RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 NEXNQ0ZGT2 675 aa17.17■□□□□ 0.34
IRF3-229ENST00000601373 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
IRF3-229ENST00000601373 ANKRD44Q8N8A2 993 aa17.17■□□□□ 0.34
IRF3-229ENST00000601373 LINS1Q8NG48 757 aa17.17■□□□□ 0.34
IRF3-229ENST00000601373 GCC1Q96CN9 775 aa17.17■□□□□ 0.34
IRF3-229ENST00000601373 ACSBG1Q96GR2 724 aa17.17■□□□□ 0.34
IRF3-229ENST00000601373 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
IRF3-229ENST00000601373 NBPF26B4DH59 902 aa17.16■□□□□ 0.34
IRF3-229ENST00000601373 NBPF10Q6P3W6 841 aaKnown RBP17.16■□□□□ 0.34
IRF3-229ENST00000601373 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
IRF3-229ENST00000601373 NBPF15Q8N660 670 aa17.16■□□□□ 0.34
IRF3-229ENST00000601373 USP44Q9H0E7 712 aa17.16■□□□□ 0.34
IRF3-229ENST00000601373 NUP188Q5SRE5 1749 aa17.16■□□□□ 0.34
IRF3-229ENST00000601373 HMMRO75330 724 aa17.15■□□□□ 0.34
IRF3-229ENST00000601373 A1BGP04217 495 aa17.15■□□□□ 0.34
IRF3-229ENST00000601373 UBTFL1P0CB47 393 aaPredicted RBP17.15■□□□□ 0.34
IRF3-229ENST00000601373 PLBD2Q8NHP8 589 aa17.15■□□□□ 0.34
IRF3-229ENST00000601373 METTL22Q9BUU2 404 aaPredicted RBP17.15■□□□□ 0.34
IRF3-229ENST00000601373 PLSCR1O15162 318 aa17.14■□□□□ 0.33
IRF3-229ENST00000601373 CEP85Q6P2H3 762 aa17.14■□□□□ 0.33
IRF3-229ENST00000601373 CYP19A1P11511 503 aaPredicted RBP17.13■□□□□ 0.33
IRF3-229ENST00000601373 SIRT2Q8IXJ6 389 aa17.13■□□□□ 0.33
IRF3-229ENST00000601373 PDZRN3Q9UPQ7 1066 aa17.13■□□□□ 0.33
IRF3-229ENST00000601373 ATP8B2P98198 1209 aa17.12■□□□□ 0.33
IRF3-229ENST00000601373 SLC4A9Q96Q91 983 aa17.12■□□□□ 0.33
IRF3-229ENST00000601373 C9orf78Q9NZ63 289 aaPredicted RBP17.12■□□□□ 0.33
IRF3-229ENST00000601373 LOC102724428A0A0B4J2F2 783 aa17.11■□□□□ 0.33
IRF3-229ENST00000601373 PIP4K2AP48426 406 aaPredicted RBP17.11■□□□□ 0.33
IRF3-229ENST00000601373 SIK1P57059 783 aa17.11■□□□□ 0.33
IRF3-229ENST00000601373 DCTPP1Q9H773 170 aa17.11■□□□□ 0.33
IRF3-229ENST00000601373 PALLDQ8WX93 1383 aa17.11■□□□□ 0.33
IRF3-229ENST00000601373 ATP6V1AP38606 617 aa17.1■□□□□ 0.33
IRF3-229ENST00000601373 MYD88Q99836 296 aa17.1■□□□□ 0.33
IRF3-229ENST00000601373 UTYO14607 1347 aa17.1■□□□□ 0.33
IRF3-229ENST00000601373 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
IRF3-229ENST00000601373 NPM2Q86SE8 214 aaKnown RBP17.09■□□□□ 0.33
IRF3-229ENST00000601373 LRRFIP2Q9Y608 721 aaKnown RBP17.09■□□□□ 0.33
IRF3-229ENST00000601373 RGPD3A6NKT7 1758 aaPredicted RBP17.09■□□□□ 0.33
IRF3-229ENST00000601373 RGPD4Q7Z3J3 1758 aa17.09■□□□□ 0.33
IRF3-229ENST00000601373 GRM8O00222 908 aa17.08■□□□□ 0.32
IRF3-229ENST00000601373 IGKV5-2P06315 115 aa17.08■□□□□ 0.32
IRF3-229ENST00000601373 IL6STP40189 918 aaPredicted RBP17.08■□□□□ 0.32
IRF3-229ENST00000601373 NUCB1Q02818 461 aa17.08■□□□□ 0.32
IRF3-229ENST00000601373 CWF19L2Q2TBE0 894 aaKnown RBP17.08■□□□□ 0.32
IRF3-229ENST00000601373 KIF6Q6ZMV9 814 aa17.08■□□□□ 0.32
IRF3-229ENST00000601373 TTLL7Q6ZT98 887 aa17.08■□□□□ 0.32
IRF3-229ENST00000601373 CICQ96RK0 1608 aaPredicted RBP17.07■□□□□ 0.32
IRF3-229ENST00000601373 NBPF7P0C2Y1 421 aaPredicted RBP17.07■□□□□ 0.32
IRF3-229ENST00000601373 RGS3P49796 1198 aa17.07■□□□□ 0.32
IRF3-229ENST00000601373 GCKRQ14397 625 aa17.07■□□□□ 0.32
IRF3-229ENST00000601373 BCL11BQ9C0K0 894 aaPredicted RBP17.07■□□□□ 0.32
IRF3-229ENST00000601373 ZBTB47Q9UFB7 747 aaPredicted RBP17.07■□□□□ 0.32
IRF3-229ENST00000601373 TJP1Q07157 1748 aa17.07■□□□□ 0.32
IRF3-229ENST00000601373 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
IRF3-229ENST00000601373 CHD1LQ86WJ1 897 aa17.06■□□□□ 0.32
IRF3-229ENST00000601373 CCDC87Q9NVE4 849 aa17.06■□□□□ 0.32
IRF3-229ENST00000601373 ARFGEF2Q9Y6D5 1785 aa17.06■□□□□ 0.32
IRF3-229ENST00000601373 NHSQ6T4R5 1651 aa17.06■□□□□ 0.32
IRF3-229ENST00000601373 MTX1Q13505 466 aa17.05■□□□□ 0.32
IRF3-229ENST00000601373 HSP90AB3PQ58FF7 597 aa17.05■□□□□ 0.32
IRF3-229ENST00000601373 ANKRD45Q5TZF3 282 aa17.05■□□□□ 0.32
IRF3-229ENST00000601373 CCDC191Q8NCU4 936 aa17.05■□□□□ 0.32
IRF3-229ENST00000601373 TSHZ2Q9NRE2 1034 aa17.05■□□□□ 0.32
IRF3-229ENST00000601373 ZBTB1Q9Y2K1 713 aa17.05■□□□□ 0.32
IRF3-229ENST00000601373 MAP3K15Q6ZN16 1313 aa17.04■□□□□ 0.32
IRF3-229ENST00000601373 ERVV-1B6SEH8 477 aa17.04■□□□□ 0.32
IRF3-229ENST00000601373 TRIM28Q13263 835 aaKnown RBP17.04■□□□□ 0.32
IRF3-229ENST00000601373 TCIRG1Q13488 830 aa17.04■□□□□ 0.32
IRF3-229ENST00000601373 SSH3Q8TE77 659 aa17.04■□□□□ 0.32
IRF3-229ENST00000601373 ZBTB3Q9H5J0 574 aa17.04■□□□□ 0.32
IRF3-229ENST00000601373 CRKLP46109 303 aaKnown RBP17.03■□□□□ 0.32
IRF3-229ENST00000601373 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
IRF3-229ENST00000601373 ITPK1Q13572 414 aa17.03■□□□□ 0.32
IRF3-229ENST00000601373 INTS5Q6P9B9 1019 aaKnown RBP17.03■□□□□ 0.32
IRF3-229ENST00000601373 PPP1R42Q7Z4L9 355 aa17.03■□□□□ 0.32
IRF3-229ENST00000601373 SKAP1Q86WV1 359 aa17.03■□□□□ 0.32
IRF3-229ENST00000601373 CWC25Q9NXE8 425 aaPredicted RBP17.03■□□□□ 0.32
IRF3-229ENST00000601373 ZNF330Q9Y3S2 320 aaPredicted RBP17.03■□□□□ 0.32
IRF3-229ENST00000601373 COL15A1P39059 1388 aa17.02■□□□□ 0.32
IRF3-229ENST00000601373 ATP5J2-PTCD1G3V325 749 aa17.02■□□□□ 0.32
IRF3-229ENST00000601373 POLA2Q14181 598 aa17.02■□□□□ 0.32
IRF3-229ENST00000601373 GIGYF2Q6Y7W6 1299 aaKnown RBP17.02■□□□□ 0.32
IRF3-229ENST00000601373 ISCA1Q9BUE6 129 aa17.02■□□□□ 0.32
IRF3-229ENST00000601373 A0A087WZG4 1122 aa17.01■□□□□ 0.31
IRF3-229ENST00000601373 PNMA6EA0A0J9YXQ4 647 aa17.01■□□□□ 0.31
IRF3-229ENST00000601373 H7C1W4 665 aa17.01■□□□□ 0.31
IRF3-229ENST00000601373 HMGB2P26583 209 aaKnown RBP17.01■□□□□ 0.31
IRF3-229ENST00000601373 HSP90AB4PQ58FF6 505 aa17.01■□□□□ 0.31
IRF3-229ENST00000601373 RC3H1Q5TC82 1133 aaKnown RBP17.01■□□□□ 0.31
IRF3-229ENST00000601373 LNPKQ9C0E8 428 aa17.01■□□□□ 0.31
IRF3-229ENST00000601373 BTAF1O14981 1849 aa17■□□□□ 0.31
IRF3-229ENST00000601373 SBF2Q86WG5 1849 aa17■□□□□ 0.31
IRF3-229ENST00000601373 SRGAP3O43295 1099 aa17■□□□□ 0.31
IRF3-229ENST00000601373 RAB11FIP3O75154 756 aa17■□□□□ 0.31
IRF3-229ENST00000601373 DZIP3Q86Y13 1208 aaKnown RBP17■□□□□ 0.31
IRF3-229ENST00000601373 SUCLG2Q96I99 432 aa17■□□□□ 0.31
IRF3-229ENST00000601373 ARXQ96QS3 562 aa17■□□□□ 0.31
IRF3-229ENST00000601373 ANO8Q9HCE9 1232 aaPredicted RBP17■□□□□ 0.31
IRF3-229ENST00000601373 AFDNP55196 1824 aaKnown RBP17■□□□□ 0.31
IRF3-229ENST00000601373 CNTNAP4Q9C0A0 1308 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms