RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, human

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-213	ENST00000589933	TIAM2	Q8IVF5	1701 aa		27.87	■■■□□ 2.05
TMC6-213	ENST00000589933	DICER1	Q9UPY3	1922 aa	Known RBP	27.87	■■■□□ 2.05
TMC6-213	ENST00000589933	SOGA3	Q5TF21	947 aa		27.87	■■■□□ 2.05
TMC6-213	ENST00000589933	STYK1	Q6J9G0	422 aa		27.87	■■■□□ 2.05
TMC6-213	ENST00000589933	CCDC24	Q8N4L8	307 aa		27.87	■■■□□ 2.05
TMC6-213	ENST00000589933	COL11A2	P13942	1736 aa	Predicted RBP	27.87	■■■□□ 2.05
TMC6-213	ENST00000589933	MASTL	Q96GX5	879 aa		27.86	■■■□□ 2.05
TMC6-213	ENST00000589933	FER1L6	Q2WGJ9	1857 aa		27.86	■■■□□ 2.05
TMC6-213	ENST00000589933	GLTPD2	A6NH11	291 aa		27.85	■■■□□ 2.05
TMC6-213	ENST00000589933	C21orf2	O43822	256 aa		27.85	■■■□□ 2.05
TMC6-213	ENST00000589933	NFE2L2	Q16236	605 aa		27.85	■■■□□ 2.05
TMC6-213	ENST00000589933	DPY19L2	Q6NUT2	758 aa		27.85	■■■□□ 2.05
TMC6-213	ENST00000589933	TPTE2	Q6XPS3	522 aa		27.85	■■■□□ 2.05
TMC6-213	ENST00000589933	ZNF219	Q9P2Y4	722 aa	Predicted RBP	27.85	■■■□□ 2.05
TMC6-213	ENST00000589933	ARFGEF2	Q9Y6D5	1785 aa		27.84	■■■□□ 2.05
TMC6-213	ENST00000589933	NIP7	Q9Y221	180 aa	Known RBP eCLIP	27.84	■■■□□ 2.05
TMC6-213	ENST00000589933	KDM3B	Q7LBC6	1761 aa		27.83	■■■□□ 2.05
TMC6-213	ENST00000589933	VEGFA	P15692	232 aa	Predicted RBP	27.83	■■■□□ 2.05
TMC6-213	ENST00000589933	MIS18A	Q9NYP9	233 aa		27.83	■■■□□ 2.05
TMC6-213	ENST00000589933	NBPF26	B4DH59	902 aa		27.82	■■■□□ 2.04
TMC6-213	ENST00000589933	NFKBIE	O00221	500 aa		27.82	■■■□□ 2.04
TMC6-213	ENST00000589933	SRGN	P10124	158 aa		27.82	■■■□□ 2.04
TMC6-213	ENST00000589933	RALBP1	Q15311	655 aa		27.82	■■■□□ 2.04
TMC6-213	ENST00000589933	NBPF10	Q6P3W6	841 aa	Known RBP	27.82	■■■□□ 2.04
TMC6-213	ENST00000589933	NBPF15	Q8N660	670 aa		27.82	■■■□□ 2.04
TMC6-213	ENST00000589933	PLEKHF1	Q96S99	279 aa		27.82	■■■□□ 2.04
TMC6-213	ENST00000589933	SLX4	Q8IY92	1834 aa		27.81	■■■□□ 2.04
TMC6-213	ENST00000589933	GTF2E1	P29083	439 aa	Predicted RBP	27.81	■■■□□ 2.04
TMC6-213	ENST00000589933	SMC1B	Q8NDV3	1235 aa		27.81	■■■□□ 2.04
TMC6-213	ENST00000589933	TAOK3	Q9H2K8	898 aa		27.81	■■■□□ 2.04
TMC6-213	ENST00000589933	WDR90	Q96KV7	1748 aa		27.81	■■■□□ 2.04
TMC6-213	ENST00000589933	ERFE	Q4G0M1	354 aa		27.8	■■■□□ 2.04
TMC6-213	ENST00000589933	LTBP3	Q9NS15	1303 aa		27.79	■■■□□ 2.04
TMC6-213	ENST00000589933	PRPF40B	Q6NWY9	871 aa	Known RBP	27.79	■■■□□ 2.04
TMC6-213	ENST00000589933	NPR1	P16066	1061 aa		27.78	■■■□□ 2.04
TMC6-213	ENST00000589933	NUP98	P52948	1817 aa		27.78	■■■□□ 2.04
TMC6-213	ENST00000589933	KIF6	Q6ZMV9	814 aa		27.77	■■■□□ 2.04
TMC6-213	ENST00000589933	PRELP	P51888	382 aa		27.76	■■■□□ 2.03
TMC6-213	ENST00000589933	EIF4A1	P60842	406 aa	Known RBP	27.76	■■■□□ 2.03
TMC6-213	ENST00000589933	NGEF	Q8N5V2	710 aa		27.76	■■■□□ 2.03
TMC6-213	ENST00000589933	NYX	Q9GZU5	481 aa		27.76	■■■□□ 2.03
TMC6-213	ENST00000589933	FAM177B	A6PVY3	158 aa		27.75	■■■□□ 2.03
TMC6-213	ENST00000589933	ERVV-1	B6SEH8	477 aa		27.75	■■■□□ 2.03
TMC6-213	ENST00000589933	LMOD3	Q0VAK6	560 aa		27.75	■■■□□ 2.03
TMC6-213	ENST00000589933	RRP7A	Q9Y3A4	280 aa	Known RBP	27.75	■■■□□ 2.03
TMC6-213	ENST00000589933	ALDH1B1	P30837	517 aa		27.73	■■■□□ 2.03
TMC6-213	ENST00000589933	CCDC93	Q567U6	631 aa		27.73	■■■□□ 2.03
TMC6-213	ENST00000589933	THUMPD2	Q9BTF0	503 aa	Known RBP	27.73	■■■□□ 2.03
TMC6-213	ENST00000589933	MAP3K15	Q6ZN16	1313 aa		27.72	■■■□□ 2.03
TMC6-213	ENST00000589933	RIPK4	P57078	832 aa		27.72	■■■□□ 2.03
TMC6-213	ENST00000589933	HLF	Q16534	295 aa		27.72	■■■□□ 2.03
TMC6-213	ENST00000589933	TSPYL4	Q9UJ04	414 aa		27.72	■■■□□ 2.03
TMC6-213	ENST00000589933	CEP350	Q5VT06	3117 aa		27.72	■■■□□ 2.03
TMC6-213	ENST00000589933	ERBB4	Q15303	1308 aa		27.71	■■■□□ 2.03
TMC6-213	ENST00000589933	KLRG2	A4D1S0	409 aa	Predicted RBP	27.71	■■■□□ 2.03
TMC6-213	ENST00000589933	MYL6B	P14649	208 aa		27.71	■■■□□ 2.03
TMC6-213	ENST00000589933	DNAJC5G	Q8N7S2	189 aa		27.7	■■■□□ 2.02
TMC6-213	ENST00000589933	RTKN2	Q8IZC4	609 aa		27.69	■■■□□ 2.02
TMC6-213	ENST00000589933	BABAM1	Q9NWV8	329 aa		27.69	■■■□□ 2.02
TMC6-213	ENST00000589933	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.67	■■■□□ 2.02
TMC6-213	ENST00000589933	DDX10	Q13206	875 aa	Known RBP	27.66	■■■□□ 2.02
TMC6-213	ENST00000589933	KLRG1	Q96E93	195 aa		27.66	■■■□□ 2.02
TMC6-213	ENST00000589933	FKBP4	Q02790	459 aa	Known RBP eCLIP	27.65	■■■□□ 2.02
TMC6-213	ENST00000589933	C7orf43	Q8WVR3	580 aa		27.65	■■■□□ 2.02
TMC6-213	ENST00000589933	RPGR	Q92834	1020 aa	Known RBP	27.65	■■■□□ 2.02
TMC6-213	ENST00000589933	ZBTB3	Q9H5J0	574 aa		27.65	■■■□□ 2.02
TMC6-213	ENST00000589933	TMPO	P42166	694 aa	Known RBP	27.64	■■■□□ 2.02
TMC6-213	ENST00000589933	IFFO2	Q5TF58	517 aa		27.64	■■■□□ 2.02
TMC6-213	ENST00000589933	TTLL7	Q6ZT98	887 aa		27.64	■■■□□ 2.02
TMC6-213	ENST00000589933	IBTK	Q9P2D0	1353 aa	Predicted RBP	27.63	■■■□□ 2.01
TMC6-213	ENST00000589933	IQCA1L	A6NCM1	817 aa		27.63	■■■□□ 2.01
TMC6-213	ENST00000589933	WDR43	Q15061	677 aa	Known RBP eCLIP	27.63	■■■□□ 2.01	4e-6	■■□□□ 14
TMC6-213	ENST00000589933	PPP1R42	Q7Z4L9	355 aa		27.63	■■■□□ 2.01
TMC6-213	ENST00000589933	SCN4A	P35499	1836 aa		27.62	■■■□□ 2.01
TMC6-213	ENST00000589933	EIF2S2	P20042	333 aa	Known RBP	27.62	■■■□□ 2.01
TMC6-213	ENST00000589933	GPT	P24298	496 aa		27.62	■■■□□ 2.01
TMC6-213	ENST00000589933	CC2D2B	Q6DHV5	1058 aa		27.62	■■■□□ 2.01
TMC6-213	ENST00000589933	GIGYF2	Q6Y7W6	1299 aa	Known RBP	27.62	■■■□□ 2.01
TMC6-213	ENST00000589933	NUTM1	Q86Y26	1132 aa		27.62	■■■□□ 2.01
TMC6-213	ENST00000589933	DDN	O94850	711 aa	Predicted RBP	27.61	■■■□□ 2.01
TMC6-213	ENST00000589933	POTEC	B2RU33	542 aa		27.6	■■■□□ 2.01
TMC6-213	ENST00000589933	HTRA3	P83110	453 aa		27.6	■■■□□ 2.01
TMC6-213	ENST00000589933	PARP10	Q53GL7	1025 aa		27.6	■■■□□ 2.01
TMC6-213	ENST00000589933	CRY2	Q49AN0	593 aa		27.59	■■■□□ 2.01
TMC6-213	ENST00000589933	GRIPAP1	Q4V328	841 aa		27.59	■■■□□ 2.01
TMC6-213	ENST00000589933	RIC1	Q4ADV7	1423 aa		27.58	■■■□□ 2.01
TMC6-213	ENST00000589933	NEUROD2	Q15784	382 aa		27.58	■■■□□ 2.01
TMC6-213	ENST00000589933	ZNF34	Q8IZ26	560 aa		27.58	■■■□□ 2.01
TMC6-213	ENST00000589933	RBM17	Q96I25	401 aa	Known RBP	27.58	■■■□□ 2.01
TMC6-213	ENST00000589933	TMX4	Q9H1E5	349 aa	Predicted RBP	27.58	■■■□□ 2.01
TMC6-213	ENST00000589933	ZNF277	Q9NRM2	450 aa	Predicted RBP	27.58	■■■□□ 2.01
TMC6-213	ENST00000589933	SUSD4	Q5VX71	490 aa		27.57	■■■□□ 2
TMC6-213	ENST00000589933	CHADL	Q6NUI6	762 aa		27.57	■■■□□ 2
TMC6-213	ENST00000589933	RUNDC1	Q96C34	613 aa		27.57	■■■□□ 2
TMC6-213	ENST00000589933	ABCC12	Q96J65	1359 aa		27.57	■■■□□ 2
TMC6-213	ENST00000589933	IARS	P41252	1262 aa	Known RBP	27.56	■■■□□ 2
TMC6-213	ENST00000589933	SYNE4	Q8N205	404 aa		27.56	■■■□□ 2
TMC6-213	ENST00000589933	JMY	Q8N9B5	988 aa		27.56	■■■□□ 2
TMC6-213	ENST00000589933	JDP2	Q8WYK2	163 aa		27.56	■■■□□ 2
TMC6-213	ENST00000589933	UBN2	Q6ZU65	1347 aa		27.56	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms