606394 ZNF496Q96IT1 587 aaPredicted RBP18.05■□□□□ 0.48
CTSA-212ENST00000606394 WBP1LQ9NX94 342 aa18.05■□□□□ 0.48
CTSA-212ENST00000606394 TBC1D2BQ9UPU7 963 aa18.05■□□□□ 0.48
CTSA-212ENST00000606394 ITGBL1O95965 494 aaPredicted RBP18.04■□□□□ 0.48
CTSA-212ENST00000606394 VEGFBP49765 207 aa18.04■□□□□ 0.48
CTSA-212ENST00000606394 AMER1Q5JTC6 1135 aaPredicted RBP18.04■□□□□ 0.48
CTSA-212ENST00000606394 HSPA5P11021 654 aaKnown RBP18.03■□□□□ 0.48
CTSA-212ENST00000606394 TEFQ10587 303 aa18.03■□□□□ 0.48
CTSA-212ENST00000606394 C7orf43Q8WVR3 580 aa18.03■□□□□ 0.48
CTSA-212ENST00000606394 DIAPH1O60610 1272 aaKnown RBP18.02■□□□□ 0.48
CTSA-212ENST00000606394 CAMTA2O94983 1202 aa18.02■□□□□ 0.48
CTSA-212ENST00000606394 CCDC93Q567U6 631 aa18.02■□□□□ 0.48
CTSA-212ENST00000606394 CLEC4GQ6UXB4 293 aa18.02■□□□□ 0.48
CTSA-212ENST00000606394 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
CTSA-212ENST00000606394 ZNF330Q9Y3S2 320 aaPredicted RBP18.02■□□□□ 0.48
CTSA-212ENST00000606394 SLC34A2O95436 690 aa18.01■□□□□ 0.47
CTSA-212ENST00000606394 PNMA8AQ86V59 439 aaPredicted RBP18.01■□□□□ 0.47
CTSA-212ENST00000606394 FMNL2Q96PY5 1086 aa18.01■□□□□ 0.47
CTSA-212ENST00000606394 HACL1Q9UJ83 578 aa18.01■□□□□ 0.47
CTSA-212ENST00000606394 RASSF10A6NK89 507 aa18■□□□□ 0.47
CTSA-212ENST00000606394 GNAT3A8MTJ3 354 aa18■□□□□ 0.47
CTSA-212ENST00000606394 NPR1P16066 1061 aa18■□□□□ 0.47
CTSA-212ENST00000606394 MAP2K1Q02750 393 aaPredicted RBP18■□□□□ 0.47
CTSA-212ENST00000606394 FKBP4Q02790 459 aaKnown RBP eCLIP18■□□□□ 0.47
CTSA-212ENST00000606394 GAS2L2Q8NHY3 880 aa18■□□□□ 0.47
CTSA-212ENST00000606394 CACNA1SQ13698 1873 aa18■□□□□ 0.47
CTSA-212ENST00000606394 KLRG2A4D1S0 409 aaPredicted RBP17.99■□□□□ 0.47
CTSA-212ENST00000606394 ZNF316A6NFI3 1004 aaPredicted RBP17.99■□□□□ 0.47
CTSA-212ENST00000606394 RGL2O15211 777 aa17.99■□□□□ 0.47
CTSA-212ENST00000606394 LBX1P52954 281 aa17.99■□□□□ 0.47
CTSA-212ENST00000606394 DEFB115Q30KQ5 88 aa17.99■□□□□ 0.47
CTSA-212ENST00000606394 EAPPQ56P03 285 aaPredicted RBP17.99■□□□□ 0.47
CTSA-212ENST00000606394 RTKN2Q8IZC4 609 aa17.99■□□□□ 0.47
CTSA-212ENST00000606394 IL17REQ8NFR9 667 aa17.99■□□□□ 0.47
CTSA-212ENST00000606394 SIPA1L3O60292 1781 aaPredicted RBP17.99■□□□□ 0.47
CTSA-212ENST00000606394 BCORQ6W2J9 1755 aa17.99■□□□□ 0.47
CTSA-212ENST00000606394 ADAMTSL1Q8N6G6 1762 aa17.99■□□□□ 0.47
CTSA-212ENST00000606394 EPHX2P34913 555 aa17.98■□□□□ 0.47
CTSA-212ENST00000606394 NBPF5PQ86XG9 351 aaPredicted RBP17.98■□□□□ 0.47
CTSA-212ENST00000606394 DZIP3Q86Y13 1208 aaKnown RBP17.98■□□□□ 0.47
CTSA-212ENST00000606394 CLEC11AQ9Y240 323 aa17.98■□□□□ 0.47
CTSA-212ENST00000606394 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
CTSA-212ENST00000606394 A1BGP04217 495 aa17.97■□□□□ 0.47
CTSA-212ENST00000606394 CEMIPQ8WUJ3 1361 aa17.96■□□□□ 0.47
CTSA-212ENST00000606394 FZD9O00144 591 aa17.96■□□□□ 0.47
CTSA-212ENST00000606394 CNTROBQ8N137 903 aa17.96■□□□□ 0.47
CTSA-212ENST00000606394 ABHD8Q96I13 439 aa17.96■□□□□ 0.47
CTSA-212ENST00000606394 ZNF541Q9H0D2 1346 aa17.96■□□□□ 0.46
CTSA-212ENST00000606394 HSPA8P11142 646 aaKnown RBP17.95■□□□□ 0.46
CTSA-212ENST00000606394 TPTE2Q6XPS3 522 aa17.95■□□□□ 0.46
CTSA-212ENST00000606394 GPC2Q8N158 579 aa17.95■□□□□ 0.46
CTSA-212ENST00000606394 ZNF277Q9NRM2 450 aaPredicted RBP17.95■□□□□ 0.46
CTSA-212ENST00000606394 WDR33Q9C0J8 1336 aaKnown RBP17.95■□□□□ 0.46
CTSA-212ENST00000606394 ALDH1B1P30837 517 aa17.94■□□□□ 0.46
CTSA-212ENST00000606394 BTBD11A6QL63 1104 aa17.93■□□□□ 0.46
CTSA-212ENST00000606394 IARSP41252 1262 aaKnown RBP17.93■□□□□ 0.46
CTSA-212ENST00000606394 RNF123Q5XPI4 1314 aa17.93■□□□□ 0.46
CTSA-212ENST00000606394 MAP1SQ66K74 1059 aaPredicted RBP17.92■□□□□ 0.46
CTSA-212ENST00000606394 PSMD1Q99460 953 aa17.92■□□□□ 0.46
CTSA-212ENST00000606394 ABT1Q9ULW3 272 aaKnown RBP17.92■□□□□ 0.46
CTSA-212ENST00000606394 FAM161AQ3B820 660 aa17.91■□□□□ 0.46
CTSA-212ENST00000606394 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
CTSA-212ENST00000606394 JDP2Q8WYK2 163 aa17.91■□□□□ 0.46
CTSA-212ENST00000606394 DDX21Q9NR30 783 aaKnown RBP eCLIP17.91■□□□□ 0.46
CTSA-212ENST00000606394 USP16Q9Y5T5 823 aa17.91■□□□□ 0.46
CTSA-212ENST00000606394 COL3A1P02461 1466 aaPredicted RBP17.9■□□□□ 0.46
CTSA-212ENST00000606394 PER1O15534 1290 aaPredicted RBP17.9■□□□□ 0.46
CTSA-212ENST00000606394 ECE1P42892 770 aa17.9■□□□□ 0.46
CTSA-212ENST00000606394 GRIPAP1Q4V328 841 aa17.9■□□□□ 0.46
CTSA-212ENST00000606394 CC2D2BQ6DHV5 1058 aa17.9■□□□□ 0.46
CTSA-212ENST00000606394 SYNE4Q8N205 404 aa17.9■□□□□ 0.46
CTSA-212ENST00000606394 BEGAINQ9BUH8 593 aa17.9■□□□□ 0.46
CTSA-212ENST00000606394 THSD7BQ9C0I4 1608 aa17.9■□□□□ 0.46
CTSA-212ENST00000606394 U2SURPO15042 1029 aaKnown RBP17.89■□□□□ 0.45
CTSA-212ENST00000606394 SNRPA1P09661 255 aaKnown RBP17.89■□□□□ 0.45
CTSA-212ENST00000606394 RGS19P49795 217 aa17.89■□□□□ 0.45
CTSA-212ENST00000606394 NIP7Q9Y221 180 aaKnown RBP eCLIP17.89■□□□□ 0.45
CTSA-212ENST00000606394 SNED1Q8TER0 1413 aa17.89■□□□□ 0.45
CTSA-212ENST00000606394 LMOD1P29536 600 aaPredicted RBP17.88■□□□□ 0.45
CTSA-212ENST00000606394 EIF6P56537 245 aaKnown RBP17.88■□□□□ 0.45
CTSA-212ENST00000606394 KCNQ3O43525 872 aa17.87■□□□□ 0.45
CTSA-212ENST00000606394 MLLT1Q03111 559 aaPredicted RBP17.87■□□□□ 0.45
CTSA-212ENST00000606394 CRY2Q49AN0 593 aa17.87■□□□□ 0.45
CTSA-212ENST00000606394 OLFM4Q6UX06 510 aa17.87■□□□□ 0.45
CTSA-212ENST00000606394 NPC1L1Q9UHC9 1359 aa17.87■□□□□ 0.45
CTSA-212ENST00000606394 CAPNS2Q96L46 248 aa17.86■□□□□ 0.45
CTSA-212ENST00000606394 PCDH10Q9P2E7 1040 aa17.86■□□□□ 0.45
CTSA-212ENST00000606394 KIF7Q2M1P5 1343 aa17.86■□□□□ 0.45
CTSA-212ENST00000606394 GTF2E1P29083 439 aaPredicted RBP17.85■□□□□ 0.45
CTSA-212ENST00000606394 MAP2K2P36507 400 aa17.85■□□□□ 0.45
CTSA-212ENST00000606394 PIP4K2AP48426 406 aaPredicted RBP17.85■□□□□ 0.45
CTSA-212ENST00000606394 CC2D1BQ5T0F9 858 aaKnown RBP17.85■□□□□ 0.45
CTSA-212ENST00000606394 USP50Q70EL3 339 aaPredicted RBP17.85■□□□□ 0.45
CTSA-212ENST00000606394 GPR101Q96P66 508 aaPredicted RBP17.85■□□□□ 0.45
CTSA-212ENST00000606394 NYXQ9GZU5 481 aa17.85■□□□□ 0.45
CTSA-212ENST00000606394 CA12O43570 354 aa17.84■□□□□ 0.45
CTSA-212ENST00000606394 PRAMEF22A3QJZ6 481 aa17.83■□□□□ 0.44
CTSA-212ENST00000606394 NBPF26B4DH59 902 aa17.83■□□□□ 0.44
CTSA-212ENST00000606394 HOXA10P31260 410 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms