RNA–Protein interactions for RNA: ENST00000600373.5

C19orf48-212, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-212ENST00000600373 L3MBTL3Q96JM7 780 aaPredicted RBP18.29■□□□□ 0.52
C19orf48-212ENST00000600373 SCN7AQ01118 1682 aa18.28■□□□□ 0.52
C19orf48-212ENST00000600373 DICER1Q9UPY3 1922 aaKnown RBP18.28■□□□□ 0.52
C19orf48-212ENST00000600373 FOXN1O15353 648 aa18.28■□□□□ 0.52
C19orf48-212ENST00000600373 DZIP3Q86Y13 1208 aaKnown RBP18.28■□□□□ 0.52
C19orf48-212ENST00000600373 TAF1DQ9H5J8 278 aaPredicted RBP18.28■□□□□ 0.52
C19orf48-212ENST00000600373 U2SURPO15042 1029 aaKnown RBP18.27■□□□□ 0.52
C19orf48-212ENST00000600373 CCDC93Q567U6 631 aa18.27■□□□□ 0.52
C19orf48-212ENST00000600373 CLEC4GQ6UXB4 293 aa18.27■□□□□ 0.52
C19orf48-212ENST00000600373 C7orf43Q8WVR3 580 aa18.27■□□□□ 0.52
C19orf48-212ENST00000600373 AIDAQ96BJ3 306 aa18.27■□□□□ 0.52
C19orf48-212ENST00000600373 VIRMAQ69YN4 1812 aaKnown RBP18.27■□□□□ 0.52
C19orf48-212ENST00000600373 COL11A2P13942 1736 aaPredicted RBP18.26■□□□□ 0.51
C19orf48-212ENST00000600373 TMEM88BA6NKF7 163 aa18.26■□□□□ 0.51
C19orf48-212ENST00000600373 PER1O15534 1290 aaPredicted RBP18.26■□□□□ 0.51
C19orf48-212ENST00000600373 CTCFP49711 727 aaPredicted RBP18.26■□□□□ 0.51
C19orf48-212ENST00000600373 CC2D1BQ5T0F9 858 aaKnown RBP18.26■□□□□ 0.51
C19orf48-212ENST00000600373 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
C19orf48-212ENST00000600373 NPR1P16066 1061 aa18.25■□□□□ 0.51
C19orf48-212ENST00000600373 FKBP4Q02790 459 aaKnown RBP eCLIP18.25■□□□□ 0.51
C19orf48-212ENST00000600373 NBPF5PQ86XG9 351 aaPredicted RBP18.25■□□□□ 0.51
C19orf48-212ENST00000600373 ZNF652Q9Y2D9 606 aa18.25■□□□□ 0.51
C19orf48-212ENST00000600373 ITGBL1O95965 494 aaPredicted RBP18.24■□□□□ 0.51
C19orf48-212ENST00000600373 VEGFBP49765 207 aa18.24■□□□□ 0.51
C19orf48-212ENST00000600373 HACL1Q9UJ83 578 aa18.24■□□□□ 0.51
C19orf48-212ENST00000600373 CEMIPQ8WUJ3 1361 aa18.24■□□□□ 0.51
C19orf48-212ENST00000600373 KIF7Q2M1P5 1343 aa18.23■□□□□ 0.51
C19orf48-212ENST00000600373 SLX4Q8IY92 1834 aa18.23■□□□□ 0.51
C19orf48-212ENST00000600373 KLRG2A4D1S0 409 aaPredicted RBP18.23■□□□□ 0.51
C19orf48-212ENST00000600373 KCNQ3O43525 872 aa18.23■□□□□ 0.51
C19orf48-212ENST00000600373 EAPPQ56P03 285 aaPredicted RBP18.23■□□□□ 0.51
C19orf48-212ENST00000600373 TPTE2Q6XPS3 522 aa18.23■□□□□ 0.51
C19orf48-212ENST00000600373 RTKN2Q8IZC4 609 aa18.23■□□□□ 0.51
C19orf48-212ENST00000600373 CLEC11AQ9Y240 323 aa18.23■□□□□ 0.51
C19orf48-212ENST00000600373 USP16Q9Y5T5 823 aa18.23■□□□□ 0.51
C19orf48-212ENST00000600373 PNMA8AQ86V59 439 aaPredicted RBP18.22■□□□□ 0.51
C19orf48-212ENST00000600373 ZNF277Q9NRM2 450 aaPredicted RBP18.22■□□□□ 0.51
C19orf48-212ENST00000600373 WBP1LQ9NX94 342 aa18.22■□□□□ 0.51
C19orf48-212ENST00000600373 RGL2O15211 777 aa18.21■□□□□ 0.51
C19orf48-212ENST00000600373 EPHX2P34913 555 aa18.21■□□□□ 0.51
C19orf48-212ENST00000600373 SCN4AP35499 1836 aa18.21■□□□□ 0.51
C19orf48-212ENST00000600373 ZNF541Q9H0D2 1346 aa18.21■□□□□ 0.51
C19orf48-212ENST00000600373 COL3A1P02461 1466 aaPredicted RBP18.2■□□□□ 0.5
C19orf48-212ENST00000600373 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
C19orf48-212ENST00000600373 ALDH1B1P30837 517 aa18.2■□□□□ 0.5
C19orf48-212ENST00000600373 PIP4K2AP48426 406 aaPredicted RBP18.2■□□□□ 0.5
C19orf48-212ENST00000600373 RASSF10A6NK89 507 aa18.19■□□□□ 0.5
C19orf48-212ENST00000600373 DEFB115Q30KQ5 88 aa18.19■□□□□ 0.5
C19orf48-212ENST00000600373 CNTROBQ8N137 903 aa18.19■□□□□ 0.5
C19orf48-212ENST00000600373 NIP7Q9Y221 180 aaKnown RBP eCLIP18.19■□□□□ 0.5
C19orf48-212ENST00000600373 ARFGEF2Q9Y6D5 1785 aa18.19■□□□□ 0.5
C19orf48-212ENST00000600373 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
C19orf48-212ENST00000600373 SIPA1L3O60292 1781 aaPredicted RBP18.18■□□□□ 0.5
C19orf48-212ENST00000600373 FZD9O00144 591 aa18.18■□□□□ 0.5
C19orf48-212ENST00000600373 IARSP41252 1262 aaKnown RBP18.18■□□□□ 0.5
C19orf48-212ENST00000600373 LBX1P52954 281 aa18.18■□□□□ 0.5
C19orf48-212ENST00000600373 PHACTR3Q96KR7 559 aa18.18■□□□□ 0.5
C19orf48-212ENST00000600373 PRAMEF22A3QJZ6 481 aa18.17■□□□□ 0.5
C19orf48-212ENST00000600373 PRKAR2BP31323 418 aa18.17■□□□□ 0.5
C19orf48-212ENST00000600373 OLFM4Q6UX06 510 aa18.17■□□□□ 0.5
C19orf48-212ENST00000600373 GPC2Q8N158 579 aa18.17■□□□□ 0.5
C19orf48-212ENST00000600373 SYNE4Q8N205 404 aa18.17■□□□□ 0.5
C19orf48-212ENST00000600373 RNF123Q5XPI4 1314 aa18.17■□□□□ 0.5
C19orf48-212ENST00000600373 BCORQ6W2J9 1755 aa18.17■□□□□ 0.5
C19orf48-212ENST00000600373 MAP2K1Q02750 393 aaPredicted RBP18.16■□□□□ 0.5
C19orf48-212ENST00000600373 MAP1SQ66K74 1059 aaPredicted RBP18.16■□□□□ 0.5
C19orf48-212ENST00000600373 JDP2Q8WYK2 163 aa18.16■□□□□ 0.5
C19orf48-212ENST00000600373 RTF1Q92541 710 aaKnown RBP18.16■□□□□ 0.5
C19orf48-212ENST00000600373 GTF2E1P29083 439 aaPredicted RBP18.15■□□□□ 0.5
C19orf48-212ENST00000600373 PSMD1Q99460 953 aa18.15■□□□□ 0.5
C19orf48-212ENST00000600373 RSPH6AQ9H0K4 717 aa18.15■□□□□ 0.5
C19orf48-212ENST00000600373 CACNA1SQ13698 1873 aa18.15■□□□□ 0.5
C19orf48-212ENST00000600373 WDR33Q9C0J8 1336 aaKnown RBP18.15■□□□□ 0.5
C19orf48-212ENST00000600373 FAM177BA6PVY3 158 aa18.14■□□□□ 0.49
C19orf48-212ENST00000600373 NBPF26B4DH59 902 aa18.14■□□□□ 0.49
C19orf48-212ENST00000600373 HSPA8P11142 646 aaKnown RBP18.14■□□□□ 0.49
C19orf48-212ENST00000600373 CNGB1Q14028 1251 aaPredicted RBP18.14■□□□□ 0.49
C19orf48-212ENST00000600373 CC2D2BQ6DHV5 1058 aa18.14■□□□□ 0.49
C19orf48-212ENST00000600373 NBPF10Q6P3W6 841 aaKnown RBP18.14■□□□□ 0.49
C19orf48-212ENST00000600373 NBPF15Q8N660 670 aa18.14■□□□□ 0.49
C19orf48-212ENST00000600373 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
C19orf48-212ENST00000600373 ABT1Q9ULW3 272 aaKnown RBP18.14■□□□□ 0.49
C19orf48-212ENST00000600373 EIF6P56537 245 aaKnown RBP18.13■□□□□ 0.49
C19orf48-212ENST00000600373 NUDCQ9Y266 331 aa18.13■□□□□ 0.49
C19orf48-212ENST00000600373 ADAMTSL1Q8N6G6 1762 aa18.12■□□□□ 0.49
C19orf48-212ENST00000600373 HLFQ16534 295 aa18.12■□□□□ 0.49
C19orf48-212ENST00000600373 MCM10Q7L590 875 aa18.12■□□□□ 0.49
C19orf48-212ENST00000600373 CCER1Q8TC90 406 aaPredicted RBP18.12■□□□□ 0.49
C19orf48-212ENST00000600373 ABHD8Q96I13 439 aa18.12■□□□□ 0.49
C19orf48-212ENST00000600373 NYXQ9GZU5 481 aa18.12■□□□□ 0.49
C19orf48-212ENST00000600373 DDX21Q9NR30 783 aaKnown RBP eCLIP18.12■□□□□ 0.49
C19orf48-212ENST00000600373 LMOD1P29536 600 aaPredicted RBP18.11■□□□□ 0.49
C19orf48-212ENST00000600373 CRY2Q49AN0 593 aa18.11■□□□□ 0.49
C19orf48-212ENST00000600373 GRIPAP1Q4V328 841 aa18.11■□□□□ 0.49
C19orf48-212ENST00000600373 GJA3Q9Y6H8 435 aa18.11■□□□□ 0.49
C19orf48-212ENST00000600373 HTATSF1O43719 755 aaKnown RBP18.1■□□□□ 0.49
C19orf48-212ENST00000600373 SNED1Q8TER0 1413 aa18.09■□□□□ 0.49
C19orf48-212ENST00000600373 ECE1P42892 770 aa18.09■□□□□ 0.49
C19orf48-212ENST00000600373 BEGAINQ9BUH8 593 aa18.09■□□□□ 0.49
C19orf48-212ENST00000600373 ERVV-1B6SEH8 477 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms