RNA–Protein interactions for RNA: ENST00000597507.1

C19orf54-207, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-207ENST00000597507 C7orf43Q8WVR3 580 aa22.19■■□□□ 1.14
C19orf54-207ENST00000597507 MASTLQ96GX5 879 aa22.19■■□□□ 1.14
C19orf54-207ENST00000597507 TMEM88BA6NKF7 163 aa22.18■■□□□ 1.14
C19orf54-207ENST00000597507 TEX13AQ9BXU3 409 aaPredicted RBP22.18■■□□□ 1.14
C19orf54-207ENST00000597507 WBP1LQ9NX94 342 aa22.18■■□□□ 1.14
C19orf54-207ENST00000597507 LBX1P52954 281 aa22.17■■□□□ 1.14
C19orf54-207ENST00000597507 SOGA3Q5TF21 947 aa22.17■■□□□ 1.14
C19orf54-207ENST00000597507 AIDAQ96BJ3 306 aa22.17■■□□□ 1.14
C19orf54-207ENST00000597507 NPHP1O15259 732 aa22.16■■□□□ 1.14
C19orf54-207ENST00000597507 ST5P78524 1137 aa22.16■■□□□ 1.14
C19orf54-207ENST00000597507 SIPA1L3O60292 1781 aaPredicted RBP22.15■■□□□ 1.14
C19orf54-207ENST00000597507 DIAPH1O60610 1272 aaKnown RBP22.15■■□□□ 1.14
C19orf54-207ENST00000597507 EAPPQ56P03 285 aaPredicted RBP22.15■■□□□ 1.14
C19orf54-207ENST00000597507 ZNF541Q9H0D2 1346 aa22.14■■□□□ 1.14
C19orf54-207ENST00000597507 TEFQ10587 303 aa22.14■■□□□ 1.13
C19orf54-207ENST00000597507 KCNQ3O43525 872 aa22.13■■□□□ 1.13
C19orf54-207ENST00000597507 OLFM4Q6UX06 510 aa22.13■■□□□ 1.13
C19orf54-207ENST00000597507 ZNF277Q9NRM2 450 aaPredicted RBP22.13■■□□□ 1.13
C19orf54-207ENST00000597507 CLEC11AQ9Y240 323 aa22.13■■□□□ 1.13
C19orf54-207ENST00000597507 BCORQ6W2J9 1755 aa22.12■■□□□ 1.13
C19orf54-207ENST00000597507 ADAMTSL1Q8N6G6 1762 aa22.12■■□□□ 1.13
C19orf54-207ENST00000597507 CCDC93Q567U6 631 aa22.12■■□□□ 1.13
C19orf54-207ENST00000597507 DZIP3Q86Y13 1208 aaKnown RBP22.12■■□□□ 1.13
C19orf54-207ENST00000597507 FMNL2Q96PY5 1086 aa22.12■■□□□ 1.13
C19orf54-207ENST00000597507 HACL1Q9UJ83 578 aa22.12■■□□□ 1.13
C19orf54-207ENST00000597507 GNAT3A8MTJ3 354 aa22.11■■□□□ 1.13
C19orf54-207ENST00000597507 EPHX2P34913 555 aa22.11■■□□□ 1.13
C19orf54-207ENST00000597507 PIP4K2AP48426 406 aaPredicted RBP22.11■■□□□ 1.13
C19orf54-207ENST00000597507 NPM2Q86SE8 214 aaKnown RBP22.11■■□□□ 1.13
C19orf54-207ENST00000597507 RASSF10A6NK89 507 aa22.1■■□□□ 1.13
C19orf54-207ENST00000597507 SLC34A2O95436 690 aa22.1■■□□□ 1.13
C19orf54-207ENST00000597507 HSPA8P11142 646 aaKnown RBP22.1■■□□□ 1.13
C19orf54-207ENST00000597507 FKBP4Q02790 459 aaKnown RBP eCLIP22.1■■□□□ 1.13
C19orf54-207ENST00000597507 DEFB115Q30KQ5 88 aa22.1■■□□□ 1.13
C19orf54-207ENST00000597507 MAP1SQ66K74 1059 aaPredicted RBP22.1■■□□□ 1.13
C19orf54-207ENST00000597507 NBPF5PQ86XG9 351 aaPredicted RBP22.1■■□□□ 1.13
C19orf54-207ENST00000597507 CNTROBQ8N137 903 aa22.1■■□□□ 1.13
C19orf54-207ENST00000597507 USP16Q9Y5T5 823 aa22.1■■□□□ 1.13
C19orf54-207ENST00000597507 KLRG2A4D1S0 409 aaPredicted RBP22.09■■□□□ 1.13
C19orf54-207ENST00000597507 NPR1P16066 1061 aa22.09■■□□□ 1.13
C19orf54-207ENST00000597507 TRIM26Q12899 539 aaPredicted RBP22.09■■□□□ 1.13
C19orf54-207ENST00000597507 ABHD8Q96I13 439 aa22.09■■□□□ 1.13
C19orf54-207ENST00000597507 RNF123Q5XPI4 1314 aa22.07■■□□□ 1.12
C19orf54-207ENST00000597507 WDR33Q9C0J8 1336 aaKnown RBP22.07■■□□□ 1.12
C19orf54-207ENST00000597507 CLEC4GQ6UXB4 293 aa22.07■■□□□ 1.12
C19orf54-207ENST00000597507 GAS2L2Q8NHY3 880 aa22.07■■□□□ 1.12
C19orf54-207ENST00000597507 PRAMEF22A3QJZ6 481 aa22.06■■□□□ 1.12
C19orf54-207ENST00000597507 FZD9O00144 591 aa22.06■■□□□ 1.12
C19orf54-207ENST00000597507 PNMA8AQ86V59 439 aaPredicted RBP22.06■■□□□ 1.12
C19orf54-207ENST00000597507 CEMIPQ8WUJ3 1361 aa22.05■■□□□ 1.12
C19orf54-207ENST00000597507 BTBD11A6QL63 1104 aa22.05■■□□□ 1.12
C19orf54-207ENST00000597507 PER1O15534 1290 aaPredicted RBP22.05■■□□□ 1.12
C19orf54-207ENST00000597507 FAM161AQ3B820 660 aa22.05■■□□□ 1.12
C19orf54-207ENST00000597507 CC2D1BQ5T0F9 858 aaKnown RBP22.05■■□□□ 1.12
C19orf54-207ENST00000597507 RTKN2Q8IZC4 609 aa22.05■■□□□ 1.12
C19orf54-207ENST00000597507 SYNE4Q8N205 404 aa22.05■■□□□ 1.12
C19orf54-207ENST00000597507 U2SURPO15042 1029 aaKnown RBP22.04■■□□□ 1.12
C19orf54-207ENST00000597507 IARSP41252 1262 aaKnown RBP22.04■■□□□ 1.12
C19orf54-207ENST00000597507 MAP2K1Q02750 393 aaPredicted RBP22.04■■□□□ 1.12
C19orf54-207ENST00000597507 CLSPNQ9HAW4 1339 aa22.04■■□□□ 1.12
C19orf54-207ENST00000597507 COL3A1P02461 1466 aaPredicted RBP22.03■■□□□ 1.12
C19orf54-207ENST00000597507 TPTE2Q6XPS3 522 aa22.03■■□□□ 1.12
C19orf54-207ENST00000597507 ABT1Q9ULW3 272 aaKnown RBP22.03■■□□□ 1.12
C19orf54-207ENST00000597507 FAM177BA6PVY3 158 aa22.02■■□□□ 1.12
C19orf54-207ENST00000597507 FMR1Q06787 632 aaKnown RBP eCLIP22.02■■□□□ 1.12
C19orf54-207ENST00000597507 GPC2Q8N158 579 aa22.02■■□□□ 1.12
C19orf54-207ENST00000597507 PHACTR3Q96KR7 559 aa22.02■■□□□ 1.12
C19orf54-207ENST00000597507 DDX21Q9NR30 783 aaKnown RBP eCLIP22.02■■□□□ 1.12
C19orf54-207ENST00000597507 NIP7Q9Y221 180 aaKnown RBP eCLIP22.02■■□□□ 1.12
C19orf54-207ENST00000597507 PCGF6Q9BYE7 350 aa22.01■■□□□ 1.11
C19orf54-207ENST00000597507 ZNF652Q9Y2D9 606 aa22.01■■□□□ 1.11
C19orf54-207ENST00000597507 NBPF26B4DH59 902 aa22■■□□□ 1.11
C19orf54-207ENST00000597507 ALDH1B1P30837 517 aa22■■□□□ 1.11
C19orf54-207ENST00000597507 NBPF10Q6P3W6 841 aaKnown RBP22■■□□□ 1.11
C19orf54-207ENST00000597507 NBPF15Q8N660 670 aa22■■□□□ 1.11
C19orf54-207ENST00000597507 KIF7Q2M1P5 1343 aa22■■□□□ 1.11
C19orf54-207ENST00000597507 SNED1Q8TER0 1413 aa21.99■■□□□ 1.11
C19orf54-207ENST00000597507 LTBP1Q14766 1721 aa21.99■■□□□ 1.11
C19orf54-207ENST00000597507 SNRPA1P09661 255 aaKnown RBP21.98■■□□□ 1.11
C19orf54-207ENST00000597507 HLFQ16534 295 aa21.98■■□□□ 1.11
C19orf54-207ENST00000597507 GJA3Q9Y6H8 435 aa21.98■■□□□ 1.11
C19orf54-207ENST00000597507 COL4A5P29400 1685 aa21.98■■□□□ 1.11
C19orf54-207ENST00000597507 JDP2Q8WYK2 163 aa21.97■■□□□ 1.11
C19orf54-207ENST00000597507 PSMD1Q99460 953 aa21.97■■□□□ 1.11
C19orf54-207ENST00000597507 CCDC85CA6NKD9 419 aa21.96■■□□□ 1.11
C19orf54-207ENST00000597507 EPS15P42566 896 aa21.96■■□□□ 1.11
C19orf54-207ENST00000597507 CNGB1Q14028 1251 aaPredicted RBP21.96■■□□□ 1.11
C19orf54-207ENST00000597507 CAPNS2Q96L46 248 aa21.96■■□□□ 1.11
C19orf54-207ENST00000597507 TRPM7Q96QT4 1865 aa21.95■■□□□ 1.1
C19orf54-207ENST00000597507 RGL2O15211 777 aa21.95■■□□□ 1.1
C19orf54-207ENST00000597507 PRKAR2BP31323 418 aa21.95■■□□□ 1.1
C19orf54-207ENST00000597507 SCNN1DP51172 638 aa21.95■■□□□ 1.1
C19orf54-207ENST00000597507 CST9Q5W186 159 aa21.95■■□□□ 1.1
C19orf54-207ENST00000597507 CYP4F22Q6NT55 531 aa21.95■■□□□ 1.1
C19orf54-207ENST00000597507 GPR101Q96P66 508 aaPredicted RBP21.95■■□□□ 1.1
C19orf54-207ENST00000597507 THSD7BQ9C0I4 1608 aa21.95■■□□□ 1.1
C19orf54-207ENST00000597507 GTF2E1P29083 439 aaPredicted RBP21.94■■□□□ 1.1
C19orf54-207ENST00000597507 RGS19P49795 217 aa21.94■■□□□ 1.1
C19orf54-207ENST00000597507 EIF6P56537 245 aaKnown RBP21.94■■□□□ 1.1
C19orf54-207ENST00000597507 GRM1Q13255 1194 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms