RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 UTYO14607 1347 aa13.91□□□□□ -0.18
TPM4-213ENST00000591226 AHDC1Q5TGY3 1603 aaPredicted RBP13.9□□□□□ -0.18
TPM4-213ENST00000591226 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.18
TPM4-213ENST00000591226 SUCLG2Q96I99 432 aa13.9□□□□□ -0.18
TPM4-213ENST00000591226 STAP2Q9UGK3 403 aa13.9□□□□□ -0.18
TPM4-213ENST00000591226 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
TPM4-213ENST00000591226 NEXNQ0ZGT2 675 aa13.9□□□□□ -0.18
TPM4-213ENST00000591226 CASC1Q6TDU7 716 aa13.9□□□□□ -0.18
TPM4-213ENST00000591226 NUTM1Q86Y26 1132 aa13.9□□□□□ -0.18
TPM4-213ENST00000591226 MYD88Q99836 296 aa13.9□□□□□ -0.18
TPM4-213ENST00000591226 NEURL1BA8MQ27 555 aa13.89□□□□□ -0.19
TPM4-213ENST00000591226 NFKBIBQ15653 356 aa13.89□□□□□ -0.19
TPM4-213ENST00000591226 ANKRD13DQ6ZTN6 518 aa13.89□□□□□ -0.19
TPM4-213ENST00000591226 KIF1BPQ96EK5 621 aa13.89□□□□□ -0.19
TPM4-213ENST00000591226 KAZALD1Q96I82 304 aa13.89□□□□□ -0.19
TPM4-213ENST00000591226 METTL22Q9BUU2 404 aaPredicted RBP13.89□□□□□ -0.19
TPM4-213ENST00000591226 COL14A1Q05707 1796 aaKnown RBP13.89□□□□□ -0.19
TPM4-213ENST00000591226 HSCBQ8IWL3 235 aa13.89□□□□□ -0.19
TPM4-213ENST00000591226 SPRYD3Q8NCJ5 442 aa13.89□□□□□ -0.19
TPM4-213ENST00000591226 ANTXR1Q9H6X2 564 aa13.89□□□□□ -0.19
TPM4-213ENST00000591226 BICC1Q9H694 974 aaKnown RBP13.88□□□□□ -0.19
TPM4-213ENST00000591226 HDAC5Q9UQL6 1122 aa13.88□□□□□ -0.19
TPM4-213ENST00000591226 ARFGEF2Q9Y6D5 1785 aa13.88□□□□□ -0.19
TPM4-213ENST00000591226 COL16A1Q07092 1604 aaPredicted RBP13.88□□□□□ -0.19
TPM4-213ENST00000591226 LTBP4Q8N2S1 1624 aa13.88□□□□□ -0.19
TPM4-213ENST00000591226 OS9Q13438 667 aaPredicted RBP13.88□□□□□ -0.19
TPM4-213ENST00000591226 GCKRQ14397 625 aa13.88□□□□□ -0.19
TPM4-213ENST00000591226 PA2G4Q9UQ80 394 aaKnown RBP13.88□□□□□ -0.19
TPM4-213ENST00000591226 COL22A1Q8NFW1 1626 aaPredicted RBP13.88□□□□□ -0.19
TPM4-213ENST00000591226 NBPF26B4DH59 902 aa13.87□□□□□ -0.19
TPM4-213ENST00000591226 PTCD1O75127 700 aaKnown RBP13.87□□□□□ -0.19
TPM4-213ENST00000591226 HSP90AB4PQ58FF6 505 aa13.87□□□□□ -0.19
TPM4-213ENST00000591226 NBPF14Q5TI25 921 aa13.87□□□□□ -0.19
TPM4-213ENST00000591226 NBPF10Q6P3W6 841 aaKnown RBP13.87□□□□□ -0.19
TPM4-213ENST00000591226 NBPF15Q8N660 670 aa13.87□□□□□ -0.19
TPM4-213ENST00000591226 USP26Q9BXU7 913 aa13.87□□□□□ -0.19
TPM4-213ENST00000591226 AOX1Q06278 1338 aa13.87□□□□□ -0.19
TPM4-213ENST00000591226 TNS2Q63HR2 1409 aa13.87□□□□□ -0.19
TPM4-213ENST00000591226 SNX21Q969T3 373 aa13.87□□□□□ -0.19
TPM4-213ENST00000591226 AFDNP55196 1824 aaKnown RBP13.87□□□□□ -0.19
TPM4-213ENST00000591226 TRIM6-TRIM34B2RNG4 842 aa13.87□□□□□ -0.19
TPM4-213ENST00000591226 RBM42Q9BTD8 480 aaKnown RBP13.87□□□□□ -0.19
TPM4-213ENST00000591226 UNC5CLQ8IV45 518 aa13.86□□□□□ -0.19
TPM4-213ENST00000591226 RILPL2Q969X0 211 aa13.86□□□□□ -0.19
TPM4-213ENST00000591226 ERBB4Q15303 1308 aa13.86□□□□□ -0.19
TPM4-213ENST00000591226 DISP2A7MBM2 1401 aa13.86□□□□□ -0.19
TPM4-213ENST00000591226 ERC2O15083 957 aa13.86□□□□□ -0.19
TPM4-213ENST00000591226 A1BGP04217 495 aa13.85□□□□□ -0.19
TPM4-213ENST00000591226 PI4K2BQ8TCG2 481 aa13.85□□□□□ -0.19
TPM4-213ENST00000591226 TMOD3Q9NYL9 352 aa13.85□□□□□ -0.19
TPM4-213ENST00000591226 ATP5J2-PTCD1G3V325 749 aa13.85□□□□□ -0.19
TPM4-213ENST00000591226 CD2BP2O95400 341 aaKnown RBP13.85□□□□□ -0.19
TPM4-213ENST00000591226 EPHA10Q5JZY3 1008 aa13.85□□□□□ -0.19
TPM4-213ENST00000591226 IFNLR1Q8IU57 520 aaPredicted RBP13.85□□□□□ -0.19
TPM4-213ENST00000591226 PLBD2Q8NHP8 589 aa13.85□□□□□ -0.19
TPM4-213ENST00000591226 JARID2Q92833 1246 aaPredicted RBP13.85□□□□□ -0.19
TPM4-213ENST00000591226 REC8O95072 547 aa13.84□□□□□ -0.19
TPM4-213ENST00000591226 FRAT2O75474 233 aaPredicted RBP13.84□□□□□ -0.19
TPM4-213ENST00000591226 TTLL7Q6ZT98 887 aa13.84□□□□□ -0.19
TPM4-213ENST00000591226 ESYT1Q9BSJ8 1104 aa13.84□□□□□ -0.19
TPM4-213ENST00000591226 MAP4K4O95819 1239 aaPredicted RBP13.83□□□□□ -0.2
TPM4-213ENST00000591226 CHMLP26374 656 aa13.83□□□□□ -0.2
TPM4-213ENST00000591226 NUP188Q5SRE5 1749 aa13.83□□□□□ -0.2
TPM4-213ENST00000591226 ERC1Q8IUD2 1116 aa13.83□□□□□ -0.2
TPM4-213ENST00000591226 ZMYND15Q9H091 742 aa13.83□□□□□ -0.2
TPM4-213ENST00000591226 PLCH1Q4KWH8 1693 aa13.83□□□□□ -0.2
TPM4-213ENST00000591226 UBE3BQ7Z3V4 1068 aa13.82□□□□□ -0.2
TPM4-213ENST00000591226 CLASRPQ8N2M8 674 aaKnown RBP13.82□□□□□ -0.2
TPM4-213ENST00000591226 PIGBQ92521 554 aa13.82□□□□□ -0.2
TPM4-213ENST00000591226 ASAP1Q9ULH1 1129 aa13.82□□□□□ -0.2
TPM4-213ENST00000591226 AK9Q5TCS8 1911 aa13.82□□□□□ -0.2
TPM4-213ENST00000591226 USP42Q9H9J4 1324 aaKnown RBP13.82□□□□□ -0.2
TPM4-213ENST00000591226 KLHDC4Q8TBB5 520 aa13.82□□□□□ -0.2
TPM4-213ENST00000591226 PHLPP1O60346 1717 aa13.82□□□□□ -0.2
TPM4-213ENST00000591226 ITGB4P16144 1822 aa13.82□□□□□ -0.2
TPM4-213ENST00000591226 SIL1Q9H173 461 aa13.81□□□□□ -0.2
TPM4-213ENST00000591226 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.81□□□□□ -0.2
TPM4-213ENST00000591226 A0A087WZG4 1122 aa13.81□□□□□ -0.2
TPM4-213ENST00000591226 SASH1O94885 1247 aa13.81□□□□□ -0.2
TPM4-213ENST00000591226 ADAMTS2O95450 1211 aa13.81□□□□□ -0.2
TPM4-213ENST00000591226 G3BP1Q13283 466 aaKnown RBP eCLIP13.81□□□□□ -0.2
TPM4-213ENST00000591226 RABEP1Q15276 862 aa13.81□□□□□ -0.2
TPM4-213ENST00000591226 WNK3Q9BYP7 1800 aa13.81□□□□□ -0.2
TPM4-213ENST00000591226 TTC41PQ6P2S7 1318 aa13.8□□□□□ -0.2
TPM4-213ENST00000591226 CASP7P55210 303 aa13.8□□□□□ -0.2
TPM4-213ENST00000591226 AACSQ86V21 672 aa13.8□□□□□ -0.2
TPM4-213ENST00000591226 ZBTB3Q9H5J0 574 aa13.8□□□□□ -0.2
TPM4-213ENST00000591226 ATG3Q9NT62 314 aa13.8□□□□□ -0.2
TPM4-213ENST00000591226 K7ELQ4 463 aaPredicted RBP13.79□□□□□ -0.2
TPM4-213ENST00000591226 IFIT2P09913 472 aaKnown RBP13.79□□□□□ -0.2
TPM4-213ENST00000591226 COL15A1P39059 1388 aa13.79□□□□□ -0.2
TPM4-213ENST00000591226 DNAJC10Q8IXB1 793 aa13.79□□□□□ -0.2
TPM4-213ENST00000591226 BRPF3Q9ULD4 1205 aa13.79□□□□□ -0.2
TPM4-213ENST00000591226 KAT6BQ8WYB5 2073 aa13.79□□□□□ -0.2
TPM4-213ENST00000591226 TJP1Q07157 1748 aa13.79□□□□□ -0.2
TPM4-213ENST00000591226 GLRX3O76003 335 aaKnown RBP13.78□□□□□ -0.2
TPM4-213ENST00000591226 RABL6Q3YEC7 729 aaPredicted RBP13.78□□□□□ -0.2
TPM4-213ENST00000591226 IL25Q9H293 177 aa13.78□□□□□ -0.2
TPM4-213ENST00000591226 ANO2Q9NQ90 1003 aa13.78□□□□□ -0.2
TPM4-213ENST00000591226 ECHDC1Q9NTX5 307 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms