RNA–Protein interactions for RNA: ENST00000590118.5

CROCCP3-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 4 BASIC

Gene CROCCP3, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-204ENST00000590118 SLC34A2O95436 690 aa19.02■□□□□ 0.64
CROCCP3-204ENST00000590118 HSPA5P11021 654 aaKnown RBP19.02■□□□□ 0.64
CROCCP3-204ENST00000590118 LBX1P52954 281 aa19.02■□□□□ 0.64
CROCCP3-204ENST00000590118 EIF4G2P78344 907 aaKnown RBP eCLIP19.02■□□□□ 0.64
CROCCP3-204ENST00000590118 CAMTA2O94983 1202 aa19.01■□□□□ 0.63
CROCCP3-204ENST00000590118 ST5P78524 1137 aa19.01■□□□□ 0.63
CROCCP3-204ENST00000590118 ZNF790Q6PG37 636 aa19.01■□□□□ 0.63
CROCCP3-204ENST00000590118 C7orf43Q8WVR3 580 aa19.01■□□□□ 0.63
CROCCP3-204ENST00000590118 EAPPQ56P03 285 aaPredicted RBP19■□□□□ 0.63
CROCCP3-204ENST00000590118 A1BGP04217 495 aa18.99■□□□□ 0.63
CROCCP3-204ENST00000590118 CCDC93Q567U6 631 aa18.99■□□□□ 0.63
CROCCP3-204ENST00000590118 AMER1Q5JTC6 1135 aaPredicted RBP18.99■□□□□ 0.63
CROCCP3-204ENST00000590118 NPM2Q86SE8 214 aaKnown RBP18.99■□□□□ 0.63
CROCCP3-204ENST00000590118 HACL1Q9UJ83 578 aa18.99■□□□□ 0.63
CROCCP3-204ENST00000590118 TEFQ10587 303 aa18.98■□□□□ 0.63
CROCCP3-204ENST00000590118 IL17REQ8NFR9 667 aa18.98■□□□□ 0.63
CROCCP3-204ENST00000590118 CLEC11AQ9Y240 323 aa18.98■□□□□ 0.63
CROCCP3-204ENST00000590118 ZNF541Q9H0D2 1346 aa18.98■□□□□ 0.63
CROCCP3-204ENST00000590118 ADAMTSL1Q8N6G6 1762 aa18.97■□□□□ 0.63
CROCCP3-204ENST00000590118 RASSF10A6NK89 507 aa18.97■□□□□ 0.63
CROCCP3-204ENST00000590118 DIAPH1O60610 1272 aaKnown RBP18.97■□□□□ 0.63
CROCCP3-204ENST00000590118 HSPA8P11142 646 aaKnown RBP18.97■□□□□ 0.63
CROCCP3-204ENST00000590118 EPHX2P34913 555 aa18.97■□□□□ 0.63
CROCCP3-204ENST00000590118 FKBP4Q02790 459 aaKnown RBP eCLIP18.97■□□□□ 0.63
CROCCP3-204ENST00000590118 DEFB115Q30KQ5 88 aa18.97■□□□□ 0.63
CROCCP3-204ENST00000590118 ABHD8Q96I13 439 aa18.97■□□□□ 0.63
CROCCP3-204ENST00000590118 SIPA1L3O60292 1781 aaPredicted RBP18.96■□□□□ 0.63
CROCCP3-204ENST00000590118 BCORQ6W2J9 1755 aa18.96■□□□□ 0.63
CROCCP3-204ENST00000590118 DZIP3Q86Y13 1208 aaKnown RBP18.96■□□□□ 0.63
CROCCP3-204ENST00000590118 FMNL2Q96PY5 1086 aa18.96■□□□□ 0.63
CROCCP3-204ENST00000590118 ZNF277Q9NRM2 450 aaPredicted RBP18.96■□□□□ 0.63
CROCCP3-204ENST00000590118 GNAT3A8MTJ3 354 aa18.95■□□□□ 0.62
CROCCP3-204ENST00000590118 NPR1P16066 1061 aa18.95■□□□□ 0.62
CROCCP3-204ENST00000590118 PNMA8AQ86V59 439 aaPredicted RBP18.95■□□□□ 0.62
CROCCP3-204ENST00000590118 CNTROBQ8N137 903 aa18.95■□□□□ 0.62
CROCCP3-204ENST00000590118 MAP2K1Q02750 393 aaPredicted RBP18.94■□□□□ 0.62
CROCCP3-204ENST00000590118 FAM161AQ3B820 660 aa18.94■□□□□ 0.62
CROCCP3-204ENST00000590118 MAP1SQ66K74 1059 aaPredicted RBP18.94■□□□□ 0.62
CROCCP3-204ENST00000590118 CLEC4GQ6UXB4 293 aa18.94■□□□□ 0.62
CROCCP3-204ENST00000590118 NBPF5PQ86XG9 351 aaPredicted RBP18.94■□□□□ 0.62
CROCCP3-204ENST00000590118 WDR33Q9C0J8 1336 aaKnown RBP18.94■□□□□ 0.62
CROCCP3-204ENST00000590118 KLRG2A4D1S0 409 aaPredicted RBP18.93■□□□□ 0.62
CROCCP3-204ENST00000590118 OLFM4Q6UX06 510 aa18.93■□□□□ 0.62
CROCCP3-204ENST00000590118 RTKN2Q8IZC4 609 aa18.93■□□□□ 0.62
CROCCP3-204ENST00000590118 GAS2L2Q8NHY3 880 aa18.93■□□□□ 0.62
CROCCP3-204ENST00000590118 RNF123Q5XPI4 1314 aa18.93■□□□□ 0.62
CROCCP3-204ENST00000590118 FZD9O00144 591 aa18.92■□□□□ 0.62
CROCCP3-204ENST00000590118 KCNQ3O43525 872 aa18.92■□□□□ 0.62
CROCCP3-204ENST00000590118 IARSP41252 1262 aaKnown RBP18.91■□□□□ 0.62
CROCCP3-204ENST00000590118 PIP4K2AP48426 406 aaPredicted RBP18.91■□□□□ 0.62
CROCCP3-204ENST00000590118 ABT1Q9ULW3 272 aaKnown RBP18.91■□□□□ 0.62
CROCCP3-204ENST00000590118 USP16Q9Y5T5 823 aa18.91■□□□□ 0.62
CROCCP3-204ENST00000590118 GPC2Q8N158 579 aa18.9■□□□□ 0.62
CROCCP3-204ENST00000590118 SYNE4Q8N205 404 aa18.9■□□□□ 0.62
CROCCP3-204ENST00000590118 TPTE2Q6XPS3 522 aa18.89■□□□□ 0.61
CROCCP3-204ENST00000590118 DDX21Q9NR30 783 aaKnown RBP eCLIP18.89■□□□□ 0.61
CROCCP3-204ENST00000590118 ZNF652Q9Y2D9 606 aa18.89■□□□□ 0.61
CROCCP3-204ENST00000590118 CLSPNQ9HAW4 1339 aa18.89■□□□□ 0.61
CROCCP3-204ENST00000590118 CEMIPQ8WUJ3 1361 aa18.89■□□□□ 0.61
CROCCP3-204ENST00000590118 BTBD11A6QL63 1104 aa18.88■□□□□ 0.61
CROCCP3-204ENST00000590118 U2SURPO15042 1029 aaKnown RBP18.87■□□□□ 0.61
CROCCP3-204ENST00000590118 ALDH1B1P30837 517 aa18.87■□□□□ 0.61
CROCCP3-204ENST00000590118 TRIM26Q12899 539 aaPredicted RBP18.87■□□□□ 0.61
CROCCP3-204ENST00000590118 NIP7Q9Y221 180 aaKnown RBP eCLIP18.87■□□□□ 0.61
CROCCP3-204ENST00000590118 PRAMEF22A3QJZ6 481 aa18.86■□□□□ 0.61
CROCCP3-204ENST00000590118 JDP2Q8WYK2 163 aa18.86■□□□□ 0.61
CROCCP3-204ENST00000590118 COL3A1P02461 1466 aaPredicted RBP18.85■□□□□ 0.61
CROCCP3-204ENST00000590118 SNED1Q8TER0 1413 aa18.85■□□□□ 0.61
CROCCP3-204ENST00000590118 CCDC85CA6NKD9 419 aa18.85■□□□□ 0.61
CROCCP3-204ENST00000590118 RGL2O15211 777 aa18.85■□□□□ 0.61
CROCCP3-204ENST00000590118 PER1O15534 1290 aaPredicted RBP18.85■□□□□ 0.61
CROCCP3-204ENST00000590118 RGS19P49795 217 aa18.85■□□□□ 0.61
CROCCP3-204ENST00000590118 MLLT1Q03111 559 aaPredicted RBP18.85■□□□□ 0.61
CROCCP3-204ENST00000590118 CC2D1BQ5T0F9 858 aaKnown RBP18.85■□□□□ 0.61
CROCCP3-204ENST00000590118 CAPNS2Q96L46 248 aa18.85■□□□□ 0.61
CROCCP3-204ENST00000590118 PSMD1Q99460 953 aa18.85■□□□□ 0.61
CROCCP3-204ENST00000590118 THSD7BQ9C0I4 1608 aa18.85■□□□□ 0.61
CROCCP3-204ENST00000590118 FAM177BA6PVY3 158 aa18.84■□□□□ 0.61
CROCCP3-204ENST00000590118 SNRPA1P09661 255 aaKnown RBP18.84■□□□□ 0.61
CROCCP3-204ENST00000590118 ECE1P42892 770 aa18.84■□□□□ 0.61
CROCCP3-204ENST00000590118 EIF6P56537 245 aaKnown RBP18.84■□□□□ 0.61
CROCCP3-204ENST00000590118 FMR1Q06787 632 aaKnown RBP eCLIP18.84■□□□□ 0.61
CROCCP3-204ENST00000590118 BEGAINQ9BUH8 593 aa18.84■□□□□ 0.61
CROCCP3-204ENST00000590118 TRPM7Q96QT4 1865 aa18.84■□□□□ 0.61
CROCCP3-204ENST00000590118 LTBP1Q14766 1721 aa18.83■□□□□ 0.61
CROCCP3-204ENST00000590118 NBPF26B4DH59 902 aa18.83■□□□□ 0.6
CROCCP3-204ENST00000590118 LMOD1P29536 600 aaPredicted RBP18.83■□□□□ 0.6
CROCCP3-204ENST00000590118 NBPF10Q6P3W6 841 aaKnown RBP18.83■□□□□ 0.6
CROCCP3-204ENST00000590118 NBPF15Q8N660 670 aa18.83■□□□□ 0.6
CROCCP3-204ENST00000590118 PHACTR3Q96KR7 559 aa18.83■□□□□ 0.6
CROCCP3-204ENST00000590118 GPR101Q96P66 508 aaPredicted RBP18.83■□□□□ 0.6
CROCCP3-204ENST00000590118 GJA3Q9Y6H8 435 aa18.83■□□□□ 0.6
CROCCP3-204ENST00000590118 CYP4F22Q6NT55 531 aa18.82■□□□□ 0.6
CROCCP3-204ENST00000590118 PAXIP1Q6ZW49 1069 aaPredicted RBP18.82■□□□□ 0.6
CROCCP3-204ENST00000590118 COL4A5P29400 1685 aa18.82■□□□□ 0.6
CROCCP3-204ENST00000590118 GTF2E1P29083 439 aaPredicted RBP18.81■□□□□ 0.6
CROCCP3-204ENST00000590118 EPS15P42566 896 aa18.81■□□□□ 0.6
CROCCP3-204ENST00000590118 SCNN1DP51172 638 aa18.81■□□□□ 0.6
CROCCP3-204ENST00000590118 CST9Q5W186 159 aa18.81■□□□□ 0.6
CROCCP3-204ENST00000590118 CC2D2BQ6DHV5 1058 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms