RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 CYP4F22Q6NT55 531 aa18.85■□□□□ 0.61
HOMER3-212ENST00000600077 SLC52A2Q9HAB3 445 aa18.85■□□□□ 0.61
HOMER3-212ENST00000600077 SLX4Q8IY92 1834 aa18.84■□□□□ 0.61
HOMER3-212ENST00000600077 RNF123Q5XPI4 1314 aa18.84■□□□□ 0.61
HOMER3-212ENST00000600077 COL11A2P13942 1736 aaPredicted RBP18.84■□□□□ 0.61
HOMER3-212ENST00000600077 CANXP27824 592 aaKnown RBP18.84■□□□□ 0.61
HOMER3-212ENST00000600077 ST5P78524 1137 aa18.84■□□□□ 0.61
HOMER3-212ENST00000600077 FKBP4Q02790 459 aaKnown RBP eCLIP18.84■□□□□ 0.61
HOMER3-212ENST00000600077 GRM1Q13255 1194 aa18.84■□□□□ 0.61
HOMER3-212ENST00000600077 EIF5P55010 431 aaKnown RBP18.83■□□□□ 0.6
HOMER3-212ENST00000600077 DGKZQ13574 1117 aa18.83■□□□□ 0.6
HOMER3-212ENST00000600077 GPC2Q8N158 579 aa18.83■□□□□ 0.6
HOMER3-212ENST00000600077 CNBD1Q8NA66 436 aa18.83■□□□□ 0.6
HOMER3-212ENST00000600077 PCGF6Q9BYE7 350 aa18.83■□□□□ 0.6
HOMER3-212ENST00000600077 TSKSQ9UJT2 592 aa18.83■□□□□ 0.6
HOMER3-212ENST00000600077 STARD3NLO95772 234 aa18.82■□□□□ 0.6
HOMER3-212ENST00000600077 AKAP4Q5JQC9 854 aa18.82■□□□□ 0.6
HOMER3-212ENST00000600077 PRPF38BQ5VTL8 546 aaKnown RBP18.82■□□□□ 0.6
HOMER3-212ENST00000600077 CCDC24Q8N4L8 307 aa18.82■□□□□ 0.6
HOMER3-212ENST00000600077 SCN11AQ9UI33 1791 aa18.82■□□□□ 0.6
HOMER3-212ENST00000600077 ARFGEF2Q9Y6D5 1785 aa18.81■□□□□ 0.6
HOMER3-212ENST00000600077 CLSPNQ9HAW4 1339 aa18.81■□□□□ 0.6
HOMER3-212ENST00000600077 FZD9O00144 591 aa18.81■□□□□ 0.6
HOMER3-212ENST00000600077 RTKN2Q8IZC4 609 aa18.81■□□□□ 0.6
HOMER3-212ENST00000600077 C7orf43Q8WVR3 580 aa18.81■□□□□ 0.6
HOMER3-212ENST00000600077 SETDB2Q96T68 719 aa18.81■□□□□ 0.6
HOMER3-212ENST00000600077 TLL2Q9Y6L7 1015 aa18.81■□□□□ 0.6
HOMER3-212ENST00000600077 TNNT2P45379 298 aaPredicted RBP18.8■□□□□ 0.6
HOMER3-212ENST00000600077 SLC39A6Q13433 755 aa18.8■□□□□ 0.6
HOMER3-212ENST00000600077 ZNF277Q9NRM2 450 aaPredicted RBP18.8■□□□□ 0.6
HOMER3-212ENST00000600077 LMOD1P29536 600 aaPredicted RBP18.79■□□□□ 0.6
HOMER3-212ENST00000600077 BRPF1P55201 1214 aaPredicted RBP18.79■□□□□ 0.6
HOMER3-212ENST00000600077 LTBP1Q14766 1721 aa18.78■□□□□ 0.6
HOMER3-212ENST00000600077 TNRC18O15417 2968 aaPredicted RBP18.78■□□□□ 0.6
HOMER3-212ENST00000600077 NPM2Q86SE8 214 aaKnown RBP18.78■□□□□ 0.6
HOMER3-212ENST00000600077 AEBP1Q8IUX7 1158 aa18.78■□□□□ 0.6
HOMER3-212ENST00000600077 CACNA1SQ13698 1873 aa18.77■□□□□ 0.6
HOMER3-212ENST00000600077 AOC2O75106 756 aa18.77■□□□□ 0.6
HOMER3-212ENST00000600077 IARSP41252 1262 aaKnown RBP18.77■□□□□ 0.6
HOMER3-212ENST00000600077 CST9Q5W186 159 aa18.77■□□□□ 0.6
HOMER3-212ENST00000600077 JDP2Q8WYK2 163 aa18.77■□□□□ 0.6
HOMER3-212ENST00000600077 CASP8AP2Q9UKL3 1982 aa18.77■□□□□ 0.59
HOMER3-212ENST00000600077 NPR1P16066 1061 aa18.76■□□□□ 0.59
HOMER3-212ENST00000600077 SULT6B1Q6IMI4 303 aa18.76■□□□□ 0.59
HOMER3-212ENST00000600077 HHIPL1Q96JK4 782 aa18.76■□□□□ 0.59
HOMER3-212ENST00000600077 LGR6Q9HBX8 967 aa18.76■□□□□ 0.59
HOMER3-212ENST00000600077 TBC1D2BQ9UPU7 963 aa18.76■□□□□ 0.59
HOMER3-212ENST00000600077 RNMTO43148 476 aaKnown RBP18.75■□□□□ 0.59
HOMER3-212ENST00000600077 EIF6P56537 245 aaKnown RBP18.75■□□□□ 0.59
HOMER3-212ENST00000600077 USP50Q70EL3 339 aaPredicted RBP18.75■□□□□ 0.59
HOMER3-212ENST00000600077 TEX13AQ9BXU3 409 aaPredicted RBP18.75■□□□□ 0.59
HOMER3-212ENST00000600077 MRC1P22897 1456 aa18.75■□□□□ 0.59
HOMER3-212ENST00000600077 TRPM7Q96QT4 1865 aa18.75■□□□□ 0.59
HOMER3-212ENST00000600077 SCN7AQ01118 1682 aa18.74■□□□□ 0.59
HOMER3-212ENST00000600077 IL6STP40189 918 aaPredicted RBP18.74■□□□□ 0.59
HOMER3-212ENST00000600077 TIMELESSQ9UNS1 1208 aa18.74■□□□□ 0.59
HOMER3-212ENST00000600077 FMR1Q06787 632 aaKnown RBP eCLIP18.73■□□□□ 0.59
HOMER3-212ENST00000600077 SAPCD2Q86UD0 394 aa18.73■□□□□ 0.59
HOMER3-212ENST00000600077 TTC5Q8N0Z6 440 aa18.73■□□□□ 0.59
HOMER3-212ENST00000600077 SYNE4Q8N205 404 aa18.73■□□□□ 0.59
HOMER3-212ENST00000600077 ZNF330Q9Y3S2 320 aaPredicted RBP18.73■□□□□ 0.59
HOMER3-212ENST00000600077 GJA3Q9Y6H8 435 aa18.72■□□□□ 0.59
HOMER3-212ENST00000600077 ALDH1B1P30837 517 aa18.71■□□□□ 0.59
HOMER3-212ENST00000600077 SOX10P56693 466 aa18.71■□□□□ 0.59
HOMER3-212ENST00000600077 PSMD1Q99460 953 aa18.71■□□□□ 0.59
HOMER3-212ENST00000600077 KLRG2A4D1S0 409 aaPredicted RBP18.7■□□□□ 0.58
HOMER3-212ENST00000600077 TRAF5O00463 557 aa18.7■□□□□ 0.58
HOMER3-212ENST00000600077 NBPF5PQ86XG9 351 aaPredicted RBP18.7■□□□□ 0.58
HOMER3-212ENST00000600077 CCER1Q8TC90 406 aaPredicted RBP18.7■□□□□ 0.58
HOMER3-212ENST00000600077 CAMTA2O94983 1202 aa18.69■□□□□ 0.58
HOMER3-212ENST00000600077 EPS15P42566 896 aa18.69■□□□□ 0.58
HOMER3-212ENST00000600077 SCNN1DP51172 638 aa18.69■□□□□ 0.58
HOMER3-212ENST00000600077 NOGQ13253 232 aa18.69■□□□□ 0.58
HOMER3-212ENST00000600077 CIAPIN1Q6FI81 312 aa18.69■□□□□ 0.58
HOMER3-212ENST00000600077 GCC1Q96CN9 775 aa18.69■□□□□ 0.58
HOMER3-212ENST00000600077 CELF2O95319 508 aaKnown RBP18.68■□□□□ 0.58
HOMER3-212ENST00000600077 CC2D2BQ6DHV5 1058 aa18.68■□□□□ 0.58
HOMER3-212ENST00000600077 UBR2Q8IWV8 1755 aa18.68■□□□□ 0.58
HOMER3-212ENST00000600077 OLFM4Q6UX06 510 aa18.67■□□□□ 0.58
HOMER3-212ENST00000600077 CLEC4GQ6UXB4 293 aa18.67■□□□□ 0.58
HOMER3-212ENST00000600077 TPTE2Q6XPS3 522 aa18.67■□□□□ 0.58
HOMER3-212ENST00000600077 GRIPAP1Q4V328 841 aa18.66■□□□□ 0.58
HOMER3-212ENST00000600077 ZNF652Q9Y2D9 606 aa18.66■□□□□ 0.58
HOMER3-212ENST00000600077 HEG1Q9ULI3 1381 aa18.66■□□□□ 0.58
HOMER3-212ENST00000600077 DZIP3Q86Y13 1208 aaKnown RBP18.65■□□□□ 0.58
HOMER3-212ENST00000600077 ADARB2Q9NS39 739 aaKnown RBP18.65■□□□□ 0.58
HOMER3-212ENST00000600077 SAGE1Q9NXZ1 904 aa18.65■□□□□ 0.58
HOMER3-212ENST00000600077 IL13P35225 146 aa18.64■□□□□ 0.57
HOMER3-212ENST00000600077 NBPF15Q8N660 670 aa18.64■□□□□ 0.57
HOMER3-212ENST00000600077 ZNF496Q96IT1 587 aaPredicted RBP18.64■□□□□ 0.57
HOMER3-212ENST00000600077 BCORQ6W2J9 1755 aa18.63■□□□□ 0.57
HOMER3-212ENST00000600077 A1BGP04217 495 aa18.62■□□□□ 0.57
HOMER3-212ENST00000600077 ZNF790Q6PG37 636 aa18.62■□□□□ 0.57
HOMER3-212ENST00000600077 LARGE2Q8N3Y3 721 aa18.62■□□□□ 0.57
HOMER3-212ENST00000600077 RGL2O15211 777 aa18.61■□□□□ 0.57
HOMER3-212ENST00000600077 GPRC5DQ9NZD1 345 aa18.61■□□□□ 0.57
HOMER3-212ENST00000600077 SNED1Q8TER0 1413 aa18.6■□□□□ 0.57
HOMER3-212ENST00000600077 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
HOMER3-212ENST00000600077 MORC1Q86VD1 984 aa18.6■□□□□ 0.57
HOMER3-212ENST00000600077 NIM1KQ8IY84 436 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms