RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 TBC1D2BQ9UPU7 963 aa14.58□□□□□ -0.08
GFAP-217ENST00000590922 ZNF330Q9Y3S2 320 aaPredicted RBP14.58□□□□□ -0.08
GFAP-217ENST00000590922 IQCA1LA6NCM1 817 aa14.57□□□□□ -0.08
GFAP-217ENST00000590922 NPHP1O15259 732 aa14.57□□□□□ -0.08
GFAP-217ENST00000590922 SOGA3Q5TF21 947 aa14.57□□□□□ -0.08
GFAP-217ENST00000590922 STYK1Q6J9G0 422 aa14.57□□□□□ -0.08
GFAP-217ENST00000590922 CNBD1Q8NA66 436 aa14.57□□□□□ -0.08
GFAP-217ENST00000590922 GAS2L2Q8NHY3 880 aa14.57□□□□□ -0.08
GFAP-217ENST00000590922 ZNF496Q96IT1 587 aaPredicted RBP14.57□□□□□ -0.08
GFAP-217ENST00000590922 SETDB2Q96T68 719 aa14.57□□□□□ -0.08
GFAP-217ENST00000590922 CNTNAP1P78357 1384 aa14.57□□□□□ -0.08
GFAP-217ENST00000590922 ARFGEF2Q9Y6D5 1785 aa14.57□□□□□ -0.08
GFAP-217ENST00000590922 SCN4AP35499 1836 aa14.57□□□□□ -0.08
GFAP-217ENST00000590922 FOXN1O15353 648 aa14.56□□□□□ -0.08
GFAP-217ENST00000590922 IL6STP40189 918 aaPredicted RBP14.56□□□□□ -0.08
GFAP-217ENST00000590922 PRPF40BQ6NWY9 871 aaKnown RBP14.56□□□□□ -0.08
GFAP-217ENST00000590922 ZNF790Q6PG37 636 aa14.56□□□□□ -0.08
GFAP-217ENST00000590922 NPM2Q86SE8 214 aaKnown RBP14.56□□□□□ -0.08
GFAP-217ENST00000590922 HEG1Q9ULI3 1381 aa14.56□□□□□ -0.08
GFAP-217ENST00000590922 GNAT3A8MTJ3 354 aa14.55□□□□□ -0.08
GFAP-217ENST00000590922 SRGNP10124 158 aa14.55□□□□□ -0.08
GFAP-217ENST00000590922 ST5P78524 1137 aa14.55□□□□□ -0.08
GFAP-217ENST00000590922 TEFQ10587 303 aa14.55□□□□□ -0.08
GFAP-217ENST00000590922 LDHDQ86WU2 507 aa14.55□□□□□ -0.08
GFAP-217ENST00000590922 IL17REQ8NFR9 667 aa14.55□□□□□ -0.08
GFAP-217ENST00000590922 MASTLQ96GX5 879 aa14.55□□□□□ -0.08
GFAP-217ENST00000590922 L3MBTL3Q96JM7 780 aaPredicted RBP14.55□□□□□ -0.08
GFAP-217ENST00000590922 PRDM10Q9NQV6 1147 aa14.55□□□□□ -0.08
GFAP-217ENST00000590922 PASKQ96RG2 1323 aa14.55□□□□□ -0.08
GFAP-217ENST00000590922 SIPA1L3O60292 1781 aaPredicted RBP14.55□□□□□ -0.08
GFAP-217ENST00000590922 CAMTA2O94983 1202 aa14.54□□□□□ -0.08
GFAP-217ENST00000590922 BCORQ6W2J9 1755 aa14.53□□□□□ -0.08
GFAP-217ENST00000590922 AIDAQ96BJ3 306 aa14.53□□□□□ -0.08
GFAP-217ENST00000590922 TAF1DQ9H5J8 278 aaPredicted RBP14.53□□□□□ -0.08
GFAP-217ENST00000590922 TMEM88BA6NKF7 163 aa14.52□□□□□ -0.09
GFAP-217ENST00000590922 A1BGP04217 495 aa14.52□□□□□ -0.09
GFAP-217ENST00000590922 CTCFP49711 727 aaPredicted RBP14.52□□□□□ -0.09
GFAP-217ENST00000590922 FMNL2Q96PY5 1086 aa14.52□□□□□ -0.09
GFAP-217ENST00000590922 PLEKHF1Q96S99 279 aa14.52□□□□□ -0.09
GFAP-217ENST00000590922 ITGBL1O95965 494 aaPredicted RBP14.51□□□□□ -0.09
GFAP-217ENST00000590922 VEGFBP49765 207 aa14.51□□□□□ -0.09
GFAP-217ENST00000590922 CCDC93Q567U6 631 aa14.51□□□□□ -0.09
GFAP-217ENST00000590922 DZIP3Q86Y13 1208 aaKnown RBP14.51□□□□□ -0.09
GFAP-217ENST00000590922 C7orf43Q8WVR3 580 aa14.51□□□□□ -0.09
GFAP-217ENST00000590922 DCTN1Q14203 1278 aa14.5□□□□□ -0.09
GFAP-217ENST00000590922 EAPPQ56P03 285 aaPredicted RBP14.5□□□□□ -0.09
GFAP-217ENST00000590922 MCM10Q7L590 875 aa14.5□□□□□ -0.09
GFAP-217ENST00000590922 NBPF5PQ86XG9 351 aaPredicted RBP14.5□□□□□ -0.09
GFAP-217ENST00000590922 CEMIPQ8WUJ3 1361 aa14.49□□□□□ -0.09
GFAP-217ENST00000590922 NEFMP07197 916 aa14.49□□□□□ -0.09
GFAP-217ENST00000590922 NPR1P16066 1061 aa14.49□□□□□ -0.09
GFAP-217ENST00000590922 FKBP4Q02790 459 aaKnown RBP eCLIP14.49□□□□□ -0.09
GFAP-217ENST00000590922 CLEC4GQ6UXB4 293 aa14.49□□□□□ -0.09
GFAP-217ENST00000590922 RTF1Q92541 710 aaKnown RBP14.49□□□□□ -0.09
GFAP-217ENST00000590922 WBP1LQ9NX94 342 aa14.49□□□□□ -0.09
GFAP-217ENST00000590922 HACL1Q9UJ83 578 aa14.49□□□□□ -0.09
GFAP-217ENST00000590922 ZNF541Q9H0D2 1346 aa14.48□□□□□ -0.09
GFAP-217ENST00000590922 ADAMTSL1Q8N6G6 1762 aa14.48□□□□□ -0.09
GFAP-217ENST00000590922 ZNF277Q9NRM2 450 aaPredicted RBP14.48□□□□□ -0.09
GFAP-217ENST00000590922 CLEC11AQ9Y240 323 aa14.48□□□□□ -0.09
GFAP-217ENST00000590922 ZNF652Q9Y2D9 606 aa14.48□□□□□ -0.09
GFAP-217ENST00000590922 MAPK8IP3Q9UPT6 1336 aa14.47□□□□□ -0.09
GFAP-217ENST00000590922 KLRG2A4D1S0 409 aaPredicted RBP14.47□□□□□ -0.09
GFAP-217ENST00000590922 BTBD11A6QL63 1104 aa14.47□□□□□ -0.09
GFAP-217ENST00000590922 EPHX2P34913 555 aa14.47□□□□□ -0.09
GFAP-217ENST00000590922 LBX1P52954 281 aa14.47□□□□□ -0.09
GFAP-217ENST00000590922 WDR43Q15061 677 aaKnown RBP eCLIP14.47□□□□□ -0.09
GFAP-217ENST00000590922 NFE2L2Q16236 605 aa14.47□□□□□ -0.09
GFAP-217ENST00000590922 CCDC184Q52MB2 194 aa14.47□□□□□ -0.09
GFAP-217ENST00000590922 PNMA8AQ86V59 439 aaPredicted RBP14.47□□□□□ -0.09
GFAP-217ENST00000590922 CCDC146Q8IYE0 955 aa14.47□□□□□ -0.09
GFAP-217ENST00000590922 RTKN2Q8IZC4 609 aa14.47□□□□□ -0.09
GFAP-217ENST00000590922 PNNQ9H307 717 aaKnown RBP14.47□□□□□ -0.09
GFAP-217ENST00000590922 ADAMTS8Q9UP79 889 aa14.47□□□□□ -0.09
GFAP-217ENST00000590922 DLG5Q8TDM6 1919 aa14.47□□□□□ -0.09
GFAP-217ENST00000590922 RASSF10A6NK89 507 aa14.46□□□□□ -0.09
GFAP-217ENST00000590922 KCNQ3O43525 872 aa14.46□□□□□ -0.09
GFAP-217ENST00000590922 HTATSF1O43719 755 aaKnown RBP14.46□□□□□ -0.09
GFAP-217ENST00000590922 PIP4K2AP48426 406 aaPredicted RBP14.46□□□□□ -0.09
GFAP-217ENST00000590922 DEFB115Q30KQ5 88 aa14.46□□□□□ -0.09
GFAP-217ENST00000590922 TPTE2Q6XPS3 522 aa14.46□□□□□ -0.09
GFAP-217ENST00000590922 USP16Q9Y5T5 823 aa14.46□□□□□ -0.09
GFAP-217ENST00000590922 RNF123Q5XPI4 1314 aa14.45□□□□□ -0.1
GFAP-217ENST00000590922 FZD9O00144 591 aa14.45□□□□□ -0.1
GFAP-217ENST00000590922 ANP32CO43423 234 aa14.45□□□□□ -0.1
GFAP-217ENST00000590922 MAP1SQ66K74 1059 aaPredicted RBP14.45□□□□□ -0.1
GFAP-217ENST00000590922 OLFM4Q6UX06 510 aa14.45□□□□□ -0.1
GFAP-217ENST00000590922 CNTROBQ8N137 903 aa14.45□□□□□ -0.1
GFAP-217ENST00000590922 RGL2O15211 777 aa14.44□□□□□ -0.1
GFAP-217ENST00000590922 ALDH1B1P30837 517 aa14.44□□□□□ -0.1
GFAP-217ENST00000590922 IARSP41252 1262 aaKnown RBP14.44□□□□□ -0.1
GFAP-217ENST00000590922 MAP2K1Q02750 393 aaPredicted RBP14.44□□□□□ -0.1
GFAP-217ENST00000590922 GPC2Q8N158 579 aa14.44□□□□□ -0.1
GFAP-217ENST00000590922 THUMPD2Q9BTF0 503 aaKnown RBP14.44□□□□□ -0.1
GFAP-217ENST00000590922 NIP7Q9Y221 180 aaKnown RBP eCLIP14.44□□□□□ -0.1
GFAP-217ENST00000590922 SNRPA1P09661 255 aaKnown RBP14.43□□□□□ -0.1
GFAP-217ENST00000590922 HSPA8P11142 646 aaKnown RBP14.43□□□□□ -0.1
GFAP-217ENST00000590922 SYNE4Q8N205 404 aa14.43□□□□□ -0.1
GFAP-217ENST00000590922 ABHD8Q96I13 439 aa14.43□□□□□ -0.1
GFAP-217ENST00000590922 ABT1Q9ULW3 272 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms