RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 SARNPP82979 210 aaKnown RBP6.99□□□□□ -1.29
COL4A3BP-207ENST00000604926 PLEKHG6Q3KR16 790 aa6.99□□□□□ -1.29
COL4A3BP-207ENST00000604926 ANKRD13BQ86YJ7 626 aa6.99□□□□□ -1.29
COL4A3BP-207ENST00000604926 DRC7Q8IY82 874 aa6.99□□□□□ -1.29
COL4A3BP-207ENST00000604926 MYO1HQ8N1T3 1032 aa6.99□□□□□ -1.29
COL4A3BP-207ENST00000604926 FAM212AQ96EL1 285 aa6.99□□□□□ -1.29
COL4A3BP-207ENST00000604926 DDX27Q96GQ7 796 aaKnown RBP6.99□□□□□ -1.29
COL4A3BP-207ENST00000604926 CCDC34Q96HJ3 373 aa6.99□□□□□ -1.29
COL4A3BP-207ENST00000604926 RWDD1Q9H446 243 aaPredicted RBP6.99□□□□□ -1.29
COL4A3BP-207ENST00000604926 CD248Q9HCU0 757 aa6.99□□□□□ -1.29
COL4A3BP-207ENST00000604926 GJA3Q9Y6H8 435 aa6.99□□□□□ -1.29
COL4A3BP-207ENST00000604926 NEXMIFQ5QGS0 1516 aa6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 TNNT3P45378 269 aaPredicted RBP6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 ALDH1L2Q3SY69 923 aa6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 RPUSD2Q8IZ73 545 aaKnown RBP6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 NEK9Q8TD19 979 aa6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 ITM2BQ9Y287 266 aa6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 DNMT1P26358 1616 aaKnown RBP6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 ATP7AQ04656 1500 aa6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 KIF5CO60282 957 aa6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 NEFHP12036 1026 aa6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 PTK7Q13308 1070 aa6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 LSM14AQ8ND56 463 aaKnown RBP6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 MPHOSPH6Q99547 160 aaKnown RBP6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 USP25Q9UHP3 1055 aa6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 KIAA1107Q9UPP5 1409 aa6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 USP54Q70EL1 1684 aa6.98□□□□□ -1.29
COL4A3BP-207ENST00000604926 BOLA2-SMG1P6H3BVE0 249 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 ATXN8OSP0DMR3 200 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 PDE4DQ08499 809 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 DHX8Q14562 1220 aaKnown RBP6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 FXNQ16595 210 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 MAP9Q49MG5 647 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 C10orf62Q5T681 223 aaPredicted RBP6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 PCGF5Q86SE9 256 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 CCAR1Q8IX12 1150 aaKnown RBP6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 SLF2Q8IX21 1173 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 ARL10Q8N8L6 244 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 CERKQ8TCT0 537 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 GOLGA6L22H0YM25 854 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 TSNAXIP1Q2TAA8 658 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 EFCAB2Q5VUJ9 269 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 CHCHD4Q8N4Q1 142 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 SMCR8Q8TEV9 937 aaPredicted RBP6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 CCP110O43303 1012 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 MTA2O94776 668 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 ZBED6P86452 979 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 SLC7A5Q01650 507 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 WASHC5Q12768 1159 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 ENOX2Q16206 610 aaKnown RBP6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 LMBRD2Q68DH5 695 aaPredicted RBP6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 SDE2Q6IQ49 451 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 TRIM74Q86UV6 250 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 TRIM73Q86UV7 250 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 STAG2Q8N3U4 1231 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 AGAP3Q96P47 875 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 TSPYL2Q9H2G4 693 aaPredicted RBP6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 SPC25Q9HBM1 224 aa6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 UTP6Q9NYH9 597 aaKnown RBP6.97□□□□□ -1.29
COL4A3BP-207ENST00000604926 CLK1P49759 484 aaKnown RBP6.96□□□□□ -1.29
COL4A3BP-207ENST00000604926 FAM160A1Q05DH4 1040 aa6.96□□□□□ -1.29
COL4A3BP-207ENST00000604926 UBE2Q1Q7Z7E8 422 aa6.96□□□□□ -1.29
COL4A3BP-207ENST00000604926 FAM184AQ8NB25 1140 aa6.96□□□□□ -1.29
COL4A3BP-207ENST00000604926 GIPC2Q8TF65 315 aa6.96□□□□□ -1.29
COL4A3BP-207ENST00000604926 NUP153P49790 1475 aaKnown RBP6.96□□□□□ -1.29
COL4A3BP-207ENST00000604926 ZNF518AQ6AHZ1 1483 aa6.96□□□□□ -1.29
COL4A3BP-207ENST00000604926 GPATCH8Q9UKJ3 1502 aaKnown RBP6.96□□□□□ -1.3
COL4A3BP-207ENST00000604926 STRCP1A6NGW2 1772 aa6.96□□□□□ -1.3
COL4A3BP-207ENST00000604926 SHTN1A0MZ66 631 aa6.96□□□□□ -1.3
COL4A3BP-207ENST00000604926 ZNF132P52740 706 aa6.96□□□□□ -1.3
COL4A3BP-207ENST00000604926 PMFBP1Q8TBY8 1022 aa6.96□□□□□ -1.3
COL4A3BP-207ENST00000604926 TIGD1Q96MW7 591 aa6.96□□□□□ -1.3
COL4A3BP-207ENST00000604926 TMCC3Q9ULS5 477 aa6.96□□□□□ -1.3
COL4A3BP-207ENST00000604926 ANKRD33BA6NCL7 494 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 NOP2P46087 812 aaKnown RBP6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 PPP2R5AQ15172 486 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 ZSCAN26Q16670 478 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 SPOCK2Q92563 424 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 AK7Q96M32 723 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 ZHX3Q9H4I2 956 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 SENP3Q9H4L4 574 aaPredicted RBP6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 AKAP2Q9Y2D5 859 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 SHANK2Q9UPX8 1470 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 TLDC2A0PJX2 215 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 FOSL1P15407 271 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 BMS1Q14692 1282 aaKnown RBP6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 PPP2R5BQ15173 497 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 TOMM20Q15388 145 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 HSP90B2PQ58FF3 399 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 WAPLQ7Z5K2 1190 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 TRIML1Q8N9V2 468 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 POLR3CQ9BUI4 534 aaPredicted RBP6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 THRAP3Q9Y2W1 955 aaKnown RBP6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 HTATSF1O43719 755 aaKnown RBP6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 TPPPO94811 219 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 SETSIPP0DME0 302 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 INF2Q27J81 1249 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 KIAA1211Q6ZU35 1233 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 CATIPQ7Z7H3 387 aa6.95□□□□□ -1.3
COL4A3BP-207ENST00000604926 KIAA1958Q8N8K9 716 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms