RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 UQCRHLA0A096LP55 91 aa18.77■□□□□ 0.6
PNKP-204ENST00000594661 PNMA6EA0A0J9YXQ4 647 aa18.77■□□□□ 0.6
PNKP-204ENST00000594661 APBB1O00213 710 aa18.77■□□□□ 0.6
PNKP-204ENST00000594661 UQCRHP07919 91 aa18.77■□□□□ 0.6
PNKP-204ENST00000594661 SNRPA1P09661 255 aaKnown RBP18.77■□□□□ 0.6
PNKP-204ENST00000594661 USP16Q9Y5T5 823 aa18.77■□□□□ 0.6
PNKP-204ENST00000594661 KSR2Q6VAB6 950 aa18.77■□□□□ 0.6
PNKP-204ENST00000594661 TOGARAM1Q9Y4F4 1720 aa18.76■□□□□ 0.59
PNKP-204ENST00000594661 ERVV-2B6SEH9 535 aa18.76■□□□□ 0.59
PNKP-204ENST00000594661 SMARCA5O60264 1052 aaPredicted RBP18.76■□□□□ 0.59
PNKP-204ENST00000594661 KIF20AO95235 890 aa18.76■□□□□ 0.59
PNKP-204ENST00000594661 NBPF7P0C2Y1 421 aaPredicted RBP18.76■□□□□ 0.59
PNKP-204ENST00000594661 ATP8B2P98198 1209 aa18.76■□□□□ 0.59
PNKP-204ENST00000594661 SKOR2Q2VWA4 1001 aaPredicted RBP18.76■□□□□ 0.59
PNKP-204ENST00000594661 TAF7LQ5H9L4 462 aa18.76■□□□□ 0.59
PNKP-204ENST00000594661 C16orf71Q8IYS4 520 aaPredicted RBP18.76■□□□□ 0.59
PNKP-204ENST00000594661 MYL6BP14649 208 aa18.76■□□□□ 0.59
PNKP-204ENST00000594661 AIMP1Q12904 312 aaKnown RBP18.76■□□□□ 0.59
PNKP-204ENST00000594661 IPO4Q8TEX9 1081 aaKnown RBP18.76■□□□□ 0.59
PNKP-204ENST00000594661 PRDM10Q9NQV6 1147 aa18.76■□□□□ 0.59
PNKP-204ENST00000594661 PAPPAQ13219 1627 aa18.75■□□□□ 0.59
PNKP-204ENST00000594661 PTMSP20962 102 aa18.75■□□□□ 0.59
PNKP-204ENST00000594661 PPP4R3BQ5MIZ7 849 aa18.75■□□□□ 0.59
PNKP-204ENST00000594661 PLEKHM2Q8IWE5 1019 aa18.75■□□□□ 0.59
PNKP-204ENST00000594661 GTPBP4Q9BZE4 634 aaKnown RBP18.75■□□□□ 0.59
PNKP-204ENST00000594661 UBR2Q8IWV8 1755 aa18.75■□□□□ 0.59
PNKP-204ENST00000594661 DISP2A7MBM2 1401 aa18.75■□□□□ 0.59
PNKP-204ENST00000594661 OTUD7AQ8TE49 926 aaPredicted RBP18.74■□□□□ 0.59
PNKP-204ENST00000594661 LAMB4A4D0S4 1761 aa18.74■□□□□ 0.59
PNKP-204ENST00000594661 DDIT3P35638 169 aa18.74■□□□□ 0.59
PNKP-204ENST00000594661 PIP4K2AP48426 406 aaPredicted RBP18.74■□□□□ 0.59
PNKP-204ENST00000594661 EXOC6BQ9Y2D4 811 aa18.74■□□□□ 0.59
PNKP-204ENST00000594661 IBTKQ9P2D0 1353 aaPredicted RBP18.73■□□□□ 0.59
PNKP-204ENST00000594661 PIP4K2BP78356 416 aa18.73■□□□□ 0.59
PNKP-204ENST00000594661 LRP10Q7Z4F1 713 aa18.73■□□□□ 0.59
PNKP-204ENST00000594661 KCPQ6ZWJ8 1503 aa18.73■□□□□ 0.59
PNKP-204ENST00000594661 PLCH1Q4KWH8 1693 aa18.73■□□□□ 0.59
PNKP-204ENST00000594661 CWF19L2Q2TBE0 894 aaKnown RBP18.73■□□□□ 0.59
PNKP-204ENST00000594661 XAGE3Q8WTP9 111 aa18.73■□□□□ 0.59
PNKP-204ENST00000594661 DDX58O95786 925 aaKnown RBP18.72■□□□□ 0.59
PNKP-204ENST00000594661 ALDH1L1O75891 902 aa18.71■□□□□ 0.59
PNKP-204ENST00000594661 ADAMTS2O95450 1211 aa18.71■□□□□ 0.59
PNKP-204ENST00000594661 NASPP49321 788 aaPredicted RBP18.71■□□□□ 0.59
PNKP-204ENST00000594661 NOL7Q9UMY1 257 aaKnown RBP18.71■□□□□ 0.59
PNKP-204ENST00000594661 GSPT1P15170 499 aaKnown RBP18.71■□□□□ 0.59
PNKP-204ENST00000594661 COPS6Q7L5N1 327 aa18.71■□□□□ 0.59
PNKP-204ENST00000594661 SPRYD3Q8NCJ5 442 aa18.71■□□□□ 0.59
PNKP-204ENST00000594661 CSPP1Q1MSJ5 1256 aa18.7■□□□□ 0.58
PNKP-204ENST00000594661 TBC1D9Q6ZT07 1266 aa18.7■□□□□ 0.58
PNKP-204ENST00000594661 PPP1R42Q7Z4L9 355 aa18.7■□□□□ 0.58
PNKP-204ENST00000594661 SSH3Q8TE77 659 aa18.7■□□□□ 0.58
PNKP-204ENST00000594661 TNS2Q63HR2 1409 aa18.7■□□□□ 0.58
PNKP-204ENST00000594661 TOM1O60784 492 aa18.7■□□□□ 0.58
PNKP-204ENST00000594661 LETM1O95202 739 aaPredicted RBP18.7■□□□□ 0.58
PNKP-204ENST00000594661 RIC3Q7Z5B4 369 aa18.7■□□□□ 0.58
PNKP-204ENST00000594661 LINS1Q8NG48 757 aa18.7■□□□□ 0.58
PNKP-204ENST00000594661 ANP32BQ92688 251 aaKnown RBP18.7■□□□□ 0.58
PNKP-204ENST00000594661 WNK3Q9BYP7 1800 aa18.69■□□□□ 0.58
PNKP-204ENST00000594661 TMEM51Q9NW97 253 aa18.69■□□□□ 0.58
PNKP-204ENST00000594661 NRAPQ86VF7 1730 aa18.69■□□□□ 0.58
PNKP-204ENST00000594661 POLA2Q14181 598 aa18.68■□□□□ 0.58
PNKP-204ENST00000594661 TTC22Q5TAA0 569 aa18.68■□□□□ 0.58
PNKP-204ENST00000594661 PTCD1O75127 700 aaKnown RBP18.68■□□□□ 0.58
PNKP-204ENST00000594661 IGKV5-2P06315 115 aa18.68■□□□□ 0.58
PNKP-204ENST00000594661 RBM25P49756 843 aaKnown RBP18.68■□□□□ 0.58
PNKP-204ENST00000594661 SASS6Q6UVJ0 657 aa18.68■□□□□ 0.58
PNKP-204ENST00000594661 C9orf78Q9NZ63 289 aaPredicted RBP18.68■□□□□ 0.58
PNKP-204ENST00000594661 CDC45O75419 566 aa18.67■□□□□ 0.58
PNKP-204ENST00000594661 TMOD3Q9NYL9 352 aa18.67■□□□□ 0.58
PNKP-204ENST00000594661 NUTM2BA6NNL0 878 aaPredicted RBP18.67■□□□□ 0.58
PNKP-204ENST00000594661 NUTM2EB1AL46 878 aaPredicted RBP18.67■□□□□ 0.58
PNKP-204ENST00000594661 SRGAP3O43295 1099 aa18.67■□□□□ 0.58
PNKP-204ENST00000594661 NUTM2AQ8IVF1 878 aaPredicted RBP18.67■□□□□ 0.58
PNKP-204ENST00000594661 GBP4Q96PP9 640 aa18.67■□□□□ 0.58
PNKP-204ENST00000594661 LRRCC1Q9C099 1032 aa18.67■□□□□ 0.58
PNKP-204ENST00000594661 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.67■□□□□ 0.58
PNKP-204ENST00000594661 CIZ1Q9ULV3 898 aaPredicted RBP18.67■□□□□ 0.58
PNKP-204ENST00000594661 NBPF26B4DH59 902 aa18.66■□□□□ 0.58
PNKP-204ENST00000594661 NBPF14Q5TI25 921 aa18.66■□□□□ 0.58
PNKP-204ENST00000594661 NBPF10Q6P3W6 841 aaKnown RBP18.66■□□□□ 0.58
PNKP-204ENST00000594661 NBPF15Q8N660 670 aa18.66■□□□□ 0.58
PNKP-204ENST00000594661 ANKRD13DQ6ZTN6 518 aa18.65■□□□□ 0.58
PNKP-204ENST00000594661 METTL22Q9BUU2 404 aaPredicted RBP18.65■□□□□ 0.58
PNKP-204ENST00000594661 ITGB4P16144 1822 aa18.65■□□□□ 0.58
PNKP-204ENST00000594661 ARFGEF2Q9Y6D5 1785 aa18.65■□□□□ 0.58
PNKP-204ENST00000594661 GRM8O00222 908 aa18.65■□□□□ 0.58
PNKP-204ENST00000594661 MCM5P33992 734 aa18.65■□□□□ 0.58
PNKP-204ENST00000594661 PIGBQ92521 554 aa18.65■□□□□ 0.58
PNKP-204ENST00000594661 TNPO1Q92973 898 aaKnown RBP18.65■□□□□ 0.58
PNKP-204ENST00000594661 MYD88Q99836 296 aa18.65■□□□□ 0.58
PNKP-204ENST00000594661 UTYO14607 1347 aa18.64■□□□□ 0.57
PNKP-204ENST00000594661 SALL3Q9BXA9 1300 aa18.64■□□□□ 0.57
PNKP-204ENST00000594661 NEURL1BA8MQ27 555 aa18.64■□□□□ 0.57
PNKP-204ENST00000594661 NEXNQ0ZGT2 675 aa18.64■□□□□ 0.57
PNKP-204ENST00000594661 PDLIM2Q96JY6 352 aa18.64■□□□□ 0.57
PNKP-204ENST00000594661 SURF6O75683 361 aaKnown RBP18.63■□□□□ 0.57
PNKP-204ENST00000594661 A1BGP04217 495 aa18.63■□□□□ 0.57
PNKP-204ENST00000594661 MTX1Q13505 466 aa18.63■□□□□ 0.57
PNKP-204ENST00000594661 TAF3Q5VWG9 929 aa18.63■□□□□ 0.57
PNKP-204ENST00000594661 KAZALD1Q96I82 304 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms