RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 PANK3Q9H999 370 aa11.58□□□□□ -0.56
SMG9-202ENST00000594081 RASSF10A6NK89 507 aa11.57□□□□□ -0.56
SMG9-202ENST00000594081 NPHP1O15259 732 aa11.57□□□□□ -0.56
SMG9-202ENST00000594081 HMOX1P09601 288 aa11.57□□□□□ -0.56
SMG9-202ENST00000594081 ST5P78524 1137 aa11.57□□□□□ -0.56
SMG9-202ENST00000594081 TBC1D2BQ9UPU7 963 aa11.57□□□□□ -0.56
SMG9-202ENST00000594081 LTBP1Q14766 1721 aa11.57□□□□□ -0.56
SMG9-202ENST00000594081 HEG1Q9ULI3 1381 aa11.56□□□□□ -0.56
SMG9-202ENST00000594081 MTHFSDQ2M296 383 aaKnown RBP11.56□□□□□ -0.56
SMG9-202ENST00000594081 CCDC93Q567U6 631 aa11.56□□□□□ -0.56
SMG9-202ENST00000594081 MASTLQ96GX5 879 aa11.56□□□□□ -0.56
SMG9-202ENST00000594081 HACL1Q9UJ83 578 aa11.56□□□□□ -0.56
SMG9-202ENST00000594081 RNF123Q5XPI4 1314 aa11.56□□□□□ -0.56
SMG9-202ENST00000594081 EPHX2P34913 555 aa11.55□□□□□ -0.56
SMG9-202ENST00000594081 DEFB115Q30KQ5 88 aa11.55□□□□□ -0.56
SMG9-202ENST00000594081 ZNF496Q96IT1 587 aaPredicted RBP11.55□□□□□ -0.56
SMG9-202ENST00000594081 SETDB2Q96T68 719 aa11.55□□□□□ -0.56
SMG9-202ENST00000594081 CLEC11AQ9Y240 323 aa11.55□□□□□ -0.56
SMG9-202ENST00000594081 WDR33Q9C0J8 1336 aaKnown RBP11.55□□□□□ -0.56
SMG9-202ENST00000594081 CAMTA2O94983 1202 aa11.54□□□□□ -0.56
SMG9-202ENST00000594081 IL6STP40189 918 aaPredicted RBP11.54□□□□□ -0.56
SMG9-202ENST00000594081 MAP2K1Q02750 393 aaPredicted RBP11.54□□□□□ -0.56
SMG9-202ENST00000594081 FKBP4Q02790 459 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMG9-202ENST00000594081 MAPK8IP2Q13387 824 aaPredicted RBP11.54□□□□□ -0.56
SMG9-202ENST00000594081 MAP1SQ66K74 1059 aaPredicted RBP11.54□□□□□ -0.56
SMG9-202ENST00000594081 C7orf43Q8WVR3 580 aa11.54□□□□□ -0.56
SMG9-202ENST00000594081 ZNF277Q9NRM2 450 aaPredicted RBP11.54□□□□□ -0.56
SMG9-202ENST00000594081 ABT1Q9ULW3 272 aaKnown RBP11.54□□□□□ -0.56
SMG9-202ENST00000594081 TRPM7Q96QT4 1865 aa11.53□□□□□ -0.56
SMG9-202ENST00000594081 MLLT1Q03111 559 aaPredicted RBP11.53□□□□□ -0.56
SMG9-202ENST00000594081 ZNF790Q6PG37 636 aa11.53□□□□□ -0.56
SMG9-202ENST00000594081 PNMA8AQ86V59 439 aaPredicted RBP11.53□□□□□ -0.56
SMG9-202ENST00000594081 CNTROBQ8N137 903 aa11.53□□□□□ -0.56
SMG9-202ENST00000594081 COL4A5P29400 1685 aa11.52□□□□□ -0.56
SMG9-202ENST00000594081 SNED1Q8TER0 1413 aa11.52□□□□□ -0.56
SMG9-202ENST00000594081 CCDC85CA6NKD9 419 aa11.52□□□□□ -0.57
SMG9-202ENST00000594081 OLFM4Q6UX06 510 aa11.52□□□□□ -0.57
SMG9-202ENST00000594081 NPM2Q86SE8 214 aaKnown RBP11.52□□□□□ -0.57
SMG9-202ENST00000594081 DZIP3Q86Y13 1208 aaKnown RBP11.52□□□□□ -0.57
SMG9-202ENST00000594081 TEX13AQ9BXU3 409 aaPredicted RBP11.52□□□□□ -0.57
SMG9-202ENST00000594081 COL3A1P02461 1466 aaPredicted RBP11.51□□□□□ -0.57
SMG9-202ENST00000594081 A1BGP04217 495 aa11.51□□□□□ -0.57
SMG9-202ENST00000594081 NPR1P16066 1061 aa11.51□□□□□ -0.57
SMG9-202ENST00000594081 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
SMG9-202ENST00000594081 TEFQ10587 303 aa11.51□□□□□ -0.57
SMG9-202ENST00000594081 NBPF5PQ86XG9 351 aaPredicted RBP11.51□□□□□ -0.57
SMG9-202ENST00000594081 DDX21Q9NR30 783 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMG9-202ENST00000594081 KNSTRNQ9Y448 316 aa11.51□□□□□ -0.57
SMG9-202ENST00000594081 FZD9O00144 591 aa11.5□□□□□ -0.57
SMG9-202ENST00000594081 PAXIP1Q6ZW49 1069 aaPredicted RBP11.5□□□□□ -0.57
SMG9-202ENST00000594081 GPC2Q8N158 579 aa11.5□□□□□ -0.57
SMG9-202ENST00000594081 CAPNS2Q96L46 248 aa11.5□□□□□ -0.57
SMG9-202ENST00000594081 FMNL2Q96PY5 1086 aa11.5□□□□□ -0.57
SMG9-202ENST00000594081 PCDH10Q9P2E7 1040 aa11.5□□□□□ -0.57
SMG9-202ENST00000594081 LAMB4A4D0S4 1761 aa11.49□□□□□ -0.57
SMG9-202ENST00000594081 HSPA5P11021 654 aaKnown RBP11.49□□□□□ -0.57
SMG9-202ENST00000594081 PIP4K2AP48426 406 aaPredicted RBP11.49□□□□□ -0.57
SMG9-202ENST00000594081 RGS19P49795 217 aa11.49□□□□□ -0.57
SMG9-202ENST00000594081 GRM1Q13255 1194 aa11.49□□□□□ -0.57
SMG9-202ENST00000594081 AMER1Q5JTC6 1135 aaPredicted RBP11.49□□□□□ -0.57
SMG9-202ENST00000594081 RTKN2Q8IZC4 609 aa11.49□□□□□ -0.57
SMG9-202ENST00000594081 BEGAINQ9BUH8 593 aa11.49□□□□□ -0.57
SMG9-202ENST00000594081 KLRG2A4D1S0 409 aaPredicted RBP11.48□□□□□ -0.57
SMG9-202ENST00000594081 GNAT3A8MTJ3 354 aa11.48□□□□□ -0.57
SMG9-202ENST00000594081 DIAPH1O60610 1272 aaKnown RBP11.48□□□□□ -0.57
SMG9-202ENST00000594081 ECE1P42892 770 aa11.48□□□□□ -0.57
SMG9-202ENST00000594081 EIF4G2P78344 907 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMG9-202ENST00000594081 FMR1Q06787 632 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMG9-202ENST00000594081 CYP4F22Q6NT55 531 aa11.48□□□□□ -0.57
SMG9-202ENST00000594081 IL17REQ8NFR9 667 aa11.48□□□□□ -0.57
SMG9-202ENST00000594081 TSKSQ9UJT2 592 aa11.48□□□□□ -0.57
SMG9-202ENST00000594081 TIMELESSQ9UNS1 1208 aa11.48□□□□□ -0.57
SMG9-202ENST00000594081 ZNF652Q9Y2D9 606 aa11.48□□□□□ -0.57
SMG9-202ENST00000594081 CEMIPQ8WUJ3 1361 aa11.48□□□□□ -0.57
SMG9-202ENST00000594081 ABCC12Q96J65 1359 aa11.47□□□□□ -0.57
SMG9-202ENST00000594081 LMOD1P29536 600 aaPredicted RBP11.47□□□□□ -0.57
SMG9-202ENST00000594081 CLEC4GQ6UXB4 293 aa11.47□□□□□ -0.57
SMG9-202ENST00000594081 SYNE4Q8N205 404 aa11.47□□□□□ -0.57
SMG9-202ENST00000594081 GAS2L2Q8NHY3 880 aa11.47□□□□□ -0.57
SMG9-202ENST00000594081 JDP2Q8WYK2 163 aa11.47□□□□□ -0.57
SMG9-202ENST00000594081 GPR101Q96P66 508 aaPredicted RBP11.47□□□□□ -0.57
SMG9-202ENST00000594081 KCNQ3O43525 872 aa11.46□□□□□ -0.57
SMG9-202ENST00000594081 SCNN1DP51172 638 aa11.46□□□□□ -0.57
SMG9-202ENST00000594081 PSMD1Q99460 953 aa11.46□□□□□ -0.57
SMG9-202ENST00000594081 NIP7Q9Y221 180 aaKnown RBP eCLIP11.46□□□□□ -0.57
SMG9-202ENST00000594081 GJA3Q9Y6H8 435 aa11.46□□□□□ -0.57
SMG9-202ENST00000594081 TLL2Q9Y6L7 1015 aa11.46□□□□□ -0.57
SMG9-202ENST00000594081 PRAMEF22A3QJZ6 481 aa11.45□□□□□ -0.58
SMG9-202ENST00000594081 FAM177BA6PVY3 158 aa11.45□□□□□ -0.58
SMG9-202ENST00000594081 TRAF5O00463 557 aa11.45□□□□□ -0.58
SMG9-202ENST00000594081 EIF6P56537 245 aaKnown RBP11.45□□□□□ -0.58
SMG9-202ENST00000594081 TPTE2Q6XPS3 522 aa11.45□□□□□ -0.58
SMG9-202ENST00000594081 CFAP44Q96MT7 982 aa11.45□□□□□ -0.58
SMG9-202ENST00000594081 USP16Q9Y5T5 823 aa11.45□□□□□ -0.58
SMG9-202ENST00000594081 RIC1Q4ADV7 1423 aa11.44□□□□□ -0.58
SMG9-202ENST00000594081 BTBD11A6QL63 1104 aa11.44□□□□□ -0.58
SMG9-202ENST00000594081 RGL2O15211 777 aa11.44□□□□□ -0.58
SMG9-202ENST00000594081 AOC2O75106 756 aa11.44□□□□□ -0.58
SMG9-202ENST00000594081 ALDH1B1P30837 517 aa11.44□□□□□ -0.58
SMG9-202ENST00000594081 EPS15P42566 896 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms