RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ZNF652Q9Y2D9 606 aa30.15■■■□□ 2.42
SSBP4-203ENST00000593641 PRAMEF22A3QJZ6 481 aa30.14■■■□□ 2.42
SSBP4-203ENST00000593641 C21orf2O43822 256 aa30.14■■■□□ 2.42
SSBP4-203ENST00000593641 ARFGEF2Q9Y6D5 1785 aa30.13■■■□□ 2.41
SSBP4-203ENST00000593641 NEFMP07197 916 aa30.13■■■□□ 2.41
SSBP4-203ENST00000593641 VEGFAP15692 232 aaPredicted RBP30.13■■■□□ 2.41
SSBP4-203ENST00000593641 DCTN1Q14203 1278 aa30.13■■■□□ 2.41
SSBP4-203ENST00000593641 CNKSR1Q969H4 720 aa30.13■■■□□ 2.41
SSBP4-203ENST00000593641 CLEC4GQ6UXB4 293 aa30.12■■■□□ 2.41
SSBP4-203ENST00000593641 SLX4Q8IY92 1834 aa30.12■■■□□ 2.41
SSBP4-203ENST00000593641 DLG5Q8TDM6 1919 aa30.12■■■□□ 2.41
SSBP4-203ENST00000593641 NBPF5PQ86XG9 351 aaPredicted RBP30.11■■■□□ 2.41
SSBP4-203ENST00000593641 STYK1Q6J9G0 422 aa30.1■■■□□ 2.41
SSBP4-203ENST00000593641 MASTLQ96GX5 879 aa30.1■■■□□ 2.41
SSBP4-203ENST00000593641 LAMB4A4D0S4 1761 aa30.1■■■□□ 2.41
SSBP4-203ENST00000593641 HTRA3P83110 453 aa30.09■■■□□ 2.41
SSBP4-203ENST00000593641 DPY19L2Q6NUT2 758 aa30.09■■■□□ 2.41
SSBP4-203ENST00000593641 TAOK3Q9H2K8 898 aa30.09■■■□□ 2.41
SSBP4-203ENST00000593641 SRGNP10124 158 aa30.08■■■□□ 2.41
SSBP4-203ENST00000593641 TAF7Q15545 349 aaPredicted RBP30.08■■■□□ 2.41
SSBP4-203ENST00000593641 ERFEQ4G0M1 354 aa30.08■■■□□ 2.41
SSBP4-203ENST00000593641 SOGA3Q5TF21 947 aa30.08■■■□□ 2.41
SSBP4-203ENST00000593641 PRPF40BQ6NWY9 871 aaKnown RBP30.08■■■□□ 2.41
SSBP4-203ENST00000593641 KLRG1Q96E93 195 aa30.07■■■□□ 2.4
SSBP4-203ENST00000593641 LTBP3Q9NS15 1303 aa30.06■■■□□ 2.4
SSBP4-203ENST00000593641 RGL2O15211 777 aa30.05■■■□□ 2.4
SSBP4-203ENST00000593641 NBPF26B4DH59 902 aa30.04■■■□□ 2.4
SSBP4-203ENST00000593641 NBPF10Q6P3W6 841 aaKnown RBP30.04■■■□□ 2.4
SSBP4-203ENST00000593641 NBPF15Q8N660 670 aa30.04■■■□□ 2.4
SSBP4-203ENST00000593641 NIP7Q9Y221 180 aaKnown RBP eCLIP30.04■■■□□ 2.4
SSBP4-203ENST00000593641 KDM3BQ7LBC6 1761 aa30.04■■■□□ 2.4
SSBP4-203ENST00000593641 TPTE2Q6XPS3 522 aa30.03■■■□□ 2.4
SSBP4-203ENST00000593641 PNISRQ8TF01 805 aaKnown RBP30.03■■■□□ 2.4
SSBP4-203ENST00000593641 MIS18AQ9NYP9 233 aa30.02■■■□□ 2.4
SSBP4-203ENST00000593641 NPR1P16066 1061 aa30■■■□□ 2.39
SSBP4-203ENST00000593641 FAM177BA6PVY3 158 aa29.98■■■□□ 2.39
SSBP4-203ENST00000593641 CCDC93Q567U6 631 aa29.98■■■□□ 2.39
SSBP4-203ENST00000593641 JMYQ8N9B5 988 aa29.98■■■□□ 2.39
SSBP4-203ENST00000593641 PCNTO95613 3336 aa29.98■■■□□ 2.39
SSBP4-203ENST00000593641 NUP98P52948 1817 aa29.97■■■□□ 2.39
SSBP4-203ENST00000593641 POTECB2RU33 542 aa29.97■■■□□ 2.39
SSBP4-203ENST00000593641 GTF2E1P29083 439 aaPredicted RBP29.97■■■□□ 2.39
SSBP4-203ENST00000593641 PNNQ9H307 717 aaKnown RBP29.97■■■□□ 2.39
SSBP4-203ENST00000593641 MAPK8IP3Q9UPT6 1336 aa29.96■■■□□ 2.39
SSBP4-203ENST00000593641 KLRG2A4D1S0 409 aaPredicted RBP29.95■■■□□ 2.39
SSBP4-203ENST00000593641 NFE2L2Q16236 605 aa29.95■■■□□ 2.39
SSBP4-203ENST00000593641 HLFQ16534 295 aa29.95■■■□□ 2.39
SSBP4-203ENST00000593641 PLEKHF1Q96S99 279 aa29.95■■■□□ 2.39
SSBP4-203ENST00000593641 NGEFQ8N5V2 710 aa29.94■■■□□ 2.38
SSBP4-203ENST00000593641 C7orf43Q8WVR3 580 aa29.93■■■□□ 2.38
SSBP4-203ENST00000593641 DDNO94850 711 aaPredicted RBP29.92■■■□□ 2.38
SSBP4-203ENST00000593641 NYXQ9GZU5 481 aa29.92■■■□□ 2.38
SSBP4-203ENST00000593641 EIF4A1P60842 406 aaKnown RBP29.91■■■□□ 2.38
SSBP4-203ENST00000593641 KIF6Q6ZMV9 814 aa29.91■■■□□ 2.38
SSBP4-203ENST00000593641 THUMPD2Q9BTF0 503 aaKnown RBP29.91■■■□□ 2.38
SSBP4-203ENST00000593641 RRP7AQ9Y3A4 280 aaKnown RBP29.91■■■□□ 2.38
SSBP4-203ENST00000593641 SCN4AP35499 1836 aa29.9■■■□□ 2.38
SSBP4-203ENST00000593641 ERVV-1B6SEH8 477 aa29.9■■■□□ 2.38
SSBP4-203ENST00000593641 ALDH1B1P30837 517 aa29.9■■■□□ 2.38
SSBP4-203ENST00000593641 FKBP4Q02790 459 aaKnown RBP eCLIP29.9■■■□□ 2.38
SSBP4-203ENST00000593641 MAP3K15Q6ZN16 1313 aa29.9■■■□□ 2.38
SSBP4-203ENST00000593641 RTKN2Q8IZC4 609 aa29.89■■■□□ 2.38
SSBP4-203ENST00000593641 IQCA1LA6NCM1 817 aa29.88■■■□□ 2.37
SSBP4-203ENST00000593641 MYL6BP14649 208 aa29.87■■■□□ 2.37
SSBP4-203ENST00000593641 CHADLQ6NUI6 762 aa29.87■■■□□ 2.37
SSBP4-203ENST00000593641 ZNF277Q9NRM2 450 aaPredicted RBP29.86■■■□□ 2.37
SSBP4-203ENST00000593641 ABCC12Q96J65 1359 aa29.86■■■□□ 2.37
SSBP4-203ENST00000593641 TTLL7Q6ZT98 887 aa29.85■■■□□ 2.37
SSBP4-203ENST00000593641 NUTM1Q86Y26 1132 aa29.85■■■□□ 2.37
SSBP4-203ENST00000593641 OLFM4Q6UX06 510 aa29.84■■■□□ 2.37
SSBP4-203ENST00000593641 L3MBTL3Q96JM7 780 aaPredicted RBP29.84■■■□□ 2.37
SSBP4-203ENST00000593641 ZBTB3Q9H5J0 574 aa29.84■■■□□ 2.37
SSBP4-203ENST00000593641 TSPYL4Q9UJ04 414 aa29.84■■■□□ 2.37
SSBP4-203ENST00000593641 ERBB4Q15303 1308 aa29.84■■■□□ 2.37
SSBP4-203ENST00000593641 IBTKQ9P2D0 1353 aaPredicted RBP29.83■■■□□ 2.37
SSBP4-203ENST00000593641 CRY2Q49AN0 593 aa29.83■■■□□ 2.37
SSBP4-203ENST00000593641 GPTP24298 496 aa29.82■■■□□ 2.36
SSBP4-203ENST00000593641 POTEIP0CG38 1075 aa29.81■■■□□ 2.36
SSBP4-203ENST00000593641 POTEJP0CG39 1038 aa29.81■■■□□ 2.36
SSBP4-203ENST00000593641 RPGRQ92834 1020 aaKnown RBP29.81■■■□□ 2.36
SSBP4-203ENST00000593641 RIC1Q4ADV7 1423 aa29.8■■■□□ 2.36
SSBP4-203ENST00000593641 ZNF541Q9H0D2 1346 aa29.8■■■□□ 2.36
SSBP4-203ENST00000593641 IARSP41252 1262 aaKnown RBP29.8■■■□□ 2.36
SSBP4-203ENST00000593641 UBN2Q6ZU65 1347 aa29.79■■■□□ 2.36
SSBP4-203ENST00000593641 RIPK4P57078 832 aa29.79■■■□□ 2.36
SSBP4-203ENST00000593641 RALBP1Q15311 655 aa29.79■■■□□ 2.36
SSBP4-203ENST00000593641 LDHDQ86WU2 507 aa29.79■■■□□ 2.36
SSBP4-203ENST00000593641 SYNE4Q8N205 404 aa29.79■■■□□ 2.36
SSBP4-203ENST00000593641 TAF1DQ9H5J8 278 aaPredicted RBP29.79■■■□□ 2.36
SSBP4-203ENST00000593641 CREBZFQ9NS37 354 aa29.79■■■□□ 2.36
SSBP4-203ENST00000593641 CC2D2BQ6DHV5 1058 aa29.78■■■□□ 2.36
SSBP4-203ENST00000593641 LMOD3Q0VAK6 560 aa29.77■■■□□ 2.36
SSBP4-203ENST00000593641 GIGYF2Q6Y7W6 1299 aaKnown RBP29.77■■■□□ 2.36
SSBP4-203ENST00000593641 PSMD1Q99460 953 aa29.77■■■□□ 2.36
SSBP4-203ENST00000593641 COL13A1Q5TAT6 717 aaPredicted RBP29.76■■■□□ 2.35
SSBP4-203ENST00000593641 SUSD4Q5VX71 490 aa29.76■■■□□ 2.35
SSBP4-203ENST00000593641 ZNF34Q8IZ26 560 aa29.76■■■□□ 2.35
SSBP4-203ENST00000593641 HACL1Q9UJ83 578 aa29.76■■■□□ 2.35
SSBP4-203ENST00000593641 HSPA1AP0DMV8 641 aaKnown RBP29.75■■■□□ 2.35
SSBP4-203ENST00000593641 HSPA1BP0DMV9 641 aaKnown RBP29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms