RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 DLEC1Q9Y238 1755 aa15.07■□□□□ 0
HIF3A-217ENST00000600236 NBPF26B4DH59 902 aa15.07■□□□□ 0
HIF3A-217ENST00000600236 C21orf2O43822 256 aa15.07■□□□□ 0
HIF3A-217ENST00000600236 FSTL1Q12841 308 aa15.07■□□□□ 0
HIF3A-217ENST00000600236 NBPF10Q6P3W6 841 aaKnown RBP15.07■□□□□ 0
HIF3A-217ENST00000600236 NBPF15Q8N660 670 aa15.07■□□□□ 0
HIF3A-217ENST00000600236 RRAGCQ9HB90 399 aa15.07■□□□□ 0
HIF3A-217ENST00000600236 NFKBIEO00221 500 aa15.06■□□□□ 0
HIF3A-217ENST00000600236 SRGNP10124 158 aa15.06■□□□□ 0
HIF3A-217ENST00000600236 GTF2E1P29083 439 aaPredicted RBP15.06■□□□□ 0
HIF3A-217ENST00000600236 EIF4A1P60842 406 aaKnown RBP15.06■□□□□ 0
HIF3A-217ENST00000600236 LMOD3Q0VAK6 560 aa15.06■□□□□ 0
HIF3A-217ENST00000600236 DPY19L2Q6NUT2 758 aa15.06■□□□□ 0
HIF3A-217ENST00000600236 KIF6Q6ZMV9 814 aa15.06■□□□□ 0
HIF3A-217ENST00000600236 TAOK3Q9H2K8 898 aa15.06■□□□□ 0
HIF3A-217ENST00000600236 ZNF219Q9P2Y4 722 aaPredicted RBP15.06■□□□□ 0
HIF3A-217ENST00000600236 BCORQ6W2J9 1755 aa15.06■□□□□ 0
HIF3A-217ENST00000600236 GLTPD2A6NH11 291 aa15.05■□□□□ -0
HIF3A-217ENST00000600236 MYBBP1AQ9BQG0 1328 aaKnown RBP15.04■□□□□ -0
HIF3A-217ENST00000600236 LTBP3Q9NS15 1303 aa15.04■□□□□ -0
HIF3A-217ENST00000600236 ERFEQ4G0M1 354 aa15.04■□□□□ -0
HIF3A-217ENST00000600236 PRPF40BQ6NWY9 871 aaKnown RBP15.04■□□□□ -0
HIF3A-217ENST00000600236 SMC1BQ8NDV3 1235 aa15.04■□□□□ -0
HIF3A-217ENST00000600236 TSPYL4Q9UJ04 414 aa15.04■□□□□ -0
HIF3A-217ENST00000600236 ERBB4Q15303 1308 aa15.03■□□□□ -0
HIF3A-217ENST00000600236 ERVV-1B6SEH8 477 aa15.03■□□□□ -0
HIF3A-217ENST00000600236 VEGFAP15692 232 aaPredicted RBP15.03■□□□□ -0
HIF3A-217ENST00000600236 NPR1P16066 1061 aa15.03■□□□□ -0
HIF3A-217ENST00000600236 RIPK4P57078 832 aa15.03■□□□□ -0
HIF3A-217ENST00000600236 NGEFQ8N5V2 710 aa15.03■□□□□ -0
HIF3A-217ENST00000600236 THUMPD2Q9BTF0 503 aaKnown RBP15.03■□□□□ -0
HIF3A-217ENST00000600236 NYXQ9GZU5 481 aa15.03■□□□□ -0
HIF3A-217ENST00000600236 RRP7AQ9Y3A4 280 aaKnown RBP15.03■□□□□ -0
HIF3A-217ENST00000600236 FAM177BA6PVY3 158 aa15.02■□□□□ -0
HIF3A-217ENST00000600236 PRELPP51888 382 aa15.02■□□□□ -0
HIF3A-217ENST00000600236 DDX10Q13206 875 aaKnown RBP15.02■□□□□ -0
HIF3A-217ENST00000600236 CCDC93Q567U6 631 aa15.02■□□□□ -0
HIF3A-217ENST00000600236 BABAM1Q9NWV8 329 aa15.02■□□□□ -0
HIF3A-217ENST00000600236 TNRC6CQ9HCJ0 1690 aaKnown RBP15.02□□□□□ -0.01
HIF3A-217ENST00000600236 LAMB4A4D0S4 1761 aa15.01□□□□□ -0.01
HIF3A-217ENST00000600236 MAP3K15Q6ZN16 1313 aa15.01□□□□□ -0.01
HIF3A-217ENST00000600236 KLRG2A4D1S0 409 aaPredicted RBP15.01□□□□□ -0.01
HIF3A-217ENST00000600236 MYL6BP14649 208 aa15.01□□□□□ -0.01
HIF3A-217ENST00000600236 ALDH1B1P30837 517 aa15.01□□□□□ -0.01
HIF3A-217ENST00000600236 HLFQ16534 295 aa15.01□□□□□ -0.01
HIF3A-217ENST00000600236 ANKRD31Q8N7Z5 1873 aa15.01□□□□□ -0.01
HIF3A-217ENST00000600236 WDR43Q15061 677 aaKnown RBP eCLIP15□□□□□ -0.01
HIF3A-217ENST00000600236 KDM3BQ7LBC6 1761 aa15□□□□□ -0.01
HIF3A-217ENST00000600236 COL11A2P13942 1736 aaPredicted RBP15□□□□□ -0.01
HIF3A-217ENST00000600236 TMPOP42166 694 aaKnown RBP14.99□□□□□ -0.01
HIF3A-217ENST00000600236 RTKN2Q8IZC4 609 aa14.99□□□□□ -0.01
HIF3A-217ENST00000600236 IBTKQ9P2D0 1353 aaPredicted RBP14.98□□□□□ -0.01
HIF3A-217ENST00000600236 SBF1O95248 1867 aa14.98□□□□□ -0.01
HIF3A-217ENST00000600236 TTLL7Q6ZT98 887 aa14.98□□□□□ -0.01
HIF3A-217ENST00000600236 ZBTB3Q9H5J0 574 aa14.98□□□□□ -0.01
HIF3A-217ENST00000600236 EIF2S2P20042 333 aaKnown RBP14.97□□□□□ -0.01
HIF3A-217ENST00000600236 FKBP4Q02790 459 aaKnown RBP eCLIP14.97□□□□□ -0.01
HIF3A-217ENST00000600236 RPGRQ92834 1020 aaKnown RBP14.97□□□□□ -0.01
HIF3A-217ENST00000600236 TIAM2Q8IVF5 1701 aa14.97□□□□□ -0.01
HIF3A-217ENST00000600236 GPTP24298 496 aa14.96□□□□□ -0.01
HIF3A-217ENST00000600236 NEUROD2Q15784 382 aa14.96□□□□□ -0.01
HIF3A-217ENST00000600236 PARP10Q53GL7 1025 aa14.96□□□□□ -0.01
HIF3A-217ENST00000600236 GIGYF2Q6Y7W6 1299 aaKnown RBP14.96□□□□□ -0.01
HIF3A-217ENST00000600236 PPP1R42Q7Z4L9 355 aa14.96□□□□□ -0.01
HIF3A-217ENST00000600236 NUTM1Q86Y26 1132 aa14.96□□□□□ -0.01
HIF3A-217ENST00000600236 C7orf43Q8WVR3 580 aa14.96□□□□□ -0.01
HIF3A-217ENST00000600236 RUNDC1Q96C34 613 aa14.96□□□□□ -0.01
HIF3A-217ENST00000600236 DLG5Q8TDM6 1919 aa14.96□□□□□ -0.02
HIF3A-217ENST00000600236 IQCA1LA6NCM1 817 aa14.95□□□□□ -0.02
HIF3A-217ENST00000600236 CRY2Q49AN0 593 aa14.95□□□□□ -0.02
HIF3A-217ENST00000600236 CC2D2BQ6DHV5 1058 aa14.95□□□□□ -0.02
HIF3A-217ENST00000600236 CCDC146Q8IYE0 955 aa14.95□□□□□ -0.02
HIF3A-217ENST00000600236 ABCC12Q96J65 1359 aa14.95□□□□□ -0.02
HIF3A-217ENST00000600236 RIC1Q4ADV7 1423 aa14.94□□□□□ -0.02
HIF3A-217ENST00000600236 GRIPAP1Q4V328 841 aa14.94□□□□□ -0.02
HIF3A-217ENST00000600236 HSP90AB3PQ58FF7 597 aa14.94□□□□□ -0.02
HIF3A-217ENST00000600236 SUSD4Q5VX71 490 aa14.94□□□□□ -0.02
HIF3A-217ENST00000600236 ZNF34Q8IZ26 560 aa14.94□□□□□ -0.02
HIF3A-217ENST00000600236 DNAJC5GQ8N7S2 189 aa14.94□□□□□ -0.02
HIF3A-217ENST00000600236 KLRG1Q96E93 195 aa14.94□□□□□ -0.02
HIF3A-217ENST00000600236 RBM17Q96I25 401 aaKnown RBP14.94□□□□□ -0.02
HIF3A-217ENST00000600236 TMX4Q9H1E5 349 aaPredicted RBP14.94□□□□□ -0.02
HIF3A-217ENST00000600236 UBN2Q6ZU65 1347 aa14.93□□□□□ -0.02
HIF3A-217ENST00000600236 ARFGEF2Q9Y6D5 1785 aa14.93□□□□□ -0.02
HIF3A-217ENST00000600236 FER1L6Q2WGJ9 1857 aa14.93□□□□□ -0.02
HIF3A-217ENST00000600236 WDR90Q96KV7 1748 aa14.93□□□□□ -0.02
HIF3A-217ENST00000600236 DDNO94850 711 aaPredicted RBP14.93□□□□□ -0.02
HIF3A-217ENST00000600236 ZNF277Q9NRM2 450 aaPredicted RBP14.93□□□□□ -0.02
HIF3A-217ENST00000600236 LAS1LQ9Y4W2 734 aaKnown RBP14.93□□□□□ -0.02
HIF3A-217ENST00000600236 SLX4Q8IY92 1834 aa14.93□□□□□ -0.02
HIF3A-217ENST00000600236 RNF123Q5XPI4 1314 aa14.92□□□□□ -0.02
HIF3A-217ENST00000600236 NTSR2O95665 410 aa14.92□□□□□ -0.02
HIF3A-217ENST00000600236 IARSP41252 1262 aaKnown RBP14.92□□□□□ -0.02
HIF3A-217ENST00000600236 PDIA6Q15084 440 aa14.92□□□□□ -0.02
HIF3A-217ENST00000600236 NLRP3Q96P20 1036 aa14.92□□□□□ -0.02
HIF3A-217ENST00000600236 UTP14AQ9BVJ6 771 aaKnown RBP14.92□□□□□ -0.02
HIF3A-217ENST00000600236 POTECB2RU33 542 aa14.91□□□□□ -0.02
HIF3A-217ENST00000600236 CHL1O00533 1208 aa14.91□□□□□ -0.02
HIF3A-217ENST00000600236 HOXA10P31260 410 aaPredicted RBP14.91□□□□□ -0.02
HIF3A-217ENST00000600236 HTRA3P83110 453 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms