RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 GIGYF1O75420 1035 aaPredicted RBP18.5■□□□□ 0.55
ZNF541-205ENST00000595558 RHPN1Q8TCX5 695 aa18.5■□□□□ 0.55
ZNF541-205ENST00000595558 SPG7Q9UQ90 795 aa18.5■□□□□ 0.55
ZNF541-205ENST00000595558 CNPY2Q9Y2B0 182 aa18.5■□□□□ 0.55
ZNF541-205ENST00000595558 SNX14Q9Y5W7 946 aa18.5■□□□□ 0.55
ZNF541-205ENST00000595558 KLHDC4Q8TBB5 520 aa18.49■□□□□ 0.55
ZNF541-205ENST00000595558 CWC27Q6UX04 472 aaKnown RBP18.48■□□□□ 0.55
ZNF541-205ENST00000595558 SGSM2O43147 1006 aa18.48■□□□□ 0.55
ZNF541-205ENST00000595558 AK2P54819 239 aa18.48■□□□□ 0.55
ZNF541-205ENST00000595558 IL17RAQ96F46 866 aa18.48■□□□□ 0.55
ZNF541-205ENST00000595558 ZNF830Q96NB3 372 aaPredicted RBP18.48■□□□□ 0.55
ZNF541-205ENST00000595558 CSB-PGBD3P0DP91 1061 aa18.47■□□□□ 0.55
ZNF541-205ENST00000595558 GLIPR1L2Q4G1C9 344 aa18.47■□□□□ 0.55
ZNF541-205ENST00000595558 RUFY3Q7L099 469 aa18.47■□□□□ 0.55
ZNF541-205ENST00000595558 LSG1Q9H089 658 aaKnown RBP18.47■□□□□ 0.55
ZNF541-205ENST00000595558 FAM13BQ9NYF5 915 aa18.47■□□□□ 0.55
ZNF541-205ENST00000595558 LARGE1O95461 756 aa18.47■□□□□ 0.55
ZNF541-205ENST00000595558 POLA2Q14181 598 aa18.47■□□□□ 0.55
ZNF541-205ENST00000595558 CCDC39Q9UFE4 941 aa18.47■□□□□ 0.55
ZNF541-205ENST00000595558 TCHHQ07283 1943 aa18.46■□□□□ 0.55
ZNF541-205ENST00000595558 DDX54Q8TDD1 881 aaKnown RBP18.46■□□□□ 0.55
ZNF541-205ENST00000595558 TTC14Q96N46 770 aa18.46■□□□□ 0.55
ZNF541-205ENST00000595558 C19orf44Q9H6X5 657 aa18.46■□□□□ 0.55
ZNF541-205ENST00000595558 RAD50Q92878 1312 aa18.46■□□□□ 0.55
ZNF541-205ENST00000595558 WDR33Q9C0J8 1336 aaKnown RBP18.46■□□□□ 0.55
ZNF541-205ENST00000595558 ERBB3P21860 1342 aa18.45■□□□□ 0.54
ZNF541-205ENST00000595558 UQCRHLA0A096LP55 91 aa18.45■□□□□ 0.54
ZNF541-205ENST00000595558 UQCRHP07919 91 aa18.45■□□□□ 0.54
ZNF541-205ENST00000595558 OS9Q13438 667 aaPredicted RBP18.45■□□□□ 0.54
ZNF541-205ENST00000595558 SIL1Q9H173 461 aa18.45■□□□□ 0.54
ZNF541-205ENST00000595558 C9orf78Q9NZ63 289 aaPredicted RBP18.45■□□□□ 0.54
ZNF541-205ENST00000595558 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.45■□□□□ 0.54
ZNF541-205ENST00000595558 PTMAP06454 111 aaKnown RBP18.45■□□□□ 0.54
ZNF541-205ENST00000595558 ZMYND15Q9H091 742 aa18.44■□□□□ 0.54
ZNF541-205ENST00000595558 PDCL3Q9H2J4 239 aa18.44■□□□□ 0.54
ZNF541-205ENST00000595558 USP25Q9UHP3 1055 aa18.44■□□□□ 0.54
ZNF541-205ENST00000595558 AOX1Q06278 1338 aa18.44■□□□□ 0.54
ZNF541-205ENST00000595558 ATF3P18847 181 aa18.44■□□□□ 0.54
ZNF541-205ENST00000595558 SYT1P21579 422 aa18.44■□□□□ 0.54
ZNF541-205ENST00000595558 DBF4Q9UBU7 674 aaPredicted RBP18.44■□□□□ 0.54
ZNF541-205ENST00000595558 TMEM94Q12767 1356 aa18.43■□□□□ 0.54
ZNF541-205ENST00000595558 PXDNLA1KZ92 1463 aa18.43■□□□□ 0.54
ZNF541-205ENST00000595558 CACNA1FO60840 1977 aa18.43■□□□□ 0.54
ZNF541-205ENST00000595558 COL9A3Q14050 684 aaPredicted RBP18.43■□□□□ 0.54
ZNF541-205ENST00000595558 ADCK5Q3MIX3 580 aa18.43■□□□□ 0.54
ZNF541-205ENST00000595558 SYAP1Q96A49 352 aaPredicted RBP18.43■□□□□ 0.54
ZNF541-205ENST00000595558 USP16Q9Y5T5 823 aa18.43■□□□□ 0.54
ZNF541-205ENST00000595558 C1orf167Q5SNV9 1468 aa18.43■□□□□ 0.54
ZNF541-205ENST00000595558 FIBPO43427 364 aa18.42■□□□□ 0.54
ZNF541-205ENST00000595558 RAB11FIP3O75154 756 aa18.42■□□□□ 0.54
ZNF541-205ENST00000595558 PTH1RQ03431 593 aa18.42■□□□□ 0.54
ZNF541-205ENST00000595558 AMOTQ4VCS5 1084 aa18.42■□□□□ 0.54
ZNF541-205ENST00000595558 KAZALD1Q96I82 304 aa18.42■□□□□ 0.54
ZNF541-205ENST00000595558 ARID3AQ99856 593 aa18.42■□□□□ 0.54
ZNF541-205ENST00000595558 ZSCAN22P10073 491 aaPredicted RBP18.42■□□□□ 0.54
ZNF541-205ENST00000595558 HCLS1P14317 486 aaPredicted RBP18.42■□□□□ 0.54
ZNF541-205ENST00000595558 PDIA6Q15084 440 aa18.42■□□□□ 0.54
ZNF541-205ENST00000595558 C17orf53Q8N3J3 647 aaPredicted RBP18.42■□□□□ 0.54
ZNF541-205ENST00000595558 RAPGEF4Q8WZA2 1011 aa18.42■□□□□ 0.54
ZNF541-205ENST00000595558 KIF1BPQ96EK5 621 aa18.42■□□□□ 0.54
ZNF541-205ENST00000595558 ZNF496Q96IT1 587 aaPredicted RBP18.42■□□□□ 0.54
ZNF541-205ENST00000595558 N4BP2Q86UW6 1770 aaPredicted RBP18.42■□□□□ 0.54
ZNF541-205ENST00000595558 RGPD5Q99666 1765 aa18.41■□□□□ 0.54
ZNF541-205ENST00000595558 STX6O43752 255 aa18.41■□□□□ 0.54
ZNF541-205ENST00000595558 CASTP20810 708 aaKnown RBP18.41■□□□□ 0.54
ZNF541-205ENST00000595558 TERF1P54274 439 aa18.41■□□□□ 0.54
ZNF541-205ENST00000595558 BABAM1Q9NWV8 329 aa18.41■□□□□ 0.54
ZNF541-205ENST00000595558 CNTROBQ8N137 903 aa18.4■□□□□ 0.54
ZNF541-205ENST00000595558 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
ZNF541-205ENST00000595558 MCM5P33992 734 aa18.4■□□□□ 0.54
ZNF541-205ENST00000595558 ZNF790Q6PG37 636 aa18.4■□□□□ 0.54
ZNF541-205ENST00000595558 CCDC83Q8IWF9 413 aa18.4■□□□□ 0.54
ZNF541-205ENST00000595558 LIMCH1Q9UPQ0 1083 aa18.4■□□□□ 0.54
ZNF541-205ENST00000595558 CCDC9Q9Y3X0 531 aaKnown RBP18.4■□□□□ 0.54
ZNF541-205ENST00000595558 CYP27B1O15528 508 aa18.39■□□□□ 0.54
ZNF541-205ENST00000595558 CCDC8Q9H0W5 538 aaPredicted RBP18.39■□□□□ 0.54
ZNF541-205ENST00000595558 TTC12Q9H892 705 aaPredicted RBP18.39■□□□□ 0.54
ZNF541-205ENST00000595558 NDUFB9Q9Y6M9 179 aa18.39■□□□□ 0.54
ZNF541-205ENST00000595558 EPHA10Q5JZY3 1008 aa18.39■□□□□ 0.53
ZNF541-205ENST00000595558 KSR2Q6VAB6 950 aa18.39■□□□□ 0.53
ZNF541-205ENST00000595558 TMEM87AQ8NBN3 555 aa18.39■□□□□ 0.53
ZNF541-205ENST00000595558 BICC1Q9H694 974 aaKnown RBP18.39■□□□□ 0.53
ZNF541-205ENST00000595558 HYPKQ9NX55 129 aa18.39■□□□□ 0.53
ZNF541-205ENST00000595558 TLR7Q9NYK1 1049 aaKnown RBP18.39■□□□□ 0.53
ZNF541-205ENST00000595558 ATP5J2-PTCD1G3V325 749 aa18.38■□□□□ 0.53
ZNF541-205ENST00000595558 PTCD1O75127 700 aaKnown RBP18.38■□□□□ 0.53
ZNF541-205ENST00000595558 IGKV5-2P06315 115 aa18.38■□□□□ 0.53
ZNF541-205ENST00000595558 CCDC183Q5T5S1 534 aa18.38■□□□□ 0.53
ZNF541-205ENST00000595558 GIMAP6Q6P9H5 292 aa18.38■□□□□ 0.53
ZNF541-205ENST00000595558 COPS6Q7L5N1 327 aa18.38■□□□□ 0.53
ZNF541-205ENST00000595558 XAGE3Q8WTP9 111 aa18.38■□□□□ 0.53
ZNF541-205ENST00000595558 SMC3Q9UQE7 1217 aa18.38■□□□□ 0.53
ZNF541-205ENST00000595558 ADCY5O95622 1261 aa18.38■□□□□ 0.53
ZNF541-205ENST00000595558 F13A1P00488 732 aa18.38■□□□□ 0.53
ZNF541-205ENST00000595558 DNM1Q05193 864 aaKnown RBP18.38■□□□□ 0.53
ZNF541-205ENST00000595558 ST3GAL1Q11201 340 aa18.38■□□□□ 0.53
ZNF541-205ENST00000595558 PRPF40BQ6NWY9 871 aaKnown RBP18.38■□□□□ 0.53
ZNF541-205ENST00000595558 PHF14O94880 888 aa18.37■□□□□ 0.53
ZNF541-205ENST00000595558 CHGBP05060 677 aa18.37■□□□□ 0.53
ZNF541-205ENST00000595558 RIC3Q7Z5B4 369 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms