RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 TAF7Q15545 349 aaPredicted RBP13.02□□□□□ -0.32
LINC01140-210ENST00000590653 CDC37L1Q7L3B6 337 aa13.02□□□□□ -0.32
LINC01140-210ENST00000590653 USHBP1Q8N6Y0 703 aa13.02□□□□□ -0.32
LINC01140-210ENST00000590653 EYA1Q99502 592 aa13.02□□□□□ -0.32
LINC01140-210ENST00000590653 FUCA2Q9BTY2 467 aa13.02□□□□□ -0.32
LINC01140-210ENST00000590653 CRB1P82279 1406 aa13.02□□□□□ -0.33
LINC01140-210ENST00000590653 TNNT1P13805 278 aa13.01□□□□□ -0.33
LINC01140-210ENST00000590653 TPD52L1Q16890 204 aaPredicted RBP13.01□□□□□ -0.33
LINC01140-210ENST00000590653 C14orf37Q86TY3 774 aa13.01□□□□□ -0.33
LINC01140-210ENST00000590653 BICD2Q8TD16 824 aa13.01□□□□□ -0.33
LINC01140-210ENST00000590653 PA2G4Q9UQ80 394 aaKnown RBP13.01□□□□□ -0.33
LINC01140-210ENST00000590653 PPFIA3O75145 1194 aa13.01□□□□□ -0.33
LINC01140-210ENST00000590653 KRT85P78386 507 aa13.01□□□□□ -0.33
LINC01140-210ENST00000590653 FAM200AQ8TCP9 573 aa13.01□□□□□ -0.33
LINC01140-210ENST00000590653 RAB11FIP3O75154 756 aa13.01□□□□□ -0.33
LINC01140-210ENST00000590653 KIF1BPQ96EK5 621 aa13.01□□□□□ -0.33
LINC01140-210ENST00000590653 A0A087WWV3 80 aa13□□□□□ -0.33
LINC01140-210ENST00000590653 SSH3Q8TE77 659 aa13□□□□□ -0.33
LINC01140-210ENST00000590653 DDX11Q96FC9 970 aa13□□□□□ -0.33
LINC01140-210ENST00000590653 DNAJC25Q9H1X3 360 aa13□□□□□ -0.33
LINC01140-210ENST00000590653 CBX8Q9HC52 389 aa13□□□□□ -0.33
LINC01140-210ENST00000590653 MRVI1Q9Y6F6 885 aa13□□□□□ -0.33
LINC01140-210ENST00000590653 TPCN1Q9ULQ1 816 aa13□□□□□ -0.33
LINC01140-210ENST00000590653 SSH2Q76I76 1423 aa13□□□□□ -0.33
LINC01140-210ENST00000590653 PI4KAP2A4QPH2 592 aa13□□□□□ -0.33
LINC01140-210ENST00000590653 ZKSCAN1P17029 563 aaPredicted RBP13□□□□□ -0.33
LINC01140-210ENST00000590653 UTP14CQ5TAP6 766 aaKnown RBP13□□□□□ -0.33
LINC01140-210ENST00000590653 PI4KAP1Q8N8J0 262 aa13□□□□□ -0.33
LINC01140-210ENST00000590653 SPATA32Q96LK8 384 aa13□□□□□ -0.33
LINC01140-210ENST00000590653 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
LINC01140-210ENST00000590653 FAM227BQ96M60 508 aa12.99□□□□□ -0.33
LINC01140-210ENST00000590653 GNAT3A8MTJ3 354 aa12.99□□□□□ -0.33
LINC01140-210ENST00000590653 IFIT2P09913 472 aaKnown RBP12.99□□□□□ -0.33
LINC01140-210ENST00000590653 NCBP1Q09161 790 aaKnown RBP12.98□□□□□ -0.33
LINC01140-210ENST00000590653 ST3GAL1Q11201 340 aa12.98□□□□□ -0.33
LINC01140-210ENST00000590653 ARID5BQ14865 1188 aa12.98□□□□□ -0.33
LINC01140-210ENST00000590653 CLASRPQ8N2M8 674 aaKnown RBP12.98□□□□□ -0.33
LINC01140-210ENST00000590653 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
LINC01140-210ENST00000590653 GTPBP4Q9BZE4 634 aaKnown RBP12.98□□□□□ -0.33
LINC01140-210ENST00000590653 TRMT1Q9NXH9 659 aaKnown RBP12.98□□□□□ -0.33
LINC01140-210ENST00000590653 CCDC112Q8NEF3 446 aa12.98□□□□□ -0.33
LINC01140-210ENST00000590653 RUFY2Q8WXA3 655 aa12.98□□□□□ -0.33
LINC01140-210ENST00000590653 CCDC8Q9H0W5 538 aaPredicted RBP12.98□□□□□ -0.33
LINC01140-210ENST00000590653 RBM8AQ9Y5S9 174 aaKnown RBP12.98□□□□□ -0.33
LINC01140-210ENST00000590653 TPM3P06753 285 aa12.98□□□□□ -0.33
LINC01140-210ENST00000590653 ZNF165P49910 485 aa12.98□□□□□ -0.33
LINC01140-210ENST00000590653 LARP1Q6PKG0 1096 aaKnown RBP12.98□□□□□ -0.33
LINC01140-210ENST00000590653 FILIP1Q7Z7B0 1213 aa12.98□□□□□ -0.33
LINC01140-210ENST00000590653 CLIP2Q9UDT6 1046 aa12.98□□□□□ -0.33
LINC01140-210ENST00000590653 AACSQ86V21 672 aa12.97□□□□□ -0.33
LINC01140-210ENST00000590653 SIL1Q9H173 461 aa12.97□□□□□ -0.33
LINC01140-210ENST00000590653 CGNQ9P2M7 1197 aaKnown RBP12.97□□□□□ -0.33
LINC01140-210ENST00000590653 CCDC9Q9Y3X0 531 aaKnown RBP12.97□□□□□ -0.33
LINC01140-210ENST00000590653 TAF6LQ9Y6J9 622 aa12.97□□□□□ -0.33
LINC01140-210ENST00000590653 GLRX3O76003 335 aaKnown RBP12.97□□□□□ -0.33
LINC01140-210ENST00000590653 CHPF2Q9P2E5 772 aa12.97□□□□□ -0.33
LINC01140-210ENST00000590653 TAOK2Q9UL54 1235 aa12.97□□□□□ -0.33
LINC01140-210ENST00000590653 NR1I2O75469 434 aa12.96□□□□□ -0.33
LINC01140-210ENST00000590653 VPS53Q5VIR6 699 aa12.96□□□□□ -0.33
LINC01140-210ENST00000590653 ZSCAN25Q6NSZ9 544 aa12.96□□□□□ -0.33
LINC01140-210ENST00000590653 CACTINQ8WUQ7 758 aaKnown RBP12.96□□□□□ -0.33
LINC01140-210ENST00000590653 SYTL4Q96C24 671 aaPredicted RBP12.96□□□□□ -0.33
LINC01140-210ENST00000590653 ESF1Q9H501 851 aaKnown RBP12.96□□□□□ -0.33
LINC01140-210ENST00000590653 C9orf78Q9NZ63 289 aaPredicted RBP12.96□□□□□ -0.33
LINC01140-210ENST00000590653 TMEM131LA2VDJ0 1609 aa12.96□□□□□ -0.33
LINC01140-210ENST00000590653 NLRP6P59044 892 aa12.96□□□□□ -0.33
LINC01140-210ENST00000590653 ERCC4Q92889 916 aaPredicted RBP12.96□□□□□ -0.33
LINC01140-210ENST00000590653 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.33
LINC01140-210ENST00000590653 SLC26A8Q96RN1 970 aa12.96□□□□□ -0.33
LINC01140-210ENST00000590653 BOLA2Q9H3K6 86 aa12.96□□□□□ -0.33
LINC01140-210ENST00000590653 NAP1L2Q9ULW6 460 aaPredicted RBP12.96□□□□□ -0.33
LINC01140-210ENST00000590653 CREB3L3Q68CJ9 461 aa12.96□□□□□ -0.34
LINC01140-210ENST00000590653 ANKRD7Q92527 254 aa12.96□□□□□ -0.34
LINC01140-210ENST00000590653 KCNQ3O43525 872 aa12.95□□□□□ -0.34
LINC01140-210ENST00000590653 ZNF75DP51815 510 aa12.95□□□□□ -0.34
LINC01140-210ENST00000590653 CCDC144BQ3MJ40 725 aa12.95□□□□□ -0.34
LINC01140-210ENST00000590653 CCDC144CPQ8IYA2 1237 aa12.95□□□□□ -0.34
LINC01140-210ENST00000590653 SH2B1Q9NRF2 756 aaPredicted RBP12.95□□□□□ -0.34
LINC01140-210ENST00000590653 ZSWIM6Q9HCJ5 1215 aa12.95□□□□□ -0.34
LINC01140-210ENST00000590653 CLTCQ00610 1675 aaKnown RBP12.95□□□□□ -0.34
LINC01140-210ENST00000590653 GOLGA6L19H0YKK7 550 aa12.95□□□□□ -0.34
LINC01140-210ENST00000590653 JAK2O60674 1132 aa12.95□□□□□ -0.34
LINC01140-210ENST00000590653 HSP90B1P14625 803 aaKnown RBP12.95□□□□□ -0.34
LINC01140-210ENST00000590653 NMIQ13287 307 aaPredicted RBP12.95□□□□□ -0.34
LINC01140-210ENST00000590653 BLOC1S2Q6QNY1 142 aa12.95□□□□□ -0.34
LINC01140-210ENST00000590653 LRRC2Q9BYS8 371 aa12.95□□□□□ -0.34
LINC01140-210ENST00000590653 ECHDC1Q9NTX5 307 aa12.95□□□□□ -0.34
LINC01140-210ENST00000590653 USP27XA6NNY8 438 aa12.94□□□□□ -0.34
LINC01140-210ENST00000590653 FGD1P98174 961 aa12.94□□□□□ -0.34
LINC01140-210ENST00000590653 DNAAF4Q8WXU2 420 aa12.94□□□□□ -0.34
LINC01140-210ENST00000590653 AOX1Q06278 1338 aa12.94□□□□□ -0.34
LINC01140-210ENST00000590653 H3BQV1 296 aa12.94□□□□□ -0.34
LINC01140-210ENST00000590653 IFFO2Q5TF58 517 aa12.94□□□□□ -0.34
LINC01140-210ENST00000590653 EDC3Q96F86 508 aaKnown RBP12.94□□□□□ -0.34
LINC01140-210ENST00000590653 FSD1Q9BTV5 496 aa12.94□□□□□ -0.34
LINC01140-210ENST00000590653 USP16Q9Y5T5 823 aa12.94□□□□□ -0.34
LINC01140-210ENST00000590653 CTIFO43310 598 aaKnown RBP12.93□□□□□ -0.34
LINC01140-210ENST00000590653 LEO1Q8WVC0 666 aaPredicted RBP12.93□□□□□ -0.34
LINC01140-210ENST00000590653 NDUFB9Q9Y6M9 179 aa12.93□□□□□ -0.34
LINC01140-210ENST00000590653 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms