RNA–Protein interactions for RNA: ENST00000600703.5

ZNF350-208, Transcript of zinc finger protein 350, human

TSL 4

Gene ZNF350, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF350-208	ENST00000600703	RTF1	Q92541	710 aa	Known RBP	13.62	□□□□□ -0.23
ZNF350-208	ENST00000600703	NUDC	Q9Y266	331 aa		13.62	□□□□□ -0.23
ZNF350-208	ENST00000600703	RGL2	O15211	777 aa		13.61	□□□□□ -0.23
ZNF350-208	ENST00000600703	PER1	O15534	1290 aa	Predicted RBP	13.61	□□□□□ -0.23
ZNF350-208	ENST00000600703	RTKN2	Q8IZC4	609 aa		13.61	□□□□□ -0.23
ZNF350-208	ENST00000600703	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.61	□□□□□ -0.23
ZNF350-208	ENST00000600703	NPC1L1	Q9UHC9	1359 aa		13.6	□□□□□ -0.23
ZNF350-208	ENST00000600703	TMEM88B	A6NKF7	163 aa		13.6	□□□□□ -0.23
ZNF350-208	ENST00000600703	SNRPA1	P09661	255 aa	Known RBP	13.6	□□□□□ -0.23
ZNF350-208	ENST00000600703	GTF2E1	P29083	439 aa	Predicted RBP	13.6	□□□□□ -0.23
ZNF350-208	ENST00000600703	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
ZNF350-208	ENST00000600703	PNMA8A	Q86V59	439 aa	Predicted RBP	13.6	□□□□□ -0.23
ZNF350-208	ENST00000600703	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.6	□□□□□ -0.23
ZNF350-208	ENST00000600703	HACL1	Q9UJ83	578 aa		13.6	□□□□□ -0.23
ZNF350-208	ENST00000600703	CNTNAP1	P78357	1384 aa		13.59	□□□□□ -0.23
ZNF350-208	ENST00000600703	CEMIP	Q8WUJ3	1361 aa		13.59	□□□□□ -0.23
ZNF350-208	ENST00000600703	SBF1	O95248	1867 aa		13.59	□□□□□ -0.23
ZNF350-208	ENST00000600703	DLEC1	Q9Y238	1755 aa		13.59	□□□□□ -0.23
ZNF350-208	ENST00000600703	ALDH1B1	P30837	517 aa		13.59	□□□□□ -0.23
ZNF350-208	ENST00000600703	EAPP	Q56P03	285 aa	Predicted RBP	13.59	□□□□□ -0.23
ZNF350-208	ENST00000600703	PRDM10	Q9NQV6	1147 aa		13.59	□□□□□ -0.23
ZNF350-208	ENST00000600703	CLEC11A	Q9Y240	323 aa		13.59	□□□□□ -0.23
ZNF350-208	ENST00000600703	TIAM2	Q8IVF5	1701 aa		13.59	□□□□□ -0.23
ZNF350-208	ENST00000600703	AFDN	P55196	1824 aa	Known RBP	13.58	□□□□□ -0.24
ZNF350-208	ENST00000600703	POTEI	P0CG38	1075 aa		13.58	□□□□□ -0.24
ZNF350-208	ENST00000600703	POTEJ	P0CG39	1038 aa		13.58	□□□□□ -0.24
ZNF350-208	ENST00000600703	PRKAR2B	P31323	418 aa		13.58	□□□□□ -0.24
ZNF350-208	ENST00000600703	CTCF	P49711	727 aa	Predicted RBP	13.58	□□□□□ -0.24
ZNF350-208	ENST00000600703	CNGB1	Q14028	1251 aa	Predicted RBP	13.58	□□□□□ -0.24
ZNF350-208	ENST00000600703	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
ZNF350-208	ENST00000600703	USP16	Q9Y5T5	823 aa		13.58	□□□□□ -0.24
ZNF350-208	ENST00000600703	PASK	Q96RG2	1323 aa		13.58	□□□□□ -0.24
ZNF350-208	ENST00000600703	C7orf43	Q8WVR3	580 aa		13.57	□□□□□ -0.24
ZNF350-208	ENST00000600703	JDP2	Q8WYK2	163 aa		13.57	□□□□□ -0.24
ZNF350-208	ENST00000600703	SCN7A	Q01118	1682 aa		13.56	□□□□□ -0.24
ZNF350-208	ENST00000600703	UBR2	Q8IWV8	1755 aa		13.56	□□□□□ -0.24
ZNF350-208	ENST00000600703	KLRG2	A4D1S0	409 aa	Predicted RBP	13.56	□□□□□ -0.24
ZNF350-208	ENST00000600703	EPHX2	P34913	555 aa		13.56	□□□□□ -0.24
ZNF350-208	ENST00000600703	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.56	□□□□□ -0.24
ZNF350-208	ENST00000600703	PCNT	O95613	3336 aa		13.56	□□□□□ -0.24
ZNF350-208	ENST00000600703	FOXN1	O15353	648 aa		13.55	□□□□□ -0.24
ZNF350-208	ENST00000600703	KCNQ3	O43525	872 aa		13.55	□□□□□ -0.24
ZNF350-208	ENST00000600703	NEFM	P07197	916 aa		13.55	□□□□□ -0.24
ZNF350-208	ENST00000600703	IARS	P41252	1262 aa	Known RBP	13.55	□□□□□ -0.24
ZNF350-208	ENST00000600703	GRIPAP1	Q4V328	841 aa		13.55	□□□□□ -0.24
ZNF350-208	ENST00000600703	CC2D2B	Q6DHV5	1058 aa		13.55	□□□□□ -0.24
ZNF350-208	ENST00000600703	GPC2	Q8N158	579 aa		13.55	□□□□□ -0.24
ZNF350-208	ENST00000600703	PHACTR3	Q96KR7	559 aa		13.55	□□□□□ -0.24
ZNF350-208	ENST00000600703	NYX	Q9GZU5	481 aa		13.55	□□□□□ -0.24
ZNF350-208	ENST00000600703	RSPH6A	Q9H0K4	717 aa		13.55	□□□□□ -0.24
ZNF350-208	ENST00000600703	COL3A1	P02461	1466 aa	Predicted RBP	13.55	□□□□□ -0.24
ZNF350-208	ENST00000600703	HTATSF1	O43719	755 aa	Known RBP	13.54	□□□□□ -0.24
ZNF350-208	ENST00000600703	ITGBL1	O95965	494 aa	Predicted RBP	13.54	□□□□□ -0.24
ZNF350-208	ENST00000600703	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.54	□□□□□ -0.24
ZNF350-208	ENST00000600703	LMOD1	P29536	600 aa	Predicted RBP	13.54	□□□□□ -0.24
ZNF350-208	ENST00000600703	PIP4K2A	P48426	406 aa	Predicted RBP	13.54	□□□□□ -0.24
ZNF350-208	ENST00000600703	VEGFB	P49765	207 aa		13.54	□□□□□ -0.24
ZNF350-208	ENST00000600703	EIF6	P56537	245 aa	Known RBP	13.54	□□□□□ -0.24
ZNF350-208	ENST00000600703	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
ZNF350-208	ENST00000600703	MAP2K1	Q02750	393 aa	Predicted RBP	13.54	□□□□□ -0.24
ZNF350-208	ENST00000600703	DEFB115	Q30KQ5	88 aa		13.54	□□□□□ -0.24
ZNF350-208	ENST00000600703	FAM177B	A6PVY3	158 aa		13.53	□□□□□ -0.24
ZNF350-208	ENST00000600703	FZD9	O00144	591 aa		13.53	□□□□□ -0.24
ZNF350-208	ENST00000600703	CNTROB	Q8N137	903 aa		13.53	□□□□□ -0.24
ZNF350-208	ENST00000600703	SYNE4	Q8N205	404 aa		13.53	□□□□□ -0.24
ZNF350-208	ENST00000600703	PSMD1	Q99460	953 aa		13.53	□□□□□ -0.24
ZNF350-208	ENST00000600703	TMX4	Q9H1E5	349 aa	Predicted RBP	13.53	□□□□□ -0.24
ZNF350-208	ENST00000600703	ZNF541	Q9H0D2	1346 aa		13.53	□□□□□ -0.24
ZNF350-208	ENST00000600703	MCM10	Q7L590	875 aa		13.52	□□□□□ -0.25
ZNF350-208	ENST00000600703	PNISR	Q8TF01	805 aa	Known RBP	13.52	□□□□□ -0.25
ZNF350-208	ENST00000600703	RPGR	Q92834	1020 aa	Known RBP	13.52	□□□□□ -0.25
ZNF350-208	ENST00000600703	WBP1L	Q9NX94	342 aa		13.52	□□□□□ -0.25
ZNF350-208	ENST00000600703	ABT1	Q9ULW3	272 aa	Known RBP	13.52	□□□□□ -0.25
ZNF350-208	ENST00000600703	RNF123	Q5XPI4	1314 aa		13.52	□□□□□ -0.25
ZNF350-208	ENST00000600703	PRAMEF22	A3QJZ6	481 aa		13.51	□□□□□ -0.25
ZNF350-208	ENST00000600703	RASSF10	A6NK89	507 aa		13.51	□□□□□ -0.25
ZNF350-208	ENST00000600703	TAF7	Q15545	349 aa	Predicted RBP	13.51	□□□□□ -0.25
ZNF350-208	ENST00000600703	KIF6	Q6ZMV9	814 aa		13.51	□□□□□ -0.25
ZNF350-208	ENST00000600703	BEGAIN	Q9BUH8	593 aa		13.51	□□□□□ -0.25
ZNF350-208	ENST00000600703	COL11A2	P13942	1736 aa	Predicted RBP	13.5	□□□□□ -0.25
ZNF350-208	ENST00000600703	NBPF26	B4DH59	902 aa		13.5	□□□□□ -0.25
ZNF350-208	ENST00000600703	ERVV-1	B6SEH8	477 aa		13.5	□□□□□ -0.25
ZNF350-208	ENST00000600703	ECE1	P42892	770 aa		13.5	□□□□□ -0.25
ZNF350-208	ENST00000600703	LBX1	P52954	281 aa		13.5	□□□□□ -0.25
ZNF350-208	ENST00000600703	MAP1S	Q66K74	1059 aa	Predicted RBP	13.5	□□□□□ -0.25
ZNF350-208	ENST00000600703	NBPF10	Q6P3W6	841 aa	Known RBP	13.5	□□□□□ -0.25
ZNF350-208	ENST00000600703	NBPF15	Q8N660	670 aa		13.5	□□□□□ -0.25
ZNF350-208	ENST00000600703	GJA3	Q9Y6H8	435 aa		13.5	□□□□□ -0.25
ZNF350-208	ENST00000600703	FER1L6	Q2WGJ9	1857 aa		13.5	□□□□□ -0.25
ZNF350-208	ENST00000600703	ANKRD31	Q8N7Z5	1873 aa		13.5	□□□□□ -0.25
ZNF350-208	ENST00000600703	WDR33	Q9C0J8	1336 aa	Known RBP	13.49	□□□□□ -0.25
ZNF350-208	ENST00000600703	CRY2	Q49AN0	593 aa		13.49	□□□□□ -0.25
ZNF350-208	ENST00000600703	RBM17	Q96I25	401 aa	Known RBP	13.49	□□□□□ -0.25
ZNF350-208	ENST00000600703	HLF	Q16534	295 aa		13.48	□□□□□ -0.25
ZNF350-208	ENST00000600703	OLFM4	Q6UX06	510 aa		13.48	□□□□□ -0.25
ZNF350-208	ENST00000600703	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.48	□□□□□ -0.25
ZNF350-208	ENST00000600703	LARGE2	Q8N3Y3	721 aa		13.48	□□□□□ -0.25
ZNF350-208	ENST00000600703	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
ZNF350-208	ENST00000600703	DCTN1	Q14203	1278 aa		13.47	□□□□□ -0.25
ZNF350-208	ENST00000600703	USP50	Q70EL3	339 aa	Predicted RBP	13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms