RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 C7orf43Q8WVR3 580 aa17.4■□□□□ 0.38
PRKCSH-210ENST00000589990 AIDAQ96BJ3 306 aa17.4■□□□□ 0.38
PRKCSH-210ENST00000589990 HSPA8P11142 646 aaKnown RBP17.39■□□□□ 0.37
PRKCSH-210ENST00000589990 TTC5Q8N0Z6 440 aa17.39■□□□□ 0.37
PRKCSH-210ENST00000589990 CNKSR1Q969H4 720 aa17.39■□□□□ 0.37
PRKCSH-210ENST00000589990 ABHD8Q96I13 439 aa17.39■□□□□ 0.37
PRKCSH-210ENST00000589990 ZNF277Q9NRM2 450 aaPredicted RBP17.39■□□□□ 0.37
PRKCSH-210ENST00000589990 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
PRKCSH-210ENST00000589990 IQCA1LA6NCM1 817 aa17.38■□□□□ 0.37
PRKCSH-210ENST00000589990 KCNQ3O43525 872 aa17.38■□□□□ 0.37
PRKCSH-210ENST00000589990 AMER1Q5JTC6 1135 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-210ENST00000589990 MAP1SQ66K74 1059 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-210ENST00000589990 IL17REQ8NFR9 667 aa17.38■□□□□ 0.37
PRKCSH-210ENST00000589990 MASTLQ96GX5 879 aa17.38■□□□□ 0.37
PRKCSH-210ENST00000589990 SETDB2Q96T68 719 aa17.38■□□□□ 0.37
PRKCSH-210ENST00000589990 IL6STP40189 918 aaPredicted RBP17.37■□□□□ 0.37
PRKCSH-210ENST00000589990 FMR1Q06787 632 aaKnown RBP eCLIP17.37■□□□□ 0.37
PRKCSH-210ENST00000589990 ZNF790Q6PG37 636 aa17.37■□□□□ 0.37
PRKCSH-210ENST00000589990 CLEC11AQ9Y240 323 aa17.37■□□□□ 0.37
PRKCSH-210ENST00000589990 RNF123Q5XPI4 1314 aa17.37■□□□□ 0.37
PRKCSH-210ENST00000589990 NPHP1O15259 732 aa17.36■□□□□ 0.37
PRKCSH-210ENST00000589990 KNSTRNQ9Y448 316 aa17.36■□□□□ 0.37
PRKCSH-210ENST00000589990 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
PRKCSH-210ENST00000589990 RASSF10A6NK89 507 aa17.35■□□□□ 0.37
PRKCSH-210ENST00000589990 EPHX2P34913 555 aa17.35■□□□□ 0.37
PRKCSH-210ENST00000589990 ST5P78524 1137 aa17.35■□□□□ 0.37
PRKCSH-210ENST00000589990 HACL1Q9UJ83 578 aa17.35■□□□□ 0.37
PRKCSH-210ENST00000589990 COL4A5P29400 1685 aa17.34■□□□□ 0.37
PRKCSH-210ENST00000589990 EIF4G2P78344 907 aaKnown RBP eCLIP17.34■□□□□ 0.37
PRKCSH-210ENST00000589990 LTBP1Q14766 1721 aa17.34■□□□□ 0.37
PRKCSH-210ENST00000589990 CCDC93Q567U6 631 aa17.34■□□□□ 0.37
PRKCSH-210ENST00000589990 DZIP3Q86Y13 1208 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-210ENST00000589990 CNTROBQ8N137 903 aa17.34■□□□□ 0.37
PRKCSH-210ENST00000589990 WDR33Q9C0J8 1336 aaKnown RBP17.33■□□□□ 0.36
PRKCSH-210ENST00000589990 FKBP4Q02790 459 aaKnown RBP eCLIP17.33■□□□□ 0.36
PRKCSH-210ENST00000589990 DEFB115Q30KQ5 88 aa17.33■□□□□ 0.36
PRKCSH-210ENST00000589990 SOGA3Q5TF21 947 aa17.33■□□□□ 0.36
PRKCSH-210ENST00000589990 SLC51AQ86UW1 340 aa17.33■□□□□ 0.36
PRKCSH-210ENST00000589990 USP16Q9Y5T5 823 aa17.33■□□□□ 0.36
PRKCSH-210ENST00000589990 DIAPH1O60610 1272 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-210ENST00000589990 TEFQ10587 303 aa17.32■□□□□ 0.36
PRKCSH-210ENST00000589990 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-210ENST00000589990 COL3A1P02461 1466 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-210ENST00000589990 FAM177BA6PVY3 158 aa17.31■□□□□ 0.36
PRKCSH-210ENST00000589990 FMNL2Q96PY5 1086 aa17.31■□□□□ 0.36
PRKCSH-210ENST00000589990 TEX13AQ9BXU3 409 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-210ENST00000589990 ABT1Q9ULW3 272 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-210ENST00000589990 THSD7BQ9C0I4 1608 aa17.31■□□□□ 0.36
PRKCSH-210ENST00000589990 KLRG2A4D1S0 409 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-210ENST00000589990 FZD9O00144 591 aa17.3■□□□□ 0.36
PRKCSH-210ENST00000589990 NPR1P16066 1061 aa17.3■□□□□ 0.36
PRKCSH-210ENST00000589990 TSKSQ9UJT2 592 aa17.3■□□□□ 0.36
PRKCSH-210ENST00000589990 TIMELESSQ9UNS1 1208 aa17.3■□□□□ 0.36
PRKCSH-210ENST00000589990 SNED1Q8TER0 1413 aa17.3■□□□□ 0.36
PRKCSH-210ENST00000589990 GNAT3A8MTJ3 354 aa17.29■□□□□ 0.36
PRKCSH-210ENST00000589990 IARSP41252 1262 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-210ENST00000589990 SYNE4Q8N205 404 aa17.29■□□□□ 0.36
PRKCSH-210ENST00000589990 CCDC85CA6NKD9 419 aa17.28■□□□□ 0.36
PRKCSH-210ENST00000589990 GRM1Q13255 1194 aa17.28■□□□□ 0.36
PRKCSH-210ENST00000589990 CC2D1BQ5T0F9 858 aaKnown RBP17.28■□□□□ 0.36
PRKCSH-210ENST00000589990 DDX21Q9NR30 783 aaKnown RBP eCLIP17.28■□□□□ 0.36
PRKCSH-210ENST00000589990 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
PRKCSH-210ENST00000589990 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-210ENST00000589990 MAP2K1Q02750 393 aaPredicted RBP17.27■□□□□ 0.36
PRKCSH-210ENST00000589990 CYP4F22Q6NT55 531 aa17.27■□□□□ 0.36
PRKCSH-210ENST00000589990 PNMA8AQ86V59 439 aaPredicted RBP17.27■□□□□ 0.36
PRKCSH-210ENST00000589990 TNRC18O15417 2968 aaPredicted RBP17.27■□□□□ 0.35
PRKCSH-210ENST00000589990 BTBD11A6QL63 1104 aa17.26■□□□□ 0.35
PRKCSH-210ENST00000589990 NBPF26B4DH59 902 aa17.26■□□□□ 0.35
PRKCSH-210ENST00000589990 TRAF5O00463 557 aa17.26■□□□□ 0.35
PRKCSH-210ENST00000589990 NBPF10Q6P3W6 841 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-210ENST00000589990 NPM2Q86SE8 214 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-210ENST00000589990 GPC2Q8N158 579 aa17.26■□□□□ 0.35
PRKCSH-210ENST00000589990 NBPF15Q8N660 670 aa17.26■□□□□ 0.35
PRKCSH-210ENST00000589990 PHACTR3Q96KR7 559 aa17.26■□□□□ 0.35
PRKCSH-210ENST00000589990 CAPNS2Q96L46 248 aa17.26■□□□□ 0.35
PRKCSH-210ENST00000589990 NIP7Q9Y221 180 aaKnown RBP eCLIP17.26■□□□□ 0.35
PRKCSH-210ENST00000589990 GJA3Q9Y6H8 435 aa17.26■□□□□ 0.35
PRKCSH-210ENST00000589990 EPS15P42566 896 aa17.25■□□□□ 0.35
PRKCSH-210ENST00000589990 TRIM26Q12899 539 aaPredicted RBP17.25■□□□□ 0.35
PRKCSH-210ENST00000589990 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
PRKCSH-210ENST00000589990 HLFQ16534 295 aa17.25■□□□□ 0.35
PRKCSH-210ENST00000589990 CST9Q5W186 159 aa17.25■□□□□ 0.35
PRKCSH-210ENST00000589990 PAXIP1Q6ZW49 1069 aaPredicted RBP17.25■□□□□ 0.35
PRKCSH-210ENST00000589990 RTKN2Q8IZC4 609 aa17.25■□□□□ 0.35
PRKCSH-210ENST00000589990 ABCC12Q96J65 1359 aa17.25■□□□□ 0.35
PRKCSH-210ENST00000589990 PER1O15534 1290 aaPredicted RBP17.24■□□□□ 0.35
PRKCSH-210ENST00000589990 AOC2O75106 756 aa17.24■□□□□ 0.35
PRKCSH-210ENST00000589990 SCNN1DP51172 638 aa17.24■□□□□ 0.35
PRKCSH-210ENST00000589990 MLLT1Q03111 559 aaPredicted RBP17.24■□□□□ 0.35
PRKCSH-210ENST00000589990 CLEC4GQ6UXB4 293 aa17.24■□□□□ 0.35
PRKCSH-210ENST00000589990 GAS2L2Q8NHY3 880 aa17.24■□□□□ 0.35
PRKCSH-210ENST00000589990 TPTE2Q6XPS3 522 aa17.23■□□□□ 0.35
PRKCSH-210ENST00000589990 GPR101Q96P66 508 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-210ENST00000589990 KIF7Q2M1P5 1343 aa17.22■□□□□ 0.35
PRKCSH-210ENST00000589990 TRPM7Q96QT4 1865 aa17.22■□□□□ 0.35
PRKCSH-210ENST00000589990 RGS19P49795 217 aa17.22■□□□□ 0.35
PRKCSH-210ENST00000589990 NUTM1Q86Y26 1132 aa17.22■□□□□ 0.35
PRKCSH-210ENST00000589990 PSMD1Q99460 953 aa17.21■□□□□ 0.35
PRKCSH-210ENST00000589990 ZNF652Q9Y2D9 606 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms