RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 PRPF40BQ6NWY9 871 aaKnown RBP13.17□□□□□ -0.3
NOTCH3-202ENST00000595045 ZNF790Q6PG37 636 aa13.17□□□□□ -0.3
NOTCH3-202ENST00000595045 PHACTR3Q96KR7 559 aa13.17□□□□□ -0.3
NOTCH3-202ENST00000595045 ARFGEF2Q9Y6D5 1785 aa13.17□□□□□ -0.3
NOTCH3-202ENST00000595045 TNRC18O15417 2968 aaPredicted RBP13.17□□□□□ -0.3
NOTCH3-202ENST00000595045 PDE4DIPQ5VU43 2346 aa13.16□□□□□ -0.3
NOTCH3-202ENST00000595045 A0A087WZG4 1122 aa13.16□□□□□ -0.3
NOTCH3-202ENST00000595045 STARD3NLO95772 234 aa13.16□□□□□ -0.3
NOTCH3-202ENST00000595045 EAPPQ56P03 285 aaPredicted RBP13.16□□□□□ -0.3
NOTCH3-202ENST00000595045 STYK1Q6J9G0 422 aa13.16□□□□□ -0.3
NOTCH3-202ENST00000595045 CNKSR1Q969H4 720 aa13.16□□□□□ -0.3
NOTCH3-202ENST00000595045 CEMIPQ8WUJ3 1361 aa13.16□□□□□ -0.3
NOTCH3-202ENST00000595045 NPC1L1Q9UHC9 1359 aa13.16□□□□□ -0.3
NOTCH3-202ENST00000595045 ADAMTSL1Q8N6G6 1762 aa13.15□□□□□ -0.3
NOTCH3-202ENST00000595045 RASSF10A6NK89 507 aa13.15□□□□□ -0.3
NOTCH3-202ENST00000595045 CAMTA2O94983 1202 aa13.15□□□□□ -0.3
NOTCH3-202ENST00000595045 A1BGP04217 495 aa13.15□□□□□ -0.3
NOTCH3-202ENST00000595045 SRGNP10124 158 aa13.15□□□□□ -0.3
NOTCH3-202ENST00000595045 SOGA3Q5TF21 947 aa13.15□□□□□ -0.3
NOTCH3-202ENST00000595045 CCER1Q8TC90 406 aaPredicted RBP13.15□□□□□ -0.3
NOTCH3-202ENST00000595045 TBC1D2BQ9UPU7 963 aa13.15□□□□□ -0.3
NOTCH3-202ENST00000595045 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.3
NOTCH3-202ENST00000595045 CNBD1Q8NA66 436 aa13.14□□□□□ -0.31
NOTCH3-202ENST00000595045 ZNF541Q9H0D2 1346 aa13.13□□□□□ -0.31
NOTCH3-202ENST00000595045 PRAMEF22A3QJZ6 481 aa13.13□□□□□ -0.31
NOTCH3-202ENST00000595045 GNAT3A8MTJ3 354 aa13.13□□□□□ -0.31
NOTCH3-202ENST00000595045 IL6STP40189 918 aaPredicted RBP13.13□□□□□ -0.31
NOTCH3-202ENST00000595045 MAP2K1Q02750 393 aaPredicted RBP13.13□□□□□ -0.31
NOTCH3-202ENST00000595045 DEFB115Q30KQ5 88 aa13.13□□□□□ -0.31
NOTCH3-202ENST00000595045 C7orf43Q8WVR3 580 aa13.13□□□□□ -0.31
NOTCH3-202ENST00000595045 MASTLQ96GX5 879 aa13.13□□□□□ -0.31
NOTCH3-202ENST00000595045 HACL1Q9UJ83 578 aa13.13□□□□□ -0.31
NOTCH3-202ENST00000595045 CLEC11AQ9Y240 323 aa13.13□□□□□ -0.31
NOTCH3-202ENST00000595045 ZNF330Q9Y3S2 320 aaPredicted RBP13.13□□□□□ -0.31
NOTCH3-202ENST00000595045 WDR33Q9C0J8 1336 aaKnown RBP13.13□□□□□ -0.31
NOTCH3-202ENST00000595045 NPHP1O15259 732 aa13.12□□□□□ -0.31
NOTCH3-202ENST00000595045 EPHX2P34913 555 aa13.12□□□□□ -0.31
NOTCH3-202ENST00000595045 ST5P78524 1137 aa13.12□□□□□ -0.31
NOTCH3-202ENST00000595045 MAP1SQ66K74 1059 aaPredicted RBP13.12□□□□□ -0.31
NOTCH3-202ENST00000595045 TTC5Q8N0Z6 440 aa13.12□□□□□ -0.31
NOTCH3-202ENST00000595045 CNTROBQ8N137 903 aa13.12□□□□□ -0.31
NOTCH3-202ENST00000595045 SETDB2Q96T68 719 aa13.12□□□□□ -0.31
NOTCH3-202ENST00000595045 RSPH6AQ9H0K4 717 aa13.12□□□□□ -0.31
NOTCH3-202ENST00000595045 USP16Q9Y5T5 823 aa13.12□□□□□ -0.31
NOTCH3-202ENST00000595045 MLLT1Q03111 559 aaPredicted RBP13.11□□□□□ -0.31
NOTCH3-202ENST00000595045 CCDC93Q567U6 631 aa13.11□□□□□ -0.31
NOTCH3-202ENST00000595045 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
NOTCH3-202ENST00000595045 ZNF277Q9NRM2 450 aaPredicted RBP13.11□□□□□ -0.31
NOTCH3-202ENST00000595045 BCORQ6W2J9 1755 aa13.1□□□□□ -0.31
NOTCH3-202ENST00000595045 CCDC85CA6NKD9 419 aa13.1□□□□□ -0.31
NOTCH3-202ENST00000595045 U2SURPO15042 1029 aaKnown RBP13.1□□□□□ -0.31
NOTCH3-202ENST00000595045 PIP4K2AP48426 406 aaPredicted RBP13.1□□□□□ -0.31
NOTCH3-202ENST00000595045 RGS19P49795 217 aa13.1□□□□□ -0.31
NOTCH3-202ENST00000595045 FKBP4Q02790 459 aaKnown RBP eCLIP13.1□□□□□ -0.31
NOTCH3-202ENST00000595045 TEX13AQ9BXU3 409 aaPredicted RBP13.1□□□□□ -0.31
NOTCH3-202ENST00000595045 PCDH10Q9P2E7 1040 aa13.1□□□□□ -0.31
NOTCH3-202ENST00000595045 ABT1Q9ULW3 272 aaKnown RBP13.1□□□□□ -0.31
NOTCH3-202ENST00000595045 RNF123Q5XPI4 1314 aa13.1□□□□□ -0.31
NOTCH3-202ENST00000595045 KLRG2A4D1S0 409 aaPredicted RBP13.09□□□□□ -0.31
NOTCH3-202ENST00000595045 NBPF26B4DH59 902 aa13.09□□□□□ -0.31
NOTCH3-202ENST00000595045 PRKAR2BP31323 418 aa13.09□□□□□ -0.31
NOTCH3-202ENST00000595045 TEFQ10587 303 aa13.09□□□□□ -0.31
NOTCH3-202ENST00000595045 NBPF10Q6P3W6 841 aaKnown RBP13.09□□□□□ -0.31
NOTCH3-202ENST00000595045 OLFM4Q6UX06 510 aa13.09□□□□□ -0.31
NOTCH3-202ENST00000595045 PNMA8AQ86V59 439 aaPredicted RBP13.09□□□□□ -0.31
NOTCH3-202ENST00000595045 NBPF15Q8N660 670 aa13.09□□□□□ -0.31
NOTCH3-202ENST00000595045 FMNL2Q96PY5 1086 aa13.09□□□□□ -0.31
NOTCH3-202ENST00000595045 THSD7BQ9C0I4 1608 aa13.09□□□□□ -0.31
NOTCH3-202ENST00000595045 SIPA1L3O60292 1781 aaPredicted RBP13.08□□□□□ -0.32
NOTCH3-202ENST00000595045 NPR1P16066 1061 aa13.08□□□□□ -0.32
NOTCH3-202ENST00000595045 DDX21Q9NR30 783 aaKnown RBP eCLIP13.08□□□□□ -0.32
NOTCH3-202ENST00000595045 BTBD11A6QL63 1104 aa13.07□□□□□ -0.32
NOTCH3-202ENST00000595045 FZD9O00144 591 aa13.07□□□□□ -0.32
NOTCH3-202ENST00000595045 CNGB1Q14028 1251 aaPredicted RBP13.07□□□□□ -0.32
NOTCH3-202ENST00000595045 NBPF5PQ86XG9 351 aaPredicted RBP13.07□□□□□ -0.32
NOTCH3-202ENST00000595045 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
NOTCH3-202ENST00000595045 TRPM7Q96QT4 1865 aa13.06□□□□□ -0.32
NOTCH3-202ENST00000595045 IARSP41252 1262 aaKnown RBP13.06□□□□□ -0.32
NOTCH3-202ENST00000595045 FMR1Q06787 632 aaKnown RBP eCLIP13.06□□□□□ -0.32
NOTCH3-202ENST00000595045 MCM10Q7L590 875 aa13.06□□□□□ -0.32
NOTCH3-202ENST00000595045 NPM2Q86SE8 214 aaKnown RBP13.06□□□□□ -0.32
NOTCH3-202ENST00000595045 RTKN2Q8IZC4 609 aa13.06□□□□□ -0.32
NOTCH3-202ENST00000595045 GPC2Q8N158 579 aa13.06□□□□□ -0.32
NOTCH3-202ENST00000595045 CAPNS2Q96L46 248 aa13.06□□□□□ -0.32
NOTCH3-202ENST00000595045 CASP8AP2Q9UKL3 1982 aa13.06□□□□□ -0.32
NOTCH3-202ENST00000595045 LTBP1Q14766 1721 aa13.05□□□□□ -0.32
NOTCH3-202ENST00000595045 DCTN1Q14203 1278 aa13.05□□□□□ -0.32
NOTCH3-202ENST00000595045 CYP4F22Q6NT55 531 aa13.05□□□□□ -0.32
NOTCH3-202ENST00000595045 CLEC4GQ6UXB4 293 aa13.05□□□□□ -0.32
NOTCH3-202ENST00000595045 SYNE4Q8N205 404 aa13.05□□□□□ -0.32
NOTCH3-202ENST00000595045 GPR101Q96P66 508 aaPredicted RBP13.05□□□□□ -0.32
NOTCH3-202ENST00000595045 BEGAINQ9BUH8 593 aa13.05□□□□□ -0.32
NOTCH3-202ENST00000595045 PPP2R1AP30153 589 aa13.04□□□□□ -0.32
NOTCH3-202ENST00000595045 ECE1P42892 770 aa13.04□□□□□ -0.32
NOTCH3-202ENST00000595045 GRM1Q13255 1194 aa13.04□□□□□ -0.32
NOTCH3-202ENST00000595045 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
NOTCH3-202ENST00000595045 TSKSQ9UJT2 592 aa13.04□□□□□ -0.32
NOTCH3-202ENST00000595045 SNRPA1P09661 255 aaKnown RBP13.03□□□□□ -0.32
NOTCH3-202ENST00000595045 HLFQ16534 295 aa13.03□□□□□ -0.32
NOTCH3-202ENST00000595045 SNED1Q8TER0 1413 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms