RNA–Protein interactions for RNA: ENST00000595358.5

CCDC61-204, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC61, Length 1,817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-204ENST00000595358 MYD88Q99836 296 aa31.49■■■□□ 2.63
CCDC61-204ENST00000595358 AFDNP55196 1824 aaKnown RBP31.48■■■□□ 2.63
CCDC61-204ENST00000595358 TJP1Q07157 1748 aa31.47■■■□□ 2.63
CCDC61-204ENST00000595358 SSH3Q8TE77 659 aa31.47■■■□□ 2.63
CCDC61-204ENST00000595358 GJD4Q96KN9 370 aaPredicted RBP31.47■■■□□ 2.63
CCDC61-204ENST00000595358 TTLL7Q6ZT98 887 aa31.47■■■□□ 2.63
CCDC61-204ENST00000595358 GCKRQ14397 625 aa31.46■■■□□ 2.63
CCDC61-204ENST00000595358 CYP19A1P11511 503 aaPredicted RBP31.45■■■□□ 2.63
CCDC61-204ENST00000595358 POLA2Q14181 598 aa31.45■■■□□ 2.63
CCDC61-204ENST00000595358 PPP1R42Q7Z4L9 355 aa31.45■■■□□ 2.63
CCDC61-204ENST00000595358 ATRNO75882 1429 aa31.45■■■□□ 2.62
CCDC61-204ENST00000595358 MTX1Q13505 466 aa31.44■■■□□ 2.62
CCDC61-204ENST00000595358 ZBTB47Q9UFB7 747 aaPredicted RBP31.44■■■□□ 2.62
CCDC61-204ENST00000595358 A0A0G2JS52 829 aa31.42■■■□□ 2.62
CCDC61-204ENST00000595358 MYT1Q01538 1121 aa31.42■■■□□ 2.62
CCDC61-204ENST00000595358 TRPC5Q9UL62 973 aaPredicted RBP31.42■■■□□ 2.62
CCDC61-204ENST00000595358 CICQ96RK0 1608 aaPredicted RBP31.41■■■□□ 2.62
CCDC61-204ENST00000595358 SRGAP3O43295 1099 aa31.4■■■□□ 2.62
CCDC61-204ENST00000595358 KCNQ2O43526 872 aa31.4■■■□□ 2.62
CCDC61-204ENST00000595358 EXOC6BQ9Y2D4 811 aa31.4■■■□□ 2.62
CCDC61-204ENST00000595358 ONECUT3O60422 494 aaPredicted RBP31.4■■■□□ 2.62
CCDC61-204ENST00000595358 SMARCC1Q92922 1105 aaPredicted RBP31.39■■■□□ 2.62
CCDC61-204ENST00000595358 KAZALD1Q96I82 304 aa31.39■■■□□ 2.62
CCDC61-204ENST00000595358 SUCLG2Q96I99 432 aa31.39■■■□□ 2.62
CCDC61-204ENST00000595358 ATP5J2-PTCD1G3V325 749 aa31.38■■■□□ 2.61
CCDC61-204ENST00000595358 ZBTB3Q9H5J0 574 aa31.38■■■□□ 2.61
CCDC61-204ENST00000595358 LOC102724428A0A0B4J2F2 783 aa31.37■■■□□ 2.61
CCDC61-204ENST00000595358 APBB1O00213 710 aa31.37■■■□□ 2.61
CCDC61-204ENST00000595358 SMARCA5O60264 1052 aaPredicted RBP31.37■■■□□ 2.61
CCDC61-204ENST00000595358 SIK1P57059 783 aa31.37■■■□□ 2.61
CCDC61-204ENST00000595358 PALLDQ8WX93 1383 aa31.37■■■□□ 2.61
CCDC61-204ENST00000595358 PLEKHM2Q8IWE5 1019 aa31.36■■■□□ 2.61
CCDC61-204ENST00000595358 COL15A1P39059 1388 aa31.35■■■□□ 2.61
CCDC61-204ENST00000595358 ZBTB1Q9Y2K1 713 aa31.35■■■□□ 2.61
CCDC61-204ENST00000595358 LRRCC1Q9C099 1032 aa31.35■■■□□ 2.61
CCDC61-204ENST00000595358 BICC1Q9H694 974 aaKnown RBP31.35■■■□□ 2.61
CCDC61-204ENST00000595358 ATP6V1AP38606 617 aa31.34■■■□□ 2.61
CCDC61-204ENST00000595358 C16orf71Q8IYS4 520 aaPredicted RBP31.34■■■□□ 2.61
CCDC61-204ENST00000595358 ZNF330Q9Y3S2 320 aaPredicted RBP31.34■■■□□ 2.61
CCDC61-204ENST00000595358 ZNF831Q5JPB2 1677 aa31.34■■■□□ 2.61
CCDC61-204ENST00000595358 BMP2KLQ5H9B9 411 aa31.33■■■□□ 2.61
CCDC61-204ENST00000595358 KIF6Q6ZMV9 814 aa31.33■■■□□ 2.61
CCDC61-204ENST00000595358 RAB11FIP3O75154 756 aa31.33■■■□□ 2.61
CCDC61-204ENST00000595358 A0A087WZG4 1122 aa31.32■■■□□ 2.6
CCDC61-204ENST00000595358 SURF6O75683 361 aaKnown RBP31.32■■■□□ 2.6
CCDC61-204ENST00000595358 IL6STP40189 918 aaPredicted RBP31.32■■■□□ 2.6
CCDC61-204ENST00000595358 CCDC191Q8NCU4 936 aa31.32■■■□□ 2.6
CCDC61-204ENST00000595358 CWC25Q9NXE8 425 aaPredicted RBP31.32■■■□□ 2.6
CCDC61-204ENST00000595358 CASP7P55210 303 aa31.31■■■□□ 2.6
CCDC61-204ENST00000595358 NHSQ6T4R5 1651 aa31.31■■■□□ 2.6
CCDC61-204ENST00000595358 RREB1Q92766 1687 aa31.31■■■□□ 2.6
CCDC61-204ENST00000595358 MAP3K15Q6ZN16 1313 aa31.31■■■□□ 2.6
CCDC61-204ENST00000595358 TCIRG1Q13488 830 aa31.31■■■□□ 2.6
CCDC61-204ENST00000595358 QTRT2Q9H974 415 aaKnown RBP31.31■■■□□ 2.6
CCDC61-204ENST00000595358 NOP58Q9Y2X3 529 aaKnown RBP31.31■■■□□ 2.6
CCDC61-204ENST00000595358 UBE3BQ7Z3V4 1068 aa31.3■■■□□ 2.6
CCDC61-204ENST00000595358 ISCA1Q9BUE6 129 aa31.3■■■□□ 2.6
CCDC61-204ENST00000595358 H7C1W4 665 aa31.29■■■□□ 2.6
CCDC61-204ENST00000595358 ITPK1Q13572 414 aa31.29■■■□□ 2.6
CCDC61-204ENST00000595358 HSP90AB4PQ58FF6 505 aa31.29■■■□□ 2.6
CCDC61-204ENST00000595358 OTUD7AQ8TE49 926 aaPredicted RBP31.29■■■□□ 2.6
CCDC61-204ENST00000595358 TRIM28Q13263 835 aaKnown RBP31.28■■■□□ 2.6
CCDC61-204ENST00000595358 INTS5Q6P9B9 1019 aaKnown RBP31.28■■■□□ 2.6
CCDC61-204ENST00000595358 BTAF1O14981 1849 aa31.28■■■□□ 2.6
CCDC61-204ENST00000595358 MYH14Q7Z406 1995 aaKnown RBP31.28■■■□□ 2.6
CCDC61-204ENST00000595358 SEPT12Q8IYM1 358 aa31.28■■■□□ 2.6
CCDC61-204ENST00000595358 CCDC87Q9NVE4 849 aa31.28■■■□□ 2.6
CCDC61-204ENST00000595358 COL5A3P25940 1745 aaPredicted RBP31.28■■■□□ 2.6
CCDC61-204ENST00000595358 GIGYF2Q6Y7W6 1299 aaKnown RBP31.27■■■□□ 2.6
CCDC61-204ENST00000595358 SBF2Q86WG5 1849 aa31.27■■■□□ 2.6
CCDC61-204ENST00000595358 CRKLP46109 303 aaKnown RBP31.26■■■□□ 2.6
CCDC61-204ENST00000595358 EPHA10Q5JZY3 1008 aa31.26■■■□□ 2.6
CCDC61-204ENST00000595358 RABL6Q3YEC7 729 aaPredicted RBP31.26■■■□□ 2.59
CCDC61-204ENST00000595358 JARID2Q92833 1246 aaPredicted RBP31.26■■■□□ 2.59
CCDC61-204ENST00000595358 BCL11AQ9H165 835 aa31.26■■■□□ 2.59
CCDC61-204ENST00000595358 EIF5P55010 431 aaKnown RBP31.25■■■□□ 2.59
CCDC61-204ENST00000595358 KIF1BPQ96EK5 621 aa31.25■■■□□ 2.59
CCDC61-204ENST00000595358 OSBPL3Q9H4L5 887 aa31.25■■■□□ 2.59
CCDC61-204ENST00000595358 PTF1AQ7RTS3 328 aa31.24■■■□□ 2.59
CCDC61-204ENST00000595358 RHPN1Q8TCX5 695 aa31.24■■■□□ 2.59
CCDC61-204ENST00000595358 NUP98P52948 1817 aa31.24■■■□□ 2.59
CCDC61-204ENST00000595358 SALL3Q9BXA9 1300 aa31.24■■■□□ 2.59
CCDC61-204ENST00000595358 SEC24BO95487 1268 aa31.24■■■□□ 2.59
CCDC61-204ENST00000595358 FAM182BQ5T319 152 aa31.24■■■□□ 2.59
CCDC61-204ENST00000595358 TTC22Q5TAA0 569 aa31.24■■■□□ 2.59
CCDC61-204ENST00000595358 ARXQ96QS3 562 aa31.24■■■□□ 2.59
CCDC61-204ENST00000595358 ANKRD36CQ5JPF3 1778 aa31.23■■■□□ 2.59
CCDC61-204ENST00000595358 ERVV-1B6SEH8 477 aa31.23■■■□□ 2.59
CCDC61-204ENST00000595358 NPM2Q86SE8 214 aaKnown RBP31.23■■■□□ 2.59
CCDC61-204ENST00000595358 FBXO41Q8TF61 875 aa31.23■■■□□ 2.59
CCDC61-204ENST00000595358 GSPT1P15170 499 aaKnown RBP31.22■■■□□ 2.59
CCDC61-204ENST00000595358 ANP32AP39687 249 aaKnown RBP31.22■■■□□ 2.59
CCDC61-204ENST00000595358 HLFQ16534 295 aa31.22■■■□□ 2.59
CCDC61-204ENST00000595358 HSP90AB3PQ58FF7 597 aa31.22■■■□□ 2.59
CCDC61-204ENST00000595358 DZIP3Q86Y13 1208 aaKnown RBP31.21■■■□□ 2.59
CCDC61-204ENST00000595358 PDE1AP54750 535 aa31.21■■■□□ 2.59
CCDC61-204ENST00000595358 PA2G4Q9UQ80 394 aaKnown RBP31.21■■■□□ 2.59
CCDC61-204ENST00000595358 FOXO4P98177 505 aa31.19■■■□□ 2.58
CCDC61-204ENST00000595358 ERC1Q8IUD2 1116 aa31.19■■■□□ 2.58
CCDC61-204ENST00000595358 IL1RAPL2Q9NP60 686 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms