RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 BCL11BQ9C0K0 894 aaPredicted RBP12.4□□□□□ -0.42
PTPN2-210ENST00000591115 PHAXQ9H814 394 aaKnown RBP12.4□□□□□ -0.42
PTPN2-210ENST00000591115 HYPKQ9NX55 129 aa12.4□□□□□ -0.42
PTPN2-210ENST00000591115 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
PTPN2-210ENST00000591115 IBTKQ9P2D0 1353 aaPredicted RBP12.39□□□□□ -0.43
PTPN2-210ENST00000591115 BMP2KLQ5H9B9 411 aa12.39□□□□□ -0.43
PTPN2-210ENST00000591115 DNAAF4Q8WXU2 420 aa12.39□□□□□ -0.43
PTPN2-210ENST00000591115 FMNL2Q96PY5 1086 aa12.39□□□□□ -0.43
PTPN2-210ENST00000591115 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
PTPN2-210ENST00000591115 UPF2Q9HAU5 1272 aaKnown RBP12.39□□□□□ -0.43
PTPN2-210ENST00000591115 RREB1Q92766 1687 aa12.39□□□□□ -0.43
PTPN2-210ENST00000591115 MYH14Q7Z406 1995 aaKnown RBP12.38□□□□□ -0.43
PTPN2-210ENST00000591115 ERICH6Q7L0X2 663 aa12.38□□□□□ -0.43
PTPN2-210ENST00000591115 SLC4A9Q96Q91 983 aa12.38□□□□□ -0.43
PTPN2-210ENST00000591115 SRCIN1Q9C0H9 1055 aa12.38□□□□□ -0.43
PTPN2-210ENST00000591115 DDX21Q9NR30 783 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTPN2-210ENST00000591115 USP44Q9H0E7 712 aa12.37□□□□□ -0.43
PTPN2-210ENST00000591115 ALDH1L1O75891 902 aa12.37□□□□□ -0.43
PTPN2-210ENST00000591115 UBTFL1P0CB47 393 aaPredicted RBP12.37□□□□□ -0.43
PTPN2-210ENST00000591115 KCNQ4P56696 695 aa12.37□□□□□ -0.43
PTPN2-210ENST00000591115 ATP8B2P98198 1209 aa12.37□□□□□ -0.43
PTPN2-210ENST00000591115 BEND3Q5T5X7 828 aa12.37□□□□□ -0.43
PTPN2-210ENST00000591115 HDAC5Q9UQL6 1122 aa12.37□□□□□ -0.43
PTPN2-210ENST00000591115 C4BP0C0L5 1744 aa12.36□□□□□ -0.43
PTPN2-210ENST00000591115 NUP188Q5SRE5 1749 aa12.36□□□□□ -0.43
PTPN2-210ENST00000591115 LOC102724428A0A0B4J2F2 783 aa12.36□□□□□ -0.43
PTPN2-210ENST00000591115 PI4KAP2A4QPH2 592 aa12.36□□□□□ -0.43
PTPN2-210ENST00000591115 EIF5BO60841 1220 aaKnown RBP12.36□□□□□ -0.43
PTPN2-210ENST00000591115 DDX58O95786 925 aaKnown RBP12.36□□□□□ -0.43
PTPN2-210ENST00000591115 SNRPA1P09661 255 aaKnown RBP12.36□□□□□ -0.43
PTPN2-210ENST00000591115 SIK1P57059 783 aa12.36□□□□□ -0.43
PTPN2-210ENST00000591115 KSR2Q6VAB6 950 aa12.36□□□□□ -0.43
PTPN2-210ENST00000591115 DNAJC10Q8IXB1 793 aa12.36□□□□□ -0.43
PTPN2-210ENST00000591115 PI4KAP1Q8N8J0 262 aa12.36□□□□□ -0.43
PTPN2-210ENST00000591115 SMARCC1Q92922 1105 aaPredicted RBP12.36□□□□□ -0.43
PTPN2-210ENST00000591115 TUBGCP6Q96RT7 1819 aa12.36□□□□□ -0.43
PTPN2-210ENST00000591115 ADCY9O60503 1353 aa12.35□□□□□ -0.43
PTPN2-210ENST00000591115 ITPK1Q13572 414 aa12.35□□□□□ -0.43
PTPN2-210ENST00000591115 SEC24BO95487 1268 aa12.34□□□□□ -0.43
PTPN2-210ENST00000591115 PIP4K2AP48426 406 aaPredicted RBP12.34□□□□□ -0.43
PTPN2-210ENST00000591115 USP16Q9Y5T5 823 aa12.34□□□□□ -0.43
PTPN2-210ENST00000591115 ERBB4Q15303 1308 aa12.34□□□□□ -0.43
PTPN2-210ENST00000591115 APBA3O96018 575 aa12.33□□□□□ -0.43
PTPN2-210ENST00000591115 ATP6V1AP38606 617 aa12.33□□□□□ -0.43
PTPN2-210ENST00000591115 PDIA6Q15084 440 aa12.33□□□□□ -0.43
PTPN2-210ENST00000591115 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.43
PTPN2-210ENST00000591115 TBC1D32Q96NH3 1257 aa12.33□□□□□ -0.43
PTPN2-210ENST00000591115 ANP32EQ9BTT0 268 aa12.33□□□□□ -0.43
PTPN2-210ENST00000591115 CCNL1Q9UK58 526 aaPredicted RBP12.33□□□□□ -0.43
PTPN2-210ENST00000591115 LRRFIP2Q9Y608 721 aaKnown RBP12.33□□□□□ -0.43
PTPN2-210ENST00000591115 UBR3Q6ZT12 1888 aa12.33□□□□□ -0.44
PTPN2-210ENST00000591115 C4AP0C0L4 1744 aa12.33□□□□□ -0.44
PTPN2-210ENST00000591115 ANXA1P04083 346 aa12.33□□□□□ -0.44
PTPN2-210ENST00000591115 PROSER3Q2NL68 480 aa12.33□□□□□ -0.44
PTPN2-210ENST00000591115 VSIG10Q8N0Z9 540 aa12.33□□□□□ -0.44
PTPN2-210ENST00000591115 LINC00116Q8NCU8 138 aa12.33□□□□□ -0.44
PTPN2-210ENST00000591115 LINS1Q8NG48 757 aa12.33□□□□□ -0.44
PTPN2-210ENST00000591115 SSH3Q8TE77 659 aa12.33□□□□□ -0.44
PTPN2-210ENST00000591115 MAP3K2Q9Y2U5 619 aa12.33□□□□□ -0.44
PTPN2-210ENST00000591115 ARFGEF2Q9Y6D5 1785 aa12.33□□□□□ -0.44
PTPN2-210ENST00000591115 LRRC4BQ9NT99 713 aa12.32□□□□□ -0.44
PTPN2-210ENST00000591115 CYP19A1P11511 503 aaPredicted RBP12.31□□□□□ -0.44
PTPN2-210ENST00000591115 MTX1Q13505 466 aa12.31□□□□□ -0.44
PTPN2-210ENST00000591115 POLA2Q14181 598 aa12.31□□□□□ -0.44
PTPN2-210ENST00000591115 ILDR2Q71H61 639 aa12.31□□□□□ -0.44
PTPN2-210ENST00000591115 OSBPL3Q9H4L5 887 aa12.31□□□□□ -0.44
PTPN2-210ENST00000591115 UTYO14607 1347 aa12.31□□□□□ -0.44
PTPN2-210ENST00000591115 BCORQ6W2J9 1755 aa12.3□□□□□ -0.44
PTPN2-210ENST00000591115 PNMA6EA0A0J9YXQ4 647 aa12.3□□□□□ -0.44
PTPN2-210ENST00000591115 RAB11FIP3O75154 756 aa12.3□□□□□ -0.44
PTPN2-210ENST00000591115 A1BGP04217 495 aa12.3□□□□□ -0.44
PTPN2-210ENST00000591115 TXNRD1Q16881 649 aa12.3□□□□□ -0.44
PTPN2-210ENST00000591115 TTC22Q5TAA0 569 aa12.3□□□□□ -0.44
PTPN2-210ENST00000591115 LRRCC1Q9C099 1032 aa12.3□□□□□ -0.44
PTPN2-210ENST00000591115 SCN7AQ01118 1682 aa12.3□□□□□ -0.44
PTPN2-210ENST00000591115 NBPF26B4DH59 902 aa12.29□□□□□ -0.44
PTPN2-210ENST00000591115 MYL6BP14649 208 aa12.29□□□□□ -0.44
PTPN2-210ENST00000591115 EN1Q05925 392 aaPredicted RBP12.29□□□□□ -0.44
PTPN2-210ENST00000591115 HSP90AB4PQ58FF6 505 aa12.29□□□□□ -0.44
PTPN2-210ENST00000591115 NBPF14Q5TI25 921 aa12.29□□□□□ -0.44
PTPN2-210ENST00000591115 NBPF10Q6P3W6 841 aaKnown RBP12.29□□□□□ -0.44
PTPN2-210ENST00000591115 LRP10Q7Z4F1 713 aa12.29□□□□□ -0.44
PTPN2-210ENST00000591115 DEFB132Q7Z7B7 95 aa12.29□□□□□ -0.44
PTPN2-210ENST00000591115 PROM2Q8N271 834 aa12.29□□□□□ -0.44
PTPN2-210ENST00000591115 NBPF15Q8N660 670 aa12.29□□□□□ -0.44
PTPN2-210ENST00000591115 DAXXQ9UER7 740 aaPredicted RBP12.29□□□□□ -0.44
PTPN2-210ENST00000591115 ZBTB1Q9Y2K1 713 aa12.29□□□□□ -0.44
PTPN2-210ENST00000591115 PLSCR1O15162 318 aa12.29□□□□□ -0.44
PTPN2-210ENST00000591115 CDC45O75419 566 aa12.29□□□□□ -0.44
PTPN2-210ENST00000591115 STARD3NLO95772 234 aa12.29□□□□□ -0.44
PTPN2-210ENST00000591115 NBPF7P0C2Y1 421 aaPredicted RBP12.29□□□□□ -0.44
PTPN2-210ENST00000591115 CRKLP46109 303 aaKnown RBP12.29□□□□□ -0.44
PTPN2-210ENST00000591115 NEXNQ0ZGT2 675 aa12.29□□□□□ -0.44
PTPN2-210ENST00000591115 TEX13AQ9BXU3 409 aaPredicted RBP12.29□□□□□ -0.44
PTPN2-210ENST00000591115 ANKRD36CQ5JPF3 1778 aa12.28□□□□□ -0.44
PTPN2-210ENST00000591115 SF3B2Q13435 895 aaKnown RBP12.28□□□□□ -0.44
PTPN2-210ENST00000591115 EZH2Q15910 746 aaKnown RBP12.28□□□□□ -0.44
PTPN2-210ENST00000591115 PPP1R42Q7Z4L9 355 aa12.28□□□□□ -0.44
PTPN2-210ENST00000591115 RIC3Q7Z5B4 369 aa12.28□□□□□ -0.44
PTPN2-210ENST00000591115 XAGE3Q8WTP9 111 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms