RNA–Protein interactions for RNA: ENST00000595797.5

PAF1-205, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene PAF1, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-205ENST00000595797 CLEC11AQ9Y240 323 aa17.17■□□□□ 0.34
PAF1-205ENST00000595797 BCORQ6W2J9 1755 aa17.17■□□□□ 0.34
PAF1-205ENST00000595797 CCDC93Q567U6 631 aa17.16■□□□□ 0.34
PAF1-205ENST00000595797 EAPPQ56P03 285 aaPredicted RBP17.16■□□□□ 0.34
PAF1-205ENST00000595797 ZNF652Q9Y2D9 606 aa17.16■□□□□ 0.34
PAF1-205ENST00000595797 CTCFP49711 727 aaPredicted RBP17.15■□□□□ 0.34
PAF1-205ENST00000595797 NBPF5PQ86XG9 351 aaPredicted RBP17.15■□□□□ 0.34
PAF1-205ENST00000595797 DZIP3Q86Y13 1208 aaKnown RBP17.15■□□□□ 0.34
PAF1-205ENST00000595797 SIPA1L3O60292 1781 aaPredicted RBP17.15■□□□□ 0.34
PAF1-205ENST00000595797 CNTNAP1P78357 1384 aa17.15■□□□□ 0.34
PAF1-205ENST00000595797 SRGNP10124 158 aa17.14■□□□□ 0.33
PAF1-205ENST00000595797 CC2D1BQ5T0F9 858 aaKnown RBP17.14■□□□□ 0.33
PAF1-205ENST00000595797 TMEM88BA6NKF7 163 aa17.13■□□□□ 0.33
PAF1-205ENST00000595797 FOXN1O15353 648 aa17.13■□□□□ 0.33
PAF1-205ENST00000595797 POTEIP0CG38 1075 aa17.13■□□□□ 0.33
PAF1-205ENST00000595797 POTEJP0CG39 1038 aa17.13■□□□□ 0.33
PAF1-205ENST00000595797 CNGB1Q14028 1251 aaPredicted RBP17.13■□□□□ 0.33
PAF1-205ENST00000595797 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
PAF1-205ENST00000595797 PRDM10Q9NQV6 1147 aa17.13■□□□□ 0.33
PAF1-205ENST00000595797 A1BGP04217 495 aa17.12■□□□□ 0.33
PAF1-205ENST00000595797 TAF1DQ9H5J8 278 aaPredicted RBP17.12■□□□□ 0.33
PAF1-205ENST00000595797 HACL1Q9UJ83 578 aa17.12■□□□□ 0.33
PAF1-205ENST00000595797 BTBD11A6QL63 1104 aa17.11■□□□□ 0.33
PAF1-205ENST00000595797 NPR1P16066 1061 aa17.11■□□□□ 0.33
PAF1-205ENST00000595797 GTF2E1P29083 439 aaPredicted RBP17.11■□□□□ 0.33
PAF1-205ENST00000595797 CAMTA2O94983 1202 aa17.1■□□□□ 0.33
PAF1-205ENST00000595797 FKBP4Q02790 459 aaKnown RBP eCLIP17.1■□□□□ 0.33
PAF1-205ENST00000595797 L3MBTL3Q96JM7 780 aaPredicted RBP17.1■□□□□ 0.33
PAF1-205ENST00000595797 TPTE2Q6XPS3 522 aa17.09■□□□□ 0.33
PAF1-205ENST00000595797 PNMA8AQ86V59 439 aaPredicted RBP17.09■□□□□ 0.33
PAF1-205ENST00000595797 RTKN2Q8IZC4 609 aa17.09■□□□□ 0.33
PAF1-205ENST00000595797 RTF1Q92541 710 aaKnown RBP17.09■□□□□ 0.33
PAF1-205ENST00000595797 ABT1Q9ULW3 272 aaKnown RBP17.09■□□□□ 0.33
PAF1-205ENST00000595797 PASKQ96RG2 1323 aa17.08■□□□□ 0.32
PAF1-205ENST00000595797 EPHX2P34913 555 aa17.08■□□□□ 0.32
PAF1-205ENST00000595797 VEGFBP49765 207 aa17.08■□□□□ 0.32
PAF1-205ENST00000595797 CLEC4GQ6UXB4 293 aa17.08■□□□□ 0.32
PAF1-205ENST00000595797 PAXIP1Q6ZW49 1069 aaPredicted RBP17.08■□□□□ 0.32
PAF1-205ENST00000595797 IL17REQ8NFR9 667 aa17.08■□□□□ 0.32
PAF1-205ENST00000595797 CFAP53Q96M91 514 aa17.08■□□□□ 0.32
PAF1-205ENST00000595797 BEGAINQ9BUH8 593 aa17.08■□□□□ 0.32
PAF1-205ENST00000595797 ZNF277Q9NRM2 450 aaPredicted RBP17.08■□□□□ 0.32
PAF1-205ENST00000595797 FAM177BA6PVY3 158 aa17.07■□□□□ 0.32
PAF1-205ENST00000595797 LMOD1P29536 600 aaPredicted RBP17.07■□□□□ 0.32
PAF1-205ENST00000595797 JDP2Q8WYK2 163 aa17.07■□□□□ 0.32
PAF1-205ENST00000595797 NIP7Q9Y221 180 aaKnown RBP eCLIP17.07■□□□□ 0.32
PAF1-205ENST00000595797 ZNF541Q9H0D2 1346 aa17.06■□□□□ 0.32
PAF1-205ENST00000595797 ALDH1B1P30837 517 aa17.06■□□□□ 0.32
PAF1-205ENST00000595797 PIP4K2AP48426 406 aaPredicted RBP17.06■□□□□ 0.32
PAF1-205ENST00000595797 LBX1P52954 281 aa17.06■□□□□ 0.32
PAF1-205ENST00000595797 MAP2K1Q02750 393 aaPredicted RBP17.06■□□□□ 0.32
PAF1-205ENST00000595797 DEFB115Q30KQ5 88 aa17.06■□□□□ 0.32
PAF1-205ENST00000595797 CCER1Q8TC90 406 aaPredicted RBP17.06■□□□□ 0.32
PAF1-205ENST00000595797 KIF7Q2M1P5 1343 aa17.05■□□□□ 0.32
PAF1-205ENST00000595797 RNF123Q5XPI4 1314 aa17.05■□□□□ 0.32
PAF1-205ENST00000595797 SNRPA1P09661 255 aaKnown RBP17.05■□□□□ 0.32
PAF1-205ENST00000595797 IARSP41252 1262 aaKnown RBP17.05■□□□□ 0.32
PAF1-205ENST00000595797 EIF6P56537 245 aaKnown RBP17.04■□□□□ 0.32
PAF1-205ENST00000595797 CNTROBQ8N137 903 aa17.04■□□□□ 0.32
PAF1-205ENST00000595797 NUDCQ9Y266 331 aa17.04■□□□□ 0.32
PAF1-205ENST00000595797 GJA3Q9Y6H8 435 aa17.04■□□□□ 0.32
PAF1-205ENST00000595797 PRKAR2BP31323 418 aa17.03■□□□□ 0.32
PAF1-205ENST00000595797 MAP1SQ66K74 1059 aaPredicted RBP17.03■□□□□ 0.32
PAF1-205ENST00000595797 GPC2Q8N158 579 aa17.03■□□□□ 0.32
PAF1-205ENST00000595797 TMX4Q9H1E5 349 aaPredicted RBP17.03■□□□□ 0.32
PAF1-205ENST00000595797 WBP1LQ9NX94 342 aa17.03■□□□□ 0.32
PAF1-205ENST00000595797 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
PAF1-205ENST00000595797 TRPM7Q96QT4 1865 aa17.02■□□□□ 0.32
PAF1-205ENST00000595797 COL3A1P02461 1466 aaPredicted RBP17.02■□□□□ 0.32
PAF1-205ENST00000595797 KCNQ3O43525 872 aa17.02■□□□□ 0.32
PAF1-205ENST00000595797 ITGBL1O95965 494 aaPredicted RBP17.02■□□□□ 0.32
PAF1-205ENST00000595797 ECE1P42892 770 aa17.02■□□□□ 0.32
PAF1-205ENST00000595797 GRM1Q13255 1194 aa17.02■□□□□ 0.32
PAF1-205ENST00000595797 SYNE4Q8N205 404 aa17.02■□□□□ 0.32
PAF1-205ENST00000595797 NYXQ9GZU5 481 aa17.02■□□□□ 0.32
PAF1-205ENST00000595797 CEMIPQ8WUJ3 1361 aa17.02■□□□□ 0.31
PAF1-205ENST00000595797 WDR33Q9C0J8 1336 aaKnown RBP17.01■□□□□ 0.31
PAF1-205ENST00000595797 RASSF10A6NK89 507 aa17.01■□□□□ 0.31
PAF1-205ENST00000595797 C7orf43Q8WVR3 580 aa17.01■□□□□ 0.31
PAF1-205ENST00000595797 RPGRQ92834 1020 aaKnown RBP17.01■□□□□ 0.31
PAF1-205ENST00000595797 ADAMTSL1Q8N6G6 1762 aa17.01■□□□□ 0.31
PAF1-205ENST00000595797 LAMB4A4D0S4 1761 aa17■□□□□ 0.31
PAF1-205ENST00000595797 NEFMP07197 916 aa17■□□□□ 0.31
PAF1-205ENST00000595797 CC2D2BQ6DHV5 1058 aa17■□□□□ 0.31
PAF1-205ENST00000595797 RGL2O15211 777 aa16.99■□□□□ 0.31
PAF1-205ENST00000595797 OLFM4Q6UX06 510 aa16.99■□□□□ 0.31
PAF1-205ENST00000595797 ABHD8Q96I13 439 aa16.99■□□□□ 0.31
PAF1-205ENST00000595797 NUP98P52948 1817 aa16.98■□□□□ 0.31
PAF1-205ENST00000595797 FZD9O00144 591 aa16.98■□□□□ 0.31
PAF1-205ENST00000595797 U2AF1L5P0DN76 240 aaPredicted RBP16.98■□□□□ 0.31
PAF1-205ENST00000595797 HSPA8P11142 646 aaKnown RBP16.98■□□□□ 0.31
PAF1-205ENST00000595797 U2AF1Q01081 240 aaKnown RBP eCLIP16.98■□□□□ 0.31
PAF1-205ENST00000595797 KIF6Q6ZMV9 814 aa16.98■□□□□ 0.31
PAF1-205ENST00000595797 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
PAF1-205ENST00000595797 PRAMEF22A3QJZ6 481 aa16.97■□□□□ 0.31
PAF1-205ENST00000595797 KLRG2A4D1S0 409 aaPredicted RBP16.97■□□□□ 0.31
PAF1-205ENST00000595797 FAM161AQ3B820 660 aa16.97■□□□□ 0.31
PAF1-205ENST00000595797 GRIPAP1Q4V328 841 aa16.97■□□□□ 0.31
PAF1-205ENST00000595797 MCM10Q7L590 875 aa16.97■□□□□ 0.31
PAF1-205ENST00000595797 NGEFQ8N5V2 710 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms