RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 ZNF622Q969S3 477 aaKnown RBP eCLIP25.4■■□□□ 1.66
PTBP1-215ENST00000589883 RRAGCQ9HB90 399 aa25.4■■□□□ 1.66
PTBP1-215ENST00000589883 TNRC6CQ9HCJ0 1690 aaKnown RBP25.39■■□□□ 1.66
PTBP1-215ENST00000589883 SNRPA1P09661 255 aaKnown RBP25.39■■□□□ 1.66
PTBP1-215ENST00000589883 DZIP3Q86Y13 1208 aaKnown RBP25.39■■□□□ 1.66
PTBP1-215ENST00000589883 CAMTA2O94983 1202 aa25.38■■□□□ 1.65
PTBP1-215ENST00000589883 ST5P78524 1137 aa25.38■■□□□ 1.65
PTBP1-215ENST00000589883 PRR5LQ6MZQ0 368 aa25.38■■□□□ 1.65
PTBP1-215ENST00000589883 CNBD1Q8NA66 436 aa25.38■■□□□ 1.65
PTBP1-215ENST00000589883 THUMPD2Q9BTF0 503 aaKnown RBP25.38■■□□□ 1.65
PTBP1-215ENST00000589883 ZNF652Q9Y2D9 606 aa25.38■■□□□ 1.65
PTBP1-215ENST00000589883 KCNQ3O43525 872 aa25.37■■□□□ 1.65
PTBP1-215ENST00000589883 DLG5Q8TDM6 1919 aa25.37■■□□□ 1.65
PTBP1-215ENST00000589883 IFFO2Q5TF58 517 aa25.36■■□□□ 1.65
PTBP1-215ENST00000589883 CLEC4GQ6UXB4 293 aa25.36■■□□□ 1.65
PTBP1-215ENST00000589883 USP16Q9Y5T5 823 aa25.36■■□□□ 1.65
PTBP1-215ENST00000589883 GLTPD2A6NH11 291 aa25.35■■□□□ 1.65
PTBP1-215ENST00000589883 LMOD3Q0VAK6 560 aa25.35■■□□□ 1.65
PTBP1-215ENST00000589883 CNKSR1Q969H4 720 aa25.35■■□□□ 1.65
PTBP1-215ENST00000589883 VEGFAP15692 232 aaPredicted RBP25.34■■□□□ 1.65
PTBP1-215ENST00000589883 SMC1BQ8NDV3 1235 aa25.34■■□□□ 1.65
PTBP1-215ENST00000589883 TRIM35Q9UPQ4 493 aa25.34■■□□□ 1.65
PTBP1-215ENST00000589883 RGL2O15211 777 aa25.33■■□□□ 1.65
PTBP1-215ENST00000589883 SOGA3Q5TF21 947 aa25.33■■□□□ 1.65
PTBP1-215ENST00000589883 DPY19L2Q6NUT2 758 aa25.33■■□□□ 1.65
PTBP1-215ENST00000589883 ANKRD31Q8N7Z5 1873 aa25.33■■□□□ 1.65
PTBP1-215ENST00000589883 NFKBIEO00221 500 aa25.32■■□□□ 1.64
PTBP1-215ENST00000589883 TAF7Q15545 349 aaPredicted RBP25.32■■□□□ 1.64
PTBP1-215ENST00000589883 STYK1Q6J9G0 422 aa25.32■■□□□ 1.64
PTBP1-215ENST00000589883 SALL2Q9Y467 1007 aaPredicted RBP25.32■■□□□ 1.64
PTBP1-215ENST00000589883 C21orf2O43822 256 aa25.31■■□□□ 1.64
PTBP1-215ENST00000589883 DNAJC5GQ8N7S2 189 aa25.31■■□□□ 1.64
PTBP1-215ENST00000589883 CCDC88AQ3V6T2 1871 aa25.31■■□□□ 1.64
PTBP1-215ENST00000589883 BCORQ6W2J9 1755 aa25.31■■□□□ 1.64
PTBP1-215ENST00000589883 NBPF5PQ86XG9 351 aaPredicted RBP25.3■■□□□ 1.64
PTBP1-215ENST00000589883 CCDC24Q8N4L8 307 aa25.3■■□□□ 1.64
PTBP1-215ENST00000589883 MASTLQ96GX5 879 aa25.3■■□□□ 1.64
PTBP1-215ENST00000589883 WDR90Q96KV7 1748 aa25.29■■□□□ 1.64
PTBP1-215ENST00000589883 SRGNP10124 158 aa25.28■■□□□ 1.64
PTBP1-215ENST00000589883 PRELPP51888 382 aa25.28■■□□□ 1.64
PTBP1-215ENST00000589883 ERFEQ4G0M1 354 aa25.28■■□□□ 1.64
PTBP1-215ENST00000589883 TAOK3Q9H2K8 898 aa25.28■■□□□ 1.64
PTBP1-215ENST00000589883 ZNF219Q9P2Y4 722 aaPredicted RBP25.28■■□□□ 1.64
PTBP1-215ENST00000589883 LTBP3Q9NS15 1303 aa25.28■■□□□ 1.64
PTBP1-215ENST00000589883 TIAM2Q8IVF5 1701 aa25.27■■□□□ 1.64
PTBP1-215ENST00000589883 PRAMEF22A3QJZ6 481 aa25.27■■□□□ 1.64
PTBP1-215ENST00000589883 PIP4K2AP48426 406 aaPredicted RBP25.27■■□□□ 1.64
PTBP1-215ENST00000589883 TPTE2Q6XPS3 522 aa25.27■■□□□ 1.64
PTBP1-215ENST00000589883 MIS18AQ9NYP9 233 aa25.26■■□□□ 1.63
PTBP1-215ENST00000589883 COL11A2P13942 1736 aaPredicted RBP25.26■■□□□ 1.63
PTBP1-215ENST00000589883 PRPF40BQ6NWY9 871 aaKnown RBP25.25■■□□□ 1.63
PTBP1-215ENST00000589883 KLRG1Q96E93 195 aa25.25■■□□□ 1.63
PTBP1-215ENST00000589883 NIP7Q9Y221 180 aaKnown RBP eCLIP25.25■■□□□ 1.63
PTBP1-215ENST00000589883 FER1L6Q2WGJ9 1857 aa25.25■■□□□ 1.63
PTBP1-215ENST00000589883 DICER1Q9UPY3 1922 aaKnown RBP25.24■■□□□ 1.63
PTBP1-215ENST00000589883 NBPF26B4DH59 902 aa25.23■■□□□ 1.63
PTBP1-215ENST00000589883 NPR1P16066 1061 aa25.23■■□□□ 1.63
PTBP1-215ENST00000589883 NBPF10Q6P3W6 841 aaKnown RBP25.23■■□□□ 1.63
PTBP1-215ENST00000589883 NBPF15Q8N660 670 aa25.23■■□□□ 1.63
PTBP1-215ENST00000589883 LAS1LQ9Y4W2 734 aaKnown RBP25.23■■□□□ 1.63
PTBP1-215ENST00000589883 WWC1Q8IX03 1113 aa25.22■■□□□ 1.63
PTBP1-215ENST00000589883 GTF2E1P29083 439 aaPredicted RBP25.21■■□□□ 1.63
PTBP1-215ENST00000589883 CCDC27Q2M243 656 aa25.21■■□□□ 1.63
PTBP1-215ENST00000589883 SLX4Q8IY92 1834 aa25.21■■□□□ 1.63
PTBP1-215ENST00000589883 ARFGEF2Q9Y6D5 1785 aa25.21■■□□□ 1.63
PTBP1-215ENST00000589883 CCDC93Q567U6 631 aa25.2■■□□□ 1.62
PTBP1-215ENST00000589883 TSPYL4Q9UJ04 414 aa25.2■■□□□ 1.62
PTBP1-215ENST00000589883 KLRG2A4D1S0 409 aaPredicted RBP25.19■■□□□ 1.62
PTBP1-215ENST00000589883 CACNA1SQ13698 1873 aa25.19■■□□□ 1.62
PTBP1-215ENST00000589883 HTRA3P83110 453 aa25.18■■□□□ 1.62
PTBP1-215ENST00000589883 CALD1Q05682 793 aaKnown RBP25.18■■□□□ 1.62
PTBP1-215ENST00000589883 NCBP3Q53F19 620 aaKnown RBP25.18■■□□□ 1.62
PTBP1-215ENST00000589883 JMYQ8N9B5 988 aa25.18■■□□□ 1.62
PTBP1-215ENST00000589883 NYXQ9GZU5 481 aa25.18■■□□□ 1.62
PTBP1-215ENST00000589883 LAMB4A4D0S4 1761 aa25.18■■□□□ 1.62
PTBP1-215ENST00000589883 ERVV-1B6SEH8 477 aa25.17■■□□□ 1.62
PTBP1-215ENST00000589883 ALDH1B1P30837 517 aa25.17■■□□□ 1.62
PTBP1-215ENST00000589883 KIF6Q6ZMV9 814 aa25.17■■□□□ 1.62
PTBP1-215ENST00000589883 RTKN2Q8IZC4 609 aa25.16■■□□□ 1.62
PTBP1-215ENST00000589883 FAM177BA6PVY3 158 aa25.15■■□□□ 1.62
PTBP1-215ENST00000589883 EIF4A1P60842 406 aaKnown RBP25.15■■□□□ 1.62
PTBP1-215ENST00000589883 NGEFQ8N5V2 710 aa25.15■■□□□ 1.62
PTBP1-215ENST00000589883 C7orf43Q8WVR3 580 aa25.15■■□□□ 1.62
PTBP1-215ENST00000589883 IQCA1LA6NCM1 817 aa25.14■■□□□ 1.62
PTBP1-215ENST00000589883 POTECB2RU33 542 aa25.14■■□□□ 1.62
PTBP1-215ENST00000589883 CHL1O00533 1208 aa25.14■■□□□ 1.62
PTBP1-215ENST00000589883 HLFQ16534 295 aa25.14■■□□□ 1.62
PTBP1-215ENST00000589883 CFAP44Q96MT7 982 aa25.14■■□□□ 1.62
PTBP1-215ENST00000589883 KDM3BQ7LBC6 1761 aa25.13■■□□□ 1.61
PTBP1-215ENST00000589883 FKBP4Q02790 459 aaKnown RBP eCLIP25.13■■□□□ 1.61
PTBP1-215ENST00000589883 IFT57Q9NWB7 429 aa25.13■■□□□ 1.61
PTBP1-215ENST00000589883 BABAM1Q9NWV8 329 aa25.13■■□□□ 1.61
PTBP1-215ENST00000589883 MAP3K15Q6ZN16 1313 aa25.12■■□□□ 1.61
PTBP1-215ENST00000589883 GNAI1P63096 354 aa25.12■■□□□ 1.61
PTBP1-215ENST00000589883 ERBB4Q15303 1308 aa25.12■■□□□ 1.61
PTBP1-215ENST00000589883 DDNO94850 711 aaPredicted RBP25.11■■□□□ 1.61
PTBP1-215ENST00000589883 ZNF853P0CG23 659 aa25.11■■□□□ 1.61
PTBP1-215ENST00000589883 HNRNPUQ00839 825 aaKnown RBP eCLIP25.11■■□□□ 1.61
PTBP1-215ENST00000589883 WDR63Q8IWG1 891 aa25.11■■□□□ 1.61
PTBP1-215ENST00000589883 MBIPQ9NS73 344 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms