RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 A0A087WZG4 1122 aa16.2■□□□□ 0.18
PTBP1-216ENST00000590887 NBPF26B4DH59 902 aa16.2■□□□□ 0.18
PTBP1-216ENST00000590887 NBPF14Q5TI25 921 aa16.2■□□□□ 0.18
PTBP1-216ENST00000590887 NBPF10Q6P3W6 841 aaKnown RBP16.2■□□□□ 0.18
PTBP1-216ENST00000590887 SMC5Q8IY18 1101 aa16.2■□□□□ 0.18
PTBP1-216ENST00000590887 NBPF15Q8N660 670 aa16.2■□□□□ 0.18
PTBP1-216ENST00000590887 USP44Q9H0E7 712 aa16.2■□□□□ 0.18
PTBP1-216ENST00000590887 CICQ96RK0 1608 aaPredicted RBP16.19■□□□□ 0.18
PTBP1-216ENST00000590887 ATP8B2P98198 1209 aa16.19■□□□□ 0.18
PTBP1-216ENST00000590887 CEP85Q6P2H3 762 aa16.19■□□□□ 0.18
PTBP1-216ENST00000590887 LRP10Q7Z4F1 713 aa16.19■□□□□ 0.18
PTBP1-216ENST00000590887 MYD88Q99836 296 aa16.19■□□□□ 0.18
PTBP1-216ENST00000590887 BCL11BQ9C0K0 894 aaPredicted RBP16.19■□□□□ 0.18
PTBP1-216ENST00000590887 C1orf115Q9H7X2 142 aa16.19■□□□□ 0.18
PTBP1-216ENST00000590887 CCDC87Q9NVE4 849 aa16.19■□□□□ 0.18
PTBP1-216ENST00000590887 KCNQ2O43526 872 aa16.18■□□□□ 0.18
PTBP1-216ENST00000590887 NEURL1BA8MQ27 555 aa16.17■□□□□ 0.18
PTBP1-216ENST00000590887 ERVV-1B6SEH8 477 aa16.17■□□□□ 0.18
PTBP1-216ENST00000590887 GRM8O00222 908 aa16.17■□□□□ 0.18
PTBP1-216ENST00000590887 HSP90AB4PQ58FF6 505 aa16.17■□□□□ 0.18
PTBP1-216ENST00000590887 CCDC191Q8NCU4 936 aa16.17■□□□□ 0.18
PTBP1-216ENST00000590887 ARXQ96QS3 562 aa16.17■□□□□ 0.18
PTBP1-216ENST00000590887 DCTPP1Q9H773 170 aa16.17■□□□□ 0.18
PTBP1-216ENST00000590887 ZNF330Q9Y3S2 320 aaPredicted RBP16.17■□□□□ 0.18
PTBP1-216ENST00000590887 UTYO14607 1347 aa16.17■□□□□ 0.18
PTBP1-216ENST00000590887 ARFGEF2Q9Y6D5 1785 aa16.16■□□□□ 0.18
PTBP1-216ENST00000590887 GCKRQ14397 625 aa16.16■□□□□ 0.18
PTBP1-216ENST00000590887 CWC25Q9NXE8 425 aaPredicted RBP16.16■□□□□ 0.18
PTBP1-216ENST00000590887 TJP1Q07157 1748 aa16.16■□□□□ 0.18
PTBP1-216ENST00000590887 MAP3K15Q6ZN16 1313 aa16.16■□□□□ 0.18
PTBP1-216ENST00000590887 SBF2Q86WG5 1849 aa16.15■□□□□ 0.18
PTBP1-216ENST00000590887 TRIM28Q13263 835 aaKnown RBP16.15■□□□□ 0.18
PTBP1-216ENST00000590887 TCIRG1Q13488 830 aa16.15■□□□□ 0.18
PTBP1-216ENST00000590887 RC3H1Q5TC82 1133 aaKnown RBP16.15■□□□□ 0.18
PTBP1-216ENST00000590887 PDZRN3Q9UPQ7 1066 aa16.15■□□□□ 0.18
PTBP1-216ENST00000590887 LRRFIP2Q9Y608 721 aaKnown RBP16.15■□□□□ 0.18
PTBP1-216ENST00000590887 BTAF1O14981 1849 aa16.15■□□□□ 0.18
PTBP1-216ENST00000590887 AFDNP55196 1824 aaKnown RBP16.15■□□□□ 0.18
PTBP1-216ENST00000590887 RGL2O15211 777 aa16.14■□□□□ 0.17
PTBP1-216ENST00000590887 HSP90B1P14625 803 aaKnown RBP16.14■□□□□ 0.17
PTBP1-216ENST00000590887 CRKLP46109 303 aaKnown RBP16.14■□□□□ 0.17
PTBP1-216ENST00000590887 PIP4K2AP48426 406 aaPredicted RBP16.14■□□□□ 0.17
PTBP1-216ENST00000590887 SLC4A9Q96Q91 983 aa16.14■□□□□ 0.17
PTBP1-216ENST00000590887 ZNF652Q9Y2D9 606 aa16.14■□□□□ 0.17
PTBP1-216ENST00000590887 CNTNAP4Q9C0A0 1308 aa16.14■□□□□ 0.17
PTBP1-216ENST00000590887 RAB11FIP3O75154 756 aa16.13■□□□□ 0.17
PTBP1-216ENST00000590887 IGKV5-2P06315 115 aa16.13■□□□□ 0.17
PTBP1-216ENST00000590887 EIF5P55010 431 aaKnown RBP16.13■□□□□ 0.17
PTBP1-216ENST00000590887 NUCB1Q02818 461 aa16.13■□□□□ 0.17
PTBP1-216ENST00000590887 CWF19L2Q2TBE0 894 aaKnown RBP16.13■□□□□ 0.17
PTBP1-216ENST00000590887 ANKRD45Q5TZF3 282 aa16.13■□□□□ 0.17
PTBP1-216ENST00000590887 GIGYF2Q6Y7W6 1299 aaKnown RBP16.13■□□□□ 0.17
PTBP1-216ENST00000590887 TTLL7Q6ZT98 887 aa16.13■□□□□ 0.17
PTBP1-216ENST00000590887 DZIP3Q86Y13 1208 aaKnown RBP16.13■□□□□ 0.17
PTBP1-216ENST00000590887 ZBTB3Q9H5J0 574 aa16.13■□□□□ 0.17
PTBP1-216ENST00000590887 CCNL1Q9UK58 526 aaPredicted RBP16.13■□□□□ 0.17
PTBP1-216ENST00000590887 ZBTB1Q9Y2K1 713 aa16.13■□□□□ 0.17
PTBP1-216ENST00000590887 NBPF7P0C2Y1 421 aaPredicted RBP16.12■□□□□ 0.17
PTBP1-216ENST00000590887 SLC27A3Q5K4L6 730 aa16.12■□□□□ 0.17
PTBP1-216ENST00000590887 CHD1LQ86WJ1 897 aa16.12■□□□□ 0.17
PTBP1-216ENST00000590887 SIRT2Q8IXJ6 389 aa16.12■□□□□ 0.17
PTBP1-216ENST00000590887 COL15A1P39059 1388 aa16.12■□□□□ 0.17
PTBP1-216ENST00000590887 NUP188Q5SRE5 1749 aa16.11■□□□□ 0.17
PTBP1-216ENST00000590887 SRGAP3O43295 1099 aa16.11■□□□□ 0.17
PTBP1-216ENST00000590887 RGS3P49796 1198 aa16.11■□□□□ 0.17
PTBP1-216ENST00000590887 MTX1Q13505 466 aa16.11■□□□□ 0.17
PTBP1-216ENST00000590887 INTS5Q6P9B9 1019 aaKnown RBP16.11■□□□□ 0.17
PTBP1-216ENST00000590887 SSH3Q8TE77 659 aa16.11■□□□□ 0.17
PTBP1-216ENST00000590887 ISCA1Q9BUE6 129 aa16.11■□□□□ 0.17
PTBP1-216ENST00000590887 ATP5J2-PTCD1G3V325 749 aa16.1■□□□□ 0.17
PTBP1-216ENST00000590887 ITPK1Q13572 414 aa16.1■□□□□ 0.17
PTBP1-216ENST00000590887 PPP1R42Q7Z4L9 355 aa16.1■□□□□ 0.17
PTBP1-216ENST00000590887 ERC1Q8IUD2 1116 aa16.1■□□□□ 0.17
PTBP1-216ENST00000590887 RREB1Q92766 1687 aa16.1■□□□□ 0.17
PTBP1-216ENST00000590887 LY75O60449 1722 aa16.09■□□□□ 0.17
PTBP1-216ENST00000590887 COL5A3P25940 1745 aaPredicted RBP16.09■□□□□ 0.17
PTBP1-216ENST00000590887 H7C1W4 665 aa16.09■□□□□ 0.17
PTBP1-216ENST00000590887 EIF5BO60841 1220 aaKnown RBP16.09■□□□□ 0.17
PTBP1-216ENST00000590887 PARP10Q53GL7 1025 aa16.09■□□□□ 0.17
PTBP1-216ENST00000590887 CLEC4GQ6UXB4 293 aa16.09■□□□□ 0.17
PTBP1-216ENST00000590887 RPS6KA4O75676 772 aa16.08■□□□□ 0.16
PTBP1-216ENST00000590887 POLA2Q14181 598 aa16.08■□□□□ 0.16
PTBP1-216ENST00000590887 FAM182BQ5T319 152 aa16.08■□□□□ 0.16
PTBP1-216ENST00000590887 RTCBQ9Y3I0 505 aaKnown RBP16.08■□□□□ 0.16
PTBP1-216ENST00000590887 SURF6O75683 361 aaKnown RBP16.07■□□□□ 0.16
PTBP1-216ENST00000590887 PCCAP05165 728 aaPredicted RBP16.07■□□□□ 0.16
PTBP1-216ENST00000590887 LRRCC1Q9C099 1032 aa16.07■□□□□ 0.16
PTBP1-216ENST00000590887 SRCAPQ6ZRS2 3230 aa16.06■□□□□ 0.16
PTBP1-216ENST00000590887 NUP98P52948 1817 aa16.06■□□□□ 0.16
PTBP1-216ENST00000590887 TRIM37O94972 964 aa16.06■□□□□ 0.16
PTBP1-216ENST00000590887 ADRA2BP18089 450 aa16.06■□□□□ 0.16
PTBP1-216ENST00000590887 G3BP1Q13283 466 aaKnown RBP eCLIP16.06■□□□□ 0.162e-10■□□□□ 11.2
PTBP1-216ENST00000590887 OS9Q13438 667 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-216ENST00000590887 UBE3BQ7Z3V4 1068 aa16.06■□□□□ 0.16
PTBP1-216ENST00000590887 ZBTB38Q8NAP3 1195 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-216ENST00000590887 LINC00116Q8NCU8 138 aa16.06■□□□□ 0.16
PTBP1-216ENST00000590887 SUCLG2Q96I99 432 aa16.06■□□□□ 0.16
PTBP1-216ENST00000590887 AK7Q96M32 723 aa16.06■□□□□ 0.16
PTBP1-216ENST00000590887 LNPKQ9C0E8 428 aa16.06■□□□□ 0.16
PTBP1-216ENST00000590887 TBC1D2BQ9UPU7 963 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms