RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 RRBP1Q9P2E9 1410 aaKnown RBP11.5□□□□□ -0.57
LINC00343-206ENST00000598478 TRPM3Q9HCF6 1732 aaPredicted RBP11.49□□□□□ -0.57
LINC00343-206ENST00000598478 SSTR3P32745 418 aaPredicted RBP11.49□□□□□ -0.57
LINC00343-206ENST00000598478 PDE3BQ13370 1112 aa11.49□□□□□ -0.57
LINC00343-206ENST00000598478 LCE2AQ5TA79 106 aaPredicted RBP11.49□□□□□ -0.57
LINC00343-206ENST00000598478 HPS1Q92902 700 aa11.49□□□□□ -0.57
LINC00343-206ENST00000598478 NUDT12Q9BQG2 462 aa11.49□□□□□ -0.57
LINC00343-206ENST00000598478 ATP13A2Q9NQ11 1180 aa11.49□□□□□ -0.57
LINC00343-206ENST00000598478 STRN4Q9NRL3 753 aa11.49□□□□□ -0.57
LINC00343-206ENST00000598478 PCDHGC3Q9UN70 934 aa11.49□□□□□ -0.57
LINC00343-206ENST00000598478 C6orf229H3BNL8 230 aa11.48□□□□□ -0.57
LINC00343-206ENST00000598478 ITGAEP38570 1179 aa11.48□□□□□ -0.57
LINC00343-206ENST00000598478 CHRNA2Q15822 529 aa11.48□□□□□ -0.57
LINC00343-206ENST00000598478 PRDM11Q9NQV5 511 aa11.48□□□□□ -0.57
LINC00343-206ENST00000598478 ADGRF5Q8IZF2 1346 aa11.48□□□□□ -0.57
LINC00343-206ENST00000598478 ALS2Q96Q42 1657 aa11.48□□□□□ -0.57
LINC00343-206ENST00000598478 KNDC1Q76NI1 1749 aa11.48□□□□□ -0.57
LINC00343-206ENST00000598478 CRYBG1Q9Y4K1 1723 aa11.48□□□□□ -0.57
LINC00343-206ENST00000598478 RPGRIP1LQ68CZ1 1315 aa11.47□□□□□ -0.57
LINC00343-206ENST00000598478 PTCRAQ6ISU1 281 aaPredicted RBP11.47□□□□□ -0.57
LINC00343-206ENST00000598478 BARGINQ6ZT62 677 aa11.47□□□□□ -0.57
LINC00343-206ENST00000598478 SPIRE2Q8WWL2 714 aa11.47□□□□□ -0.57
LINC00343-206ENST00000598478 ABCC11Q96J66 1382 aa11.46□□□□□ -0.57
LINC00343-206ENST00000598478 TTLL12Q14166 644 aaPredicted RBP11.46□□□□□ -0.57
LINC00343-206ENST00000598478 MS4A1P11836 297 aa11.45□□□□□ -0.58
LINC00343-206ENST00000598478 KIAA0232Q92628 1395 aa11.44□□□□□ -0.58
LINC00343-206ENST00000598478 ALDH1A1P00352 501 aa11.44□□□□□ -0.58
LINC00343-206ENST00000598478 SAFB2Q14151 953 aaKnown RBP eCLIP11.44□□□□□ -0.58
LINC00343-206ENST00000598478 PTF1AQ7RTS3 328 aa11.44□□□□□ -0.58
LINC00343-206ENST00000598478 DLC1Q96QB1 1528 aa11.44□□□□□ -0.58
LINC00343-206ENST00000598478 SHANK3Q9BYB0 1731 aa11.43□□□□□ -0.58
LINC00343-206ENST00000598478 ZMYND10O75800 440 aa11.43□□□□□ -0.58
LINC00343-206ENST00000598478 WFS1O76024 890 aa11.43□□□□□ -0.58
LINC00343-206ENST00000598478 CCNYL3P0C7X3 344 aa11.43□□□□□ -0.58
LINC00343-206ENST00000598478 NDUFV2P19404 249 aa11.43□□□□□ -0.58
LINC00343-206ENST00000598478 RGPD3A6NKT7 1758 aaPredicted RBP11.43□□□□□ -0.58
LINC00343-206ENST00000598478 RGPD4Q7Z3J3 1758 aa11.43□□□□□ -0.58
LINC00343-206ENST00000598478 YTHDC2Q9H6S0 1430 aaKnown RBP11.43□□□□□ -0.58
LINC00343-206ENST00000598478 SBF2Q86WG5 1849 aa11.42□□□□□ -0.58
LINC00343-206ENST00000598478 MOXD2PA6NHM9 499 aa11.42□□□□□ -0.58
LINC00343-206ENST00000598478 SNRPBP14678 240 aaKnown RBP11.42□□□□□ -0.58
LINC00343-206ENST00000598478 ZC3H6P61129 1189 aaKnown RBP11.42□□□□□ -0.58
LINC00343-206ENST00000598478 GPR162Q16538 588 aa11.42□□□□□ -0.58
LINC00343-206ENST00000598478 AMHR2Q16671 573 aa11.42□□□□□ -0.58
LINC00343-206ENST00000598478 TRIM47Q96LD4 638 aa11.42□□□□□ -0.58
LINC00343-206ENST00000598478 SENP2Q9HC62 589 aa11.42□□□□□ -0.58
LINC00343-206ENST00000598478 PLSCR1O15162 318 aa11.41□□□□□ -0.58
LINC00343-206ENST00000598478 LARP1Q6PKG0 1096 aaKnown RBP11.41□□□□□ -0.58
LINC00343-206ENST00000598478 GIGYF2Q6Y7W6 1299 aaKnown RBP11.41□□□□□ -0.58
LINC00343-206ENST00000598478 EHBP1Q8NDI1 1231 aa11.41□□□□□ -0.58
LINC00343-206ENST00000598478 PEAK1Q9H792 1746 aa11.4□□□□□ -0.58
LINC00343-206ENST00000598478 ACIN1Q9UKV3 1341 aaKnown RBP11.4□□□□□ -0.58
LINC00343-206ENST00000598478 SIAH2O43255 324 aa11.4□□□□□ -0.58
LINC00343-206ENST00000598478 EVA1CP58658 441 aa11.4□□□□□ -0.58
LINC00343-206ENST00000598478 PTPRNQ16849 979 aa11.4□□□□□ -0.58
LINC00343-206ENST00000598478 ZC3H15Q8WU90 426 aaKnown RBP11.4□□□□□ -0.58
LINC00343-206ENST00000598478 SSH2Q76I76 1423 aa11.4□□□□□ -0.58
LINC00343-206ENST00000598478 GPRASP1Q5JY77 1395 aa11.4□□□□□ -0.59
LINC00343-206ENST00000598478 PHRF1Q9P1Y6 1649 aaKnown RBP11.39□□□□□ -0.59
LINC00343-206ENST00000598478 NFX1Q12986 1120 aaKnown RBP11.39□□□□□ -0.59
LINC00343-206ENST00000598478 RGL3Q3MIN7 710 aa11.39□□□□□ -0.59
LINC00343-206ENST00000598478 TCP11L2Q8N4U5 519 aa11.39□□□□□ -0.59
LINC00343-206ENST00000598478 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
LINC00343-206ENST00000598478 ARXQ96QS3 562 aa11.39□□□□□ -0.59
LINC00343-206ENST00000598478 PCNTO95613 3336 aa11.38□□□□□ -0.59
LINC00343-206ENST00000598478 PARP4Q9UKK3 1724 aaKnown RBP11.38□□□□□ -0.59
LINC00343-206ENST00000598478 SH3BP2P78314 561 aa11.38□□□□□ -0.59
LINC00343-206ENST00000598478 NUTM2GQ5VZR2 741 aa11.38□□□□□ -0.59
LINC00343-206ENST00000598478 PRAM1Q96QH2 718 aa11.38□□□□□ -0.59
LINC00343-206ENST00000598478 MTFR1LQ9H019 292 aa11.38□□□□□ -0.59
LINC00343-206ENST00000598478 ANKARQ7Z5J8 1434 aa11.37□□□□□ -0.59
LINC00343-206ENST00000598478 SIRT1Q96EB6 747 aa11.37□□□□□ -0.59
LINC00343-206ENST00000598478 BEGAINQ9BUH8 593 aa11.37□□□□□ -0.59
LINC00343-206ENST00000598478 UNC93B1Q9H1C4 597 aa11.37□□□□□ -0.59
LINC00343-206ENST00000598478 EVA1BQ9NVM1 165 aa11.37□□□□□ -0.59
LINC00343-206ENST00000598478 STK32BQ9NY57 414 aa11.37□□□□□ -0.59
LINC00343-206ENST00000598478 PRR36Q9H6K5 1346 aa11.36□□□□□ -0.59
LINC00343-206ENST00000598478 OVOS2A0A0G2JMS6 1433 aa11.36□□□□□ -0.59
LINC00343-206ENST00000598478 OVOS2A0A0J9YW53 1432 aa11.36□□□□□ -0.59
LINC00343-206ENST00000598478 OVOS2Q6IE36 1432 aa11.36□□□□□ -0.59
LINC00343-206ENST00000598478 MTMR2Q13614 643 aa11.36□□□□□ -0.59
LINC00343-206ENST00000598478 SLC15A2Q16348 729 aa11.36□□□□□ -0.59
LINC00343-206ENST00000598478 KIFC2Q96AC6 838 aa11.36□□□□□ -0.59
LINC00343-206ENST00000598478 HIRIP3Q9BW71 556 aaPredicted RBP11.36□□□□□ -0.59
LINC00343-206ENST00000598478 PIK3C2GO75747 1445 aa11.35□□□□□ -0.59
LINC00343-206ENST00000598478 SPDYE5A6NIY4 337 aa11.35□□□□□ -0.59
LINC00343-206ENST00000598478 HSPA6P17066 643 aa11.35□□□□□ -0.59
LINC00343-206ENST00000598478 LINC01559Q495D7 138 aa11.35□□□□□ -0.59
LINC00343-206ENST00000598478 NGDNQ8NEJ9 315 aaKnown RBP11.35□□□□□ -0.59
LINC00343-206ENST00000598478 WASF2Q9Y6W5 498 aa11.35□□□□□ -0.59
LINC00343-206ENST00000598478 MAP3K5Q99683 1374 aa11.34□□□□□ -0.59
LINC00343-206ENST00000598478 KCNH2Q12809 1159 aa11.34□□□□□ -0.59
LINC00343-206ENST00000598478 TXNRD1Q16881 649 aa11.34□□□□□ -0.59
LINC00343-206ENST00000598478 DESI1Q6ICB0 168 aa11.34□□□□□ -0.59
LINC00343-206ENST00000598478 LRRC37A3O60309 1634 aa11.34□□□□□ -0.59
LINC00343-206ENST00000598478 LMO7Q8WWI1 1683 aa11.33□□□□□ -0.6
LINC00343-206ENST00000598478 BAP1Q92560 729 aa11.33□□□□□ -0.6
LINC00343-206ENST00000598478 TBC1D2Q9BYX2 928 aa11.33□□□□□ -0.6
LINC00343-206ENST00000598478 POGKQ9P215 609 aa11.33□□□□□ -0.6
LINC00343-206ENST00000598478 THRAP3Q9Y2W1 955 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms