RNA–Protein interactions for RNA: ENST00000596288.5

MCM3-205, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-205ENST00000596288 HOXB7P09629 217 aa10.8□□□□□ -0.68
MCM3-205ENST00000596288 NUTM1Q86Y26 1132 aa10.8□□□□□ -0.68
MCM3-205ENST00000596288 CHPF2Q9P2E5 772 aa10.8□□□□□ -0.68
MCM3-205ENST00000596288 SLIT3O75094 1523 aa10.8□□□□□ -0.68
MCM3-205ENST00000596288 RHPN1Q8TCX5 695 aa10.79□□□□□ -0.68
MCM3-205ENST00000596288 ZNF142P52746 1687 aaPredicted RBP10.79□□□□□ -0.68
MCM3-205ENST00000596288 RAB11FIP3O75154 756 aa10.79□□□□□ -0.68
MCM3-205ENST00000596288 PHF8Q9UPP1 1060 aa10.79□□□□□ -0.68
MCM3-205ENST00000596288 SGSM2O43147 1006 aa10.79□□□□□ -0.68
MCM3-205ENST00000596288 RAD50Q92878 1312 aa10.79□□□□□ -0.68
MCM3-205ENST00000596288 RPAP1Q9BWH6 1393 aaPredicted RBP10.78□□□□□ -0.68
MCM3-205ENST00000596288 MTX1Q13505 466 aa10.78□□□□□ -0.68
MCM3-205ENST00000596288 TTC14Q96N46 770 aa10.78□□□□□ -0.68
MCM3-205ENST00000596288 LSG1Q9H089 658 aaKnown RBP10.78□□□□□ -0.68
MCM3-205ENST00000596288 LMTK3Q96Q04 1460 aa10.78□□□□□ -0.68
MCM3-205ENST00000596288 OVOS2A0A0G2JMS6 1433 aa10.78□□□□□ -0.68
MCM3-205ENST00000596288 ADGRL3Q9HAR2 1447 aa10.78□□□□□ -0.68
MCM3-205ENST00000596288 PI4KAP2A4QPH2 592 aa10.78□□□□□ -0.68
MCM3-205ENST00000596288 FOSBP53539 338 aa10.78□□□□□ -0.68
MCM3-205ENST00000596288 PI4KAP1Q8N8J0 262 aa10.78□□□□□ -0.68
MCM3-205ENST00000596288 TRPM3Q9HCF6 1732 aaPredicted RBP10.77□□□□□ -0.68
MCM3-205ENST00000596288 DNAAF4Q8WXU2 420 aa10.77□□□□□ -0.68
MCM3-205ENST00000596288 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.77□□□□□ -0.68
MCM3-205ENST00000596288 SETD1BQ9UPS6 1966 aaKnown RBP10.77□□□□□ -0.69
MCM3-205ENST00000596288 SRGAP3O43295 1099 aa10.77□□□□□ -0.69
MCM3-205ENST00000596288 SURF6O75683 361 aaKnown RBP10.77□□□□□ -0.69
MCM3-205ENST00000596288 LMOD2Q6P5Q4 547 aa10.77□□□□□ -0.69
MCM3-205ENST00000596288 FBXW7Q969H0 707 aa10.77□□□□□ -0.69
MCM3-205ENST00000596288 TCEANC2Q96MN5 208 aa10.77□□□□□ -0.69
MCM3-205ENST00000596288 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.77□□□□□ -0.69
MCM3-205ENST00000596288 LRRC59Q96AG4 307 aaKnown RBP10.77□□□□□ -0.69
MCM3-205ENST00000596288 MCCP23508 829 aa10.76□□□□□ -0.69
MCM3-205ENST00000596288 LRSAM1Q6UWE0 723 aa10.76□□□□□ -0.69
MCM3-205ENST00000596288 RASEFQ8IZ41 740 aa10.76□□□□□ -0.69
MCM3-205ENST00000596288 KIF1BPQ96EK5 621 aa10.76□□□□□ -0.69
MCM3-205ENST00000596288 CHMP4AQ9BY43 222 aa10.76□□□□□ -0.69
MCM3-205ENST00000596288 SNX14Q9Y5W7 946 aa10.76□□□□□ -0.69
MCM3-205ENST00000596288 OFD1O75665 1012 aa10.76□□□□□ -0.69
MCM3-205ENST00000596288 AKAP4Q5JQC9 854 aa10.76□□□□□ -0.69
MCM3-205ENST00000596288 TTC12Q9H892 705 aaPredicted RBP10.76□□□□□ -0.69
MCM3-205ENST00000596288 GADD45BO75293 160 aaPredicted RBP10.75□□□□□ -0.69
MCM3-205ENST00000596288 PROSER3Q2NL68 480 aa10.75□□□□□ -0.69
MCM3-205ENST00000596288 SPC24Q8NBT2 197 aa10.75□□□□□ -0.69
MCM3-205ENST00000596288 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.75□□□□□ -0.69
MCM3-205ENST00000596288 TCHHQ07283 1943 aa10.75□□□□□ -0.69
MCM3-205ENST00000596288 CGNQ9P2M7 1197 aaKnown RBP10.75□□□□□ -0.69
MCM3-205ENST00000596288 C5P01031 1676 aa10.75□□□□□ -0.69
MCM3-205ENST00000596288 NPHP1O15259 732 aa10.75□□□□□ -0.69
MCM3-205ENST00000596288 FIBPO43427 364 aa10.75□□□□□ -0.69
MCM3-205ENST00000596288 KAZALD1Q96I82 304 aa10.75□□□□□ -0.69
MCM3-205ENST00000596288 PRAMEF22A3QJZ6 481 aa10.74□□□□□ -0.69
MCM3-205ENST00000596288 PDE4CQ08493 712 aa10.74□□□□□ -0.69
MCM3-205ENST00000596288 PPP4R3BQ5MIZ7 849 aa10.74□□□□□ -0.69
MCM3-205ENST00000596288 TTC41PQ6P2S7 1318 aa10.74□□□□□ -0.69
MCM3-205ENST00000596288 RNMTO43148 476 aaKnown RBP10.74□□□□□ -0.69
MCM3-205ENST00000596288 GIGYF1O75420 1035 aaPredicted RBP10.74□□□□□ -0.69
MCM3-205ENST00000596288 FAM173BQ6P4H8 233 aa10.74□□□□□ -0.69
MCM3-205ENST00000596288 MPRIPQ6WCQ1 1025 aa10.74□□□□□ -0.69
MCM3-205ENST00000596288 RUFY3Q7L099 469 aa10.74□□□□□ -0.69
MCM3-205ENST00000596288 FERMT3Q86UX7 667 aa10.74□□□□□ -0.69
MCM3-205ENST00000596288 ARHGEF25Q86VW2 580 aa10.74□□□□□ -0.69
MCM3-205ENST00000596288 RGPD5Q99666 1765 aa10.74□□□□□ -0.69
MCM3-205ENST00000596288 BTBD11A6QL63 1104 aa10.73□□□□□ -0.69
MCM3-205ENST00000596288 HS1BP3Q53T59 392 aa10.73□□□□□ -0.69
MCM3-205ENST00000596288 TMEM87AQ8NBN3 555 aa10.73□□□□□ -0.69
MCM3-205ENST00000596288 KCNB2Q92953 911 aa10.73□□□□□ -0.69
MCM3-205ENST00000596288 SPG7Q9UQ90 795 aa10.73□□□□□ -0.69
MCM3-205ENST00000596288 UTYO14607 1347 aa10.73□□□□□ -0.69
MCM3-205ENST00000596288 MBD3O95983 291 aa10.73□□□□□ -0.69
MCM3-205ENST00000596288 FGD1P98174 961 aa10.73□□□□□ -0.69
MCM3-205ENST00000596288 KCNH5Q8NCM2 988 aa10.73□□□□□ -0.69
MCM3-205ENST00000596288 MRC1P22897 1456 aa10.73□□□□□ -0.69
MCM3-205ENST00000596288 AK2P54819 239 aa10.73□□□□□ -0.69
MCM3-205ENST00000596288 ZNF530Q6P9A1 599 aaPredicted RBP10.73□□□□□ -0.69
MCM3-205ENST00000596288 DBF4Q9UBU7 674 aaPredicted RBP10.73□□□□□ -0.69
MCM3-205ENST00000596288 USP25Q9UHP3 1055 aa10.73□□□□□ -0.69
MCM3-205ENST00000596288 LARGE1O95461 756 aa10.72□□□□□ -0.69
MCM3-205ENST00000596288 ST3GAL1Q11201 340 aa10.72□□□□□ -0.69
MCM3-205ENST00000596288 OS9Q13438 667 aaPredicted RBP10.72□□□□□ -0.69
MCM3-205ENST00000596288 MST1RQ04912 1400 aa10.72□□□□□ -0.69
MCM3-205ENST00000596288 PDIA6Q15084 440 aa10.72□□□□□ -0.69
MCM3-205ENST00000596288 CNTROBQ8N137 903 aa10.72□□□□□ -0.69
MCM3-205ENST00000596288 NOL7Q9UMY1 257 aaKnown RBP10.72□□□□□ -0.69
MCM3-205ENST00000596288 AXIN2Q9Y2T1 843 aa10.72□□□□□ -0.69
MCM3-205ENST00000596288 MAP3K2Q9Y2U5 619 aa10.72□□□□□ -0.69
MCM3-205ENST00000596288 GCP02774 474 aa10.71□□□□□ -0.69
MCM3-205ENST00000596288 PTH1RQ03431 593 aa10.71□□□□□ -0.69
MCM3-205ENST00000596288 COL9A3Q14050 684 aaPredicted RBP10.71□□□□□ -0.69
MCM3-205ENST00000596288 CWC27Q6UX04 472 aaKnown RBP10.71□□□□□ -0.69
MCM3-205ENST00000596288 ALDH1L1O75891 902 aa10.71□□□□□ -0.69
MCM3-205ENST00000596288 CAMK4Q16566 473 aa10.71□□□□□ -0.69
MCM3-205ENST00000596288 CWF19L2Q2TBE0 894 aaKnown RBP10.71□□□□□ -0.69
MCM3-205ENST00000596288 USP48Q86UV5 1035 aa10.71□□□□□ -0.69
MCM3-205ENST00000596288 HYPKQ9NX55 129 aa10.71□□□□□ -0.69
MCM3-205ENST00000596288 WDR33Q9C0J8 1336 aaKnown RBP10.71□□□□□ -0.7
MCM3-205ENST00000596288 SCN11AQ9UI33 1791 aa10.71□□□□□ -0.7
MCM3-205ENST00000596288 GLRX3O76003 335 aaKnown RBP10.71□□□□□ -0.7
MCM3-205ENST00000596288 TEFQ10587 303 aa10.71□□□□□ -0.7
MCM3-205ENST00000596288 ADCK5Q3MIX3 580 aa10.71□□□□□ -0.7
MCM3-205ENST00000596288 AMOTQ4VCS5 1084 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms