RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 BICDL1Q6ZP65 573 aa10.97□□□□□ -0.65
TPM4-211ENST00000589897 TNRC6CQ9HCJ0 1690 aaKnown RBP10.96□□□□□ -0.65
TPM4-211ENST00000589897 PASKQ96RG2 1323 aa10.96□□□□□ -0.65
TPM4-211ENST00000589897 KCNQ3O43525 872 aa10.96□□□□□ -0.65
TPM4-211ENST00000589897 A1BGP04217 495 aa10.96□□□□□ -0.65
TPM4-211ENST00000589897 SNRPA1P09661 255 aaKnown RBP10.96□□□□□ -0.65
TPM4-211ENST00000589897 IL6STP40189 918 aaPredicted RBP10.96□□□□□ -0.65
TPM4-211ENST00000589897 EIF5P55010 431 aaKnown RBP10.96□□□□□ -0.65
TPM4-211ENST00000589897 NFIXQ14938 502 aa10.96□□□□□ -0.65
TPM4-211ENST00000589897 PNISRQ8TF01 805 aaKnown RBP10.96□□□□□ -0.65
TPM4-211ENST00000589897 PDZRN3Q9UPQ7 1066 aa10.96□□□□□ -0.65
TPM4-211ENST00000589897 TBC1D2BQ9UPU7 963 aa10.96□□□□□ -0.65
TPM4-211ENST00000589897 RASSF10A6NK89 507 aa10.95□□□□□ -0.66
TPM4-211ENST00000589897 SERPINB2P05120 415 aa10.95□□□□□ -0.66
TPM4-211ENST00000589897 NFE2L2Q16236 605 aa10.95□□□□□ -0.66
TPM4-211ENST00000589897 DLG5Q8TDM6 1919 aa10.94□□□□□ -0.66
TPM4-211ENST00000589897 MYBBP1AQ9BQG0 1328 aaKnown RBP10.94□□□□□ -0.66
TPM4-211ENST00000589897 WDR33Q9C0J8 1336 aaKnown RBP10.94□□□□□ -0.66
TPM4-211ENST00000589897 NFKBIEO00221 500 aa10.94□□□□□ -0.66
TPM4-211ENST00000589897 WDR43Q15061 677 aaKnown RBP eCLIP10.94□□□□□ -0.66
TPM4-211ENST00000589897 DZIP3Q86Y13 1208 aaKnown RBP10.94□□□□□ -0.66
TPM4-211ENST00000589897 C2CD5Q86YS7 1000 aa10.94□□□□□ -0.66
TPM4-211ENST00000589897 CFAP44Q96MT7 982 aa10.94□□□□□ -0.66
TPM4-211ENST00000589897 MIS18AQ9NYP9 233 aa10.94□□□□□ -0.66
TPM4-211ENST00000589897 USP16Q9Y5T5 823 aa10.94□□□□□ -0.66
TPM4-211ENST00000589897 DDNO94850 711 aaPredicted RBP10.93□□□□□ -0.66
TPM4-211ENST00000589897 ITGBL1O95965 494 aaPredicted RBP10.93□□□□□ -0.66
TPM4-211ENST00000589897 ECE1P42892 770 aa10.93□□□□□ -0.66
TPM4-211ENST00000589897 PLEKHF1Q96S99 279 aa10.93□□□□□ -0.66
TPM4-211ENST00000589897 SETDB2Q96T68 719 aa10.93□□□□□ -0.66
TPM4-211ENST00000589897 ZNF652Q9Y2D9 606 aa10.93□□□□□ -0.66
TPM4-211ENST00000589897 POTEIP0CG38 1075 aa10.92□□□□□ -0.66
TPM4-211ENST00000589897 POTEJP0CG39 1038 aa10.92□□□□□ -0.66
TPM4-211ENST00000589897 ZEB1P37275 1124 aaPredicted RBP10.92□□□□□ -0.66
TPM4-211ENST00000589897 PIP4K2AP48426 406 aaPredicted RBP10.92□□□□□ -0.66
TPM4-211ENST00000589897 RIPK4P57078 832 aa10.92□□□□□ -0.66
TPM4-211ENST00000589897 LMOD3Q0VAK6 560 aa10.92□□□□□ -0.66
TPM4-211ENST00000589897 TBC1D9BQ66K14 1250 aa10.92□□□□□ -0.66
TPM4-211ENST00000589897 PNMA8AQ86V59 439 aaPredicted RBP10.92□□□□□ -0.66
TPM4-211ENST00000589897 TAF1DQ9H5J8 278 aaPredicted RBP10.92□□□□□ -0.66
TPM4-211ENST00000589897 BCL2L12Q9HB09 334 aa10.92□□□□□ -0.66
TPM4-211ENST00000589897 CLEC11AQ9Y240 323 aa10.92□□□□□ -0.66
TPM4-211ENST00000589897 AFDNP55196 1824 aaKnown RBP10.92□□□□□ -0.66
TPM4-211ENST00000589897 KIAA1551Q9HCM1 1747 aa10.92□□□□□ -0.66
TPM4-211ENST00000589897 PRAMEF22A3QJZ6 481 aa10.91□□□□□ -0.66
TPM4-211ENST00000589897 SOGA3Q5TF21 947 aa10.91□□□□□ -0.66
TPM4-211ENST00000589897 CNTROBQ8N137 903 aa10.91□□□□□ -0.66
TPM4-211ENST00000589897 ZNF622Q969S3 477 aaKnown RBP eCLIP10.91□□□□□ -0.66
TPM4-211ENST00000589897 L3MBTL3Q96JM7 780 aaPredicted RBP10.91□□□□□ -0.66
TPM4-211ENST00000589897 ABT1Q9ULW3 272 aaKnown RBP10.91□□□□□ -0.66
TPM4-211ENST00000589897 CARMIL3Q8ND23 1372 aa10.9□□□□□ -0.66
TPM4-211ENST00000589897 LTBP3Q9NS15 1303 aa10.9□□□□□ -0.66
TPM4-211ENST00000589897 BRCA1P38398 1863 aaKnown RBP10.9□□□□□ -0.66
TPM4-211ENST00000589897 CA12O43570 354 aa10.9□□□□□ -0.66
TPM4-211ENST00000589897 C21orf2O43822 256 aa10.9□□□□□ -0.66
TPM4-211ENST00000589897 CAMTA2O94983 1202 aa10.9□□□□□ -0.66
TPM4-211ENST00000589897 PDE6BP35913 854 aa10.9□□□□□ -0.66
TPM4-211ENST00000589897 ST5P78524 1137 aa10.9□□□□□ -0.66
TPM4-211ENST00000589897 NEUROD2Q15784 382 aa10.9□□□□□ -0.66
TPM4-211ENST00000589897 EAPPQ56P03 285 aaPredicted RBP10.9□□□□□ -0.66
TPM4-211ENST00000589897 NGEFQ8N5V2 710 aa10.9□□□□□ -0.66
TPM4-211ENST00000589897 CNBD1Q8NA66 436 aa10.9□□□□□ -0.66
TPM4-211ENST00000589897 THUMPD2Q9BTF0 503 aaKnown RBP10.9□□□□□ -0.66
TPM4-211ENST00000589897 TAOK3Q9H2K8 898 aa10.9□□□□□ -0.66
TPM4-211ENST00000589897 TSPYL4Q9UJ04 414 aa10.9□□□□□ -0.66
TPM4-211ENST00000589897 ARFGEF1Q9Y6D6 1849 aa10.9□□□□□ -0.66
TPM4-211ENST00000589897 CLEC4GQ6UXB4 293 aa10.89□□□□□ -0.67
TPM4-211ENST00000589897 NBPF5PQ86XG9 351 aaPredicted RBP10.89□□□□□ -0.67
TPM4-211ENST00000589897 CCDC146Q8IYE0 955 aa10.89□□□□□ -0.67
TPM4-211ENST00000589897 GPR101Q96P66 508 aaPredicted RBP10.89□□□□□ -0.67
TPM4-211ENST00000589897 HACL1Q9UJ83 578 aa10.89□□□□□ -0.67
TPM4-211ENST00000589897 RRP7AQ9Y3A4 280 aaKnown RBP10.89□□□□□ -0.67
TPM4-211ENST00000589897 SCN7AQ01118 1682 aa10.89□□□□□ -0.67
TPM4-211ENST00000589897 GTF2E1P29083 439 aaPredicted RBP10.88□□□□□ -0.67
TPM4-211ENST00000589897 MAP2K2P36507 400 aa10.88□□□□□ -0.67
TPM4-211ENST00000589897 TMPOP42166 694 aaKnown RBP10.88□□□□□ -0.67
TPM4-211ENST00000589897 EIF4A1P60842 406 aaKnown RBP10.88□□□□□ -0.67
TPM4-211ENST00000589897 KIF6Q6ZMV9 814 aa10.88□□□□□ -0.67
TPM4-211ENST00000589897 CCDC24Q8N4L8 307 aa10.88□□□□□ -0.67
TPM4-211ENST00000589897 CNKSR1Q969H4 720 aa10.88□□□□□ -0.67
TPM4-211ENST00000589897 RUNDC1Q96C34 613 aa10.88□□□□□ -0.67
TPM4-211ENST00000589897 BRIP1Q9BX63 1249 aa10.88□□□□□ -0.67
TPM4-211ENST00000589897 NRXN2Q9P2S2 1712 aa10.88□□□□□ -0.67
TPM4-211ENST00000589897 FAM177BA6PVY3 158 aa10.87□□□□□ -0.67
TPM4-211ENST00000589897 MYL6BP14649 208 aa10.87□□□□□ -0.67
TPM4-211ENST00000589897 PRR5LQ6MZQ0 368 aa10.87□□□□□ -0.67
TPM4-211ENST00000589897 CAPNS2Q96L46 248 aa10.87□□□□□ -0.67
TPM4-211ENST00000589897 ZNF219Q9P2Y4 722 aaPredicted RBP10.87□□□□□ -0.67
TPM4-211ENST00000589897 NIP7Q9Y221 180 aaKnown RBP eCLIP10.87□□□□□ -0.67
TPM4-211ENST00000589897 LAS1LQ9Y4W2 734 aaKnown RBP10.87□□□□□ -0.67
TPM4-211ENST00000589897 LAMB4A4D0S4 1761 aa10.87□□□□□ -0.67
TPM4-211ENST00000589897 KDM3BQ7LBC6 1761 aa10.87□□□□□ -0.67
TPM4-211ENST00000589897 BCORQ6W2J9 1755 aa10.86□□□□□ -0.67
TPM4-211ENST00000589897 NBPF26B4DH59 902 aa10.86□□□□□ -0.67
TPM4-211ENST00000589897 EIF2S2P20042 333 aaKnown RBP10.86□□□□□ -0.67
TPM4-211ENST00000589897 EPHX2P34913 555 aa10.86□□□□□ -0.67
TPM4-211ENST00000589897 NBPF10Q6P3W6 841 aaKnown RBP10.86□□□□□ -0.67
TPM4-211ENST00000589897 TPTE2Q6XPS3 522 aa10.86□□□□□ -0.67
TPM4-211ENST00000589897 PAXIP1Q6ZW49 1069 aaPredicted RBP10.86□□□□□ -0.67
TPM4-211ENST00000589897 NBPF15Q8N660 670 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms