RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 LINC00116Q8NCU8 138 aa21.82■■□□□ 1.08
PPFIA3-207ENST00000602716 RREB1Q92766 1687 aa21.82■■□□□ 1.08
PPFIA3-207ENST00000602716 IGKV5-2P06315 115 aa21.82■■□□□ 1.08
PPFIA3-207ENST00000602716 CRKLP46109 303 aaKnown RBP21.82■■□□□ 1.08
PPFIA3-207ENST00000602716 INTS5Q6P9B9 1019 aaKnown RBP21.82■■□□□ 1.08
PPFIA3-207ENST00000602716 ANKRD13DQ6ZTN6 518 aa21.82■■□□□ 1.08
PPFIA3-207ENST00000602716 FAM196AQ6ZSG2 479 aa21.81■■□□□ 1.08
PPFIA3-207ENST00000602716 ZBTB3Q9H5J0 574 aa21.81■■□□□ 1.08
PPFIA3-207ENST00000602716 TRIM37O94972 964 aa21.8■■□□□ 1.08
PPFIA3-207ENST00000602716 SIRT2Q8IXJ6 389 aa21.8■■□□□ 1.08
PPFIA3-207ENST00000602716 BCL11BQ9C0K0 894 aaPredicted RBP21.8■■□□□ 1.08
PPFIA3-207ENST00000602716 USP44Q9H0E7 712 aa21.8■■□□□ 1.08
PPFIA3-207ENST00000602716 ZNF831Q5JPB2 1677 aa21.8■■□□□ 1.08
PPFIA3-207ENST00000602716 MYD88Q99836 296 aa21.8■■□□□ 1.08
PPFIA3-207ENST00000602716 PLBD2Q8NHP8 589 aa21.79■■□□□ 1.08
PPFIA3-207ENST00000602716 CCDC87Q9NVE4 849 aa21.79■■□□□ 1.08
PPFIA3-207ENST00000602716 LY75O60449 1722 aa21.79■■□□□ 1.08
PPFIA3-207ENST00000602716 METTL22Q9BUU2 404 aaPredicted RBP21.79■■□□□ 1.08
PPFIA3-207ENST00000602716 MYH14Q7Z406 1995 aaKnown RBP21.78■■□□□ 1.08
PPFIA3-207ENST00000602716 CENPQQ7L2Z9 268 aaPredicted RBP21.78■■□□□ 1.08
PPFIA3-207ENST00000602716 ATP5J2-PTCD1G3V325 749 aa21.77■■□□□ 1.08
PPFIA3-207ENST00000602716 NBPF7P0C2Y1 421 aaPredicted RBP21.77■■□□□ 1.08
PPFIA3-207ENST00000602716 LINS1Q8NG48 757 aa21.77■■□□□ 1.08
PPFIA3-207ENST00000602716 SMIM5Q71RC9 77 aa21.77■■□□□ 1.07
PPFIA3-207ENST00000602716 CCNL1Q9UK58 526 aaPredicted RBP21.76■■□□□ 1.07
PPFIA3-207ENST00000602716 NEURL1BA8MQ27 555 aa21.75■■□□□ 1.07
PPFIA3-207ENST00000602716 CEP85Q6P2H3 762 aa21.75■■□□□ 1.07
PPFIA3-207ENST00000602716 CHMP4BQ9H444 224 aaKnown RBP21.75■■□□□ 1.07
PPFIA3-207ENST00000602716 ALDH1L1O75891 902 aa21.75■■□□□ 1.07
PPFIA3-207ENST00000602716 HDAC1Q13547 482 aaPredicted RBP21.75■■□□□ 1.07
PPFIA3-207ENST00000602716 LRRFIP2Q9Y608 721 aaKnown RBP21.75■■□□□ 1.07
PPFIA3-207ENST00000602716 PDE4AP27815 886 aa21.74■■□□□ 1.07
PPFIA3-207ENST00000602716 IL6STP40189 918 aaPredicted RBP21.74■■□□□ 1.07
PPFIA3-207ENST00000602716 EIF5P55010 431 aaKnown RBP21.74■■□□□ 1.07
PPFIA3-207ENST00000602716 LRRC4BQ9NT99 713 aa21.74■■□□□ 1.07
PPFIA3-207ENST00000602716 ARXQ96QS3 562 aa21.73■■□□□ 1.07
PPFIA3-207ENST00000602716 GNAI3P08754 354 aa21.73■■□□□ 1.07
PPFIA3-207ENST00000602716 UBTFL1P0CB47 393 aaPredicted RBP21.73■■□□□ 1.07
PPFIA3-207ENST00000602716 HLFQ16534 295 aa21.73■■□□□ 1.07
PPFIA3-207ENST00000602716 AMIGO3Q86WK7 504 aa21.73■■□□□ 1.07
PPFIA3-207ENST00000602716 JARID2Q92833 1246 aaPredicted RBP21.73■■□□□ 1.07
PPFIA3-207ENST00000602716 BACH2Q9BYV9 841 aa21.73■■□□□ 1.07
PPFIA3-207ENST00000602716 TBC1D2BQ9UPU7 963 aa21.73■■□□□ 1.07
PPFIA3-207ENST00000602716 MAP3K15Q6ZN16 1313 aa21.73■■□□□ 1.07
PPFIA3-207ENST00000602716 GNAI2P04899 355 aa21.72■■□□□ 1.07
PPFIA3-207ENST00000602716 NEXNQ0ZGT2 675 aa21.72■■□□□ 1.07
PPFIA3-207ENST00000602716 ILDR1Q86SU0 546 aaPredicted RBP21.72■■□□□ 1.07
PPFIA3-207ENST00000602716 ANKRD44Q8N8A2 993 aa21.72■■□□□ 1.07
PPFIA3-207ENST00000602716 RWDD1Q9H446 243 aaPredicted RBP21.72■■□□□ 1.07
PPFIA3-207ENST00000602716 GCKRQ14397 625 aa21.72■■□□□ 1.07
PPFIA3-207ENST00000602716 CNTNAP4Q9C0A0 1308 aa21.71■■□□□ 1.07
PPFIA3-207ENST00000602716 KIF6Q6ZMV9 814 aa21.71■■□□□ 1.07
PPFIA3-207ENST00000602716 ZBTB47Q9UFB7 747 aaPredicted RBP21.71■■□□□ 1.07
PPFIA3-207ENST00000602716 AFDNP55196 1824 aaKnown RBP21.71■■□□□ 1.07
PPFIA3-207ENST00000602716 COL15A1P39059 1388 aa21.71■■□□□ 1.07
PPFIA3-207ENST00000602716 GRM8O00222 908 aa21.7■■□□□ 1.06
PPFIA3-207ENST00000602716 DZIP3Q86Y13 1208 aaKnown RBP21.7■■□□□ 1.06
PPFIA3-207ENST00000602716 TAF1LQ8IZX4 1826 aa21.7■■□□□ 1.06
PPFIA3-207ENST00000602716 PNMA6EA0A0J9YXQ4 647 aa21.69■■□□□ 1.06
PPFIA3-207ENST00000602716 KAZALD1Q96I82 304 aa21.69■■□□□ 1.06
PPFIA3-207ENST00000602716 SUCLG2Q96I99 432 aa21.69■■□□□ 1.06
PPFIA3-207ENST00000602716 C9orf78Q9NZ63 289 aaPredicted RBP21.69■■□□□ 1.06
PPFIA3-207ENST00000602716 C4BP0C0L5 1744 aa21.69■■□□□ 1.06
PPFIA3-207ENST00000602716 UTYO14607 1347 aa21.68■■□□□ 1.06
PPFIA3-207ENST00000602716 TNS1Q9HBL0 1735 aaKnown RBP21.68■■□□□ 1.06
PPFIA3-207ENST00000602716 ISCA1Q9BUE6 129 aa21.67■■□□□ 1.06
PPFIA3-207ENST00000602716 CAMTA2O94983 1202 aa21.67■■□□□ 1.06
PPFIA3-207ENST00000602716 TCIRG1Q13488 830 aa21.67■■□□□ 1.06
PPFIA3-207ENST00000602716 GIGYF2Q6Y7W6 1299 aaKnown RBP21.67■■□□□ 1.06
PPFIA3-207ENST00000602716 SMC5Q8IY18 1101 aa21.67■■□□□ 1.06
PPFIA3-207ENST00000602716 PROM2Q8N271 834 aa21.67■■□□□ 1.06
PPFIA3-207ENST00000602716 IBTKQ9P2D0 1353 aaPredicted RBP21.66■■□□□ 1.06
PPFIA3-207ENST00000602716 GNPATO15228 680 aa21.66■■□□□ 1.06
PPFIA3-207ENST00000602716 GPTP24298 496 aa21.66■■□□□ 1.06
PPFIA3-207ENST00000602716 RPAP2Q8IXW5 612 aaPredicted RBP21.66■■□□□ 1.06
PPFIA3-207ENST00000602716 CASP7P55210 303 aa21.65■■□□□ 1.06
PPFIA3-207ENST00000602716 RTL5Q5HYW3 569 aaPredicted RBP21.65■■□□□ 1.06
PPFIA3-207ENST00000602716 EPHA10Q5JZY3 1008 aa21.65■■□□□ 1.06
PPFIA3-207ENST00000602716 UBE3BQ7Z3V4 1068 aa21.65■■□□□ 1.06
PPFIA3-207ENST00000602716 PDZRN3Q9UPQ7 1066 aa21.65■■□□□ 1.06
PPFIA3-207ENST00000602716 UBN2Q6ZU65 1347 aa21.64■■□□□ 1.06
PPFIA3-207ENST00000602716 A0A087WZG4 1122 aa21.64■■□□□ 1.05
PPFIA3-207ENST00000602716 CWC25Q9NXE8 425 aaPredicted RBP21.64■■□□□ 1.05
PPFIA3-207ENST00000602716 BCORQ6W2J9 1755 aa21.64■■□□□ 1.05
PPFIA3-207ENST00000602716 RC3H1Q5TC82 1133 aaKnown RBP21.63■■□□□ 1.05
PPFIA3-207ENST00000602716 APBA3O96018 575 aa21.63■■□□□ 1.05
PPFIA3-207ENST00000602716 ATP8B2P98198 1209 aa21.63■■□□□ 1.05
PPFIA3-207ENST00000602716 TXNRD1Q16881 649 aa21.63■■□□□ 1.05
PPFIA3-207ENST00000602716 BICC1Q9H694 974 aaKnown RBP21.63■■□□□ 1.05
PPFIA3-207ENST00000602716 ANKRD36CQ5JPF3 1778 aa21.63■■□□□ 1.05
PPFIA3-207ENST00000602716 SCN7AQ01118 1682 aa21.62■■□□□ 1.05
PPFIA3-207ENST00000602716 ERVV-1B6SEH8 477 aa21.62■■□□□ 1.05
PPFIA3-207ENST00000602716 PPP1R42Q7Z4L9 355 aa21.62■■□□□ 1.05
PPFIA3-207ENST00000602716 NPM2Q86SE8 214 aaKnown RBP21.62■■□□□ 1.05
PPFIA3-207ENST00000602716 NUP98P52948 1817 aa21.62■■□□□ 1.05
PPFIA3-207ENST00000602716 RPS6KA4O75676 772 aa21.62■■□□□ 1.05
PPFIA3-207ENST00000602716 CCDC191Q8NCU4 936 aa21.62■■□□□ 1.05
PPFIA3-207ENST00000602716 BCL11AQ9H165 835 aa21.62■■□□□ 1.05
PPFIA3-207ENST00000602716 RGS3P49796 1198 aa21.61■■□□□ 1.05
PPFIA3-207ENST00000602716 NBR1Q14596 966 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms