RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 MYH14Q7Z406 1995 aaKnown RBP16.59■□□□□ 0.25
VRK3-205ENST00000593919 CYP19A1P11511 503 aaPredicted RBP16.58■□□□□ 0.25
VRK3-205ENST00000593919 ANKRD13DQ6ZTN6 518 aa16.58■□□□□ 0.25
VRK3-205ENST00000593919 SMARCC1Q92922 1105 aaPredicted RBP16.58■□□□□ 0.25
VRK3-205ENST00000593919 BACH2Q9BYV9 841 aa16.58■□□□□ 0.25
VRK3-205ENST00000593919 COL5A3P25940 1745 aaPredicted RBP16.58■□□□□ 0.24
VRK3-205ENST00000593919 RBM6P78332 1123 aaKnown RBP16.58■□□□□ 0.24
VRK3-205ENST00000593919 USP44Q9H0E7 712 aa16.58■□□□□ 0.24
VRK3-205ENST00000593919 ADRA2BP18089 450 aa16.57■□□□□ 0.24
VRK3-205ENST00000593919 ATP6V1AP38606 617 aa16.57■□□□□ 0.24
VRK3-205ENST00000593919 NPM2Q86SE8 214 aaKnown RBP16.57■□□□□ 0.24
VRK3-205ENST00000593919 GNAI3P08754 354 aa16.57■□□□□ 0.24
VRK3-205ENST00000593919 SIRT2Q8IXJ6 389 aa16.57■□□□□ 0.24
VRK3-205ENST00000593919 CWF19L2Q2TBE0 894 aaKnown RBP16.56■□□□□ 0.24
VRK3-205ENST00000593919 TTLL7Q6ZT98 887 aa16.56■□□□□ 0.24
VRK3-205ENST00000593919 LINS1Q8NG48 757 aa16.56■□□□□ 0.24
VRK3-205ENST00000593919 RREB1Q92766 1687 aa16.56■□□□□ 0.24
VRK3-205ENST00000593919 LY75O60449 1722 aa16.55■□□□□ 0.24
VRK3-205ENST00000593919 ALDH1L1O75891 902 aa16.55■□□□□ 0.24
VRK3-205ENST00000593919 KRT27Q7Z3Y8 459 aa16.55■□□□□ 0.24
VRK3-205ENST00000593919 PLBD2Q8NHP8 589 aa16.55■□□□□ 0.24
VRK3-205ENST00000593919 METTL22Q9BUU2 404 aaPredicted RBP16.55■□□□□ 0.24
VRK3-205ENST00000593919 ZBTB1Q9Y2K1 713 aa16.55■□□□□ 0.24
VRK3-205ENST00000593919 ZNF330Q9Y3S2 320 aaPredicted RBP16.55■□□□□ 0.24
VRK3-205ENST00000593919 GNAI2P04899 355 aa16.55■□□□□ 0.24
VRK3-205ENST00000593919 ITPK1Q13572 414 aa16.55■□□□□ 0.24
VRK3-205ENST00000593919 CEP85Q6P2H3 762 aa16.55■□□□□ 0.24
VRK3-205ENST00000593919 IGKV5-2P06315 115 aa16.54■□□□□ 0.24
VRK3-205ENST00000593919 UBTFL1P0CB47 393 aaPredicted RBP16.54■□□□□ 0.24
VRK3-205ENST00000593919 NEXNQ0ZGT2 675 aa16.54■□□□□ 0.24
VRK3-205ENST00000593919 MYD88Q99836 296 aa16.54■□□□□ 0.24
VRK3-205ENST00000593919 NBPF7P0C2Y1 421 aaPredicted RBP16.53■□□□□ 0.24
VRK3-205ENST00000593919 RGS3P49796 1198 aa16.53■□□□□ 0.24
VRK3-205ENST00000593919 ANKRD44Q8N8A2 993 aa16.53■□□□□ 0.24
VRK3-205ENST00000593919 RPAP2Q8IXW5 612 aaPredicted RBP16.53■□□□□ 0.24
VRK3-205ENST00000593919 IPO9Q96P70 1041 aaKnown RBP16.53■□□□□ 0.24
VRK3-205ENST00000593919 ZBTB3Q9H5J0 574 aa16.53■□□□□ 0.24
VRK3-205ENST00000593919 NOP58Q9Y2X3 529 aaKnown RBP16.53■□□□□ 0.24
VRK3-205ENST00000593919 LRRFIP2Q9Y608 721 aaKnown RBP16.53■□□□□ 0.24
VRK3-205ENST00000593919 TAF1LQ8IZX4 1826 aa16.53■□□□□ 0.24
VRK3-205ENST00000593919 NEURL1BA8MQ27 555 aa16.52■□□□□ 0.24
VRK3-205ENST00000593919 CRKLP46109 303 aaKnown RBP16.52■□□□□ 0.24
VRK3-205ENST00000593919 SMC5Q8IY18 1101 aa16.52■□□□□ 0.24
VRK3-205ENST00000593919 RGS17Q9UGC6 210 aaPredicted RBP16.52■□□□□ 0.24
VRK3-205ENST00000593919 NUP98P52948 1817 aa16.52■□□□□ 0.23
VRK3-205ENST00000593919 FAM196AQ6ZSG2 479 aa16.51■□□□□ 0.23
VRK3-205ENST00000593919 CCDC87Q9NVE4 849 aa16.51■□□□□ 0.23
VRK3-205ENST00000593919 C9orf78Q9NZ63 289 aaPredicted RBP16.51■□□□□ 0.23
VRK3-205ENST00000593919 RXRBP28702 533 aa16.51■□□□□ 0.23
VRK3-205ENST00000593919 IL6STP40189 918 aaPredicted RBP16.51■□□□□ 0.23
VRK3-205ENST00000593919 INTS5Q6P9B9 1019 aaKnown RBP16.51■□□□□ 0.23
VRK3-205ENST00000593919 IBTKQ9P2D0 1353 aaPredicted RBP16.5■□□□□ 0.23
VRK3-205ENST00000593919 KCNQ4P56696 695 aa16.5■□□□□ 0.23
VRK3-205ENST00000593919 BCL11BQ9C0K0 894 aaPredicted RBP16.5■□□□□ 0.23
VRK3-205ENST00000593919 ANKRD36CQ5JPF3 1778 aa16.5■□□□□ 0.23
VRK3-205ENST00000593919 ATP5J2-PTCD1G3V325 749 aa16.49■□□□□ 0.23
VRK3-205ENST00000593919 GRM8O00222 908 aa16.49■□□□□ 0.23
VRK3-205ENST00000593919 GCKRQ14397 625 aa16.49■□□□□ 0.23
VRK3-205ENST00000593919 KIF6Q6ZMV9 814 aa16.49■□□□□ 0.23
VRK3-205ENST00000593919 PDZRN3Q9UPQ7 1066 aa16.49■□□□□ 0.23
VRK3-205ENST00000593919 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
VRK3-205ENST00000593919 UTYO14607 1347 aa16.49■□□□□ 0.23
VRK3-205ENST00000593919 EIF5P55010 431 aaKnown RBP16.48■□□□□ 0.23
VRK3-205ENST00000593919 GCC1Q96CN9 775 aa16.48■□□□□ 0.23
VRK3-205ENST00000593919 MAP3K15Q6ZN16 1313 aa16.48■□□□□ 0.23
VRK3-205ENST00000593919 PNMA6EA0A0J9YXQ4 647 aa16.47■□□□□ 0.23
VRK3-205ENST00000593919 POTEAQ6S8J7 498 aa16.47■□□□□ 0.23
VRK3-205ENST00000593919 HMMRO75330 724 aa16.47■□□□□ 0.23
VRK3-205ENST00000593919 CCNL1Q9UK58 526 aaPredicted RBP16.47■□□□□ 0.23
VRK3-205ENST00000593919 TRIM37O94972 964 aa16.46■□□□□ 0.23
VRK3-205ENST00000593919 ATP8B2P98198 1209 aa16.46■□□□□ 0.23
VRK3-205ENST00000593919 FAM161AQ3B820 660 aa16.46■□□□□ 0.23
VRK3-205ENST00000593919 DZIP3Q86Y13 1208 aaKnown RBP16.46■□□□□ 0.23
VRK3-205ENST00000593919 BCL11AQ9H165 835 aa16.46■□□□□ 0.23
VRK3-205ENST00000593919 ZBTB47Q9UFB7 747 aaPredicted RBP16.46■□□□□ 0.23
VRK3-205ENST00000593919 CNTNAP4Q9C0A0 1308 aa16.46■□□□□ 0.22
VRK3-205ENST00000593919 DCTPP1Q9H773 170 aa16.46■□□□□ 0.22
VRK3-205ENST00000593919 TBC1D2BQ9UPU7 963 aa16.46■□□□□ 0.22
VRK3-205ENST00000593919 TCIRG1Q13488 830 aa16.45■□□□□ 0.22
VRK3-205ENST00000593919 HLFQ16534 295 aa16.45■□□□□ 0.22
VRK3-205ENST00000593919 GIGYF2Q6Y7W6 1299 aaKnown RBP16.45■□□□□ 0.22
VRK3-205ENST00000593919 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
VRK3-205ENST00000593919 BCORQ6W2J9 1755 aa16.45■□□□□ 0.22
VRK3-205ENST00000593919 COL15A1P39059 1388 aa16.44■□□□□ 0.22
VRK3-205ENST00000593919 A0A087WZG4 1122 aa16.44■□□□□ 0.22
VRK3-205ENST00000593919 NUCB1Q02818 461 aa16.44■□□□□ 0.22
VRK3-205ENST00000593919 C8orf34Q49A92 452 aa16.44■□□□□ 0.22
VRK3-205ENST00000593919 CCDC191Q8NCU4 936 aa16.44■□□□□ 0.22
VRK3-205ENST00000593919 KAZALD1Q96I82 304 aa16.44■□□□□ 0.22
VRK3-205ENST00000593919 CWC25Q9NXE8 425 aaPredicted RBP16.44■□□□□ 0.22
VRK3-205ENST00000593919 HDAC5Q9UQL6 1122 aa16.44■□□□□ 0.22
VRK3-205ENST00000593919 C4BP0C0L5 1744 aa16.44■□□□□ 0.22
VRK3-205ENST00000593919 UBE3BQ7Z3V4 1068 aa16.44■□□□□ 0.22
VRK3-205ENST00000593919 PPP1R42Q7Z4L9 355 aa16.44■□□□□ 0.22
VRK3-205ENST00000593919 ISCA1Q9BUE6 129 aa16.44■□□□□ 0.22
VRK3-205ENST00000593919 ERVV-1B6SEH8 477 aa16.43■□□□□ 0.22
VRK3-205ENST00000593919 ANKRD45Q5TZF3 282 aa16.43■□□□□ 0.22
VRK3-205ENST00000593919 SSH3Q8TE77 659 aa16.43■□□□□ 0.22
VRK3-205ENST00000593919 JARID2Q92833 1246 aaPredicted RBP16.43■□□□□ 0.22
VRK3-205ENST00000593919 BICC1Q9H694 974 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms