RNA–Protein interactions for RNA: ENST00000589878.5

LSM14A-207, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 4

Gene LSM14A, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-207ENST00000589878 FOXN1O15353 648 aa24.74■■□□□ 1.55
LSM14A-207ENST00000589878 MASTLQ96GX5 879 aa24.74■■□□□ 1.55
LSM14A-207ENST00000589878 FMNL2Q96PY5 1086 aa24.74■■□□□ 1.55
LSM14A-207ENST00000589878 SIPA1L3O60292 1781 aaPredicted RBP24.73■■□□□ 1.55
LSM14A-207ENST00000589878 PIP4K2AP48426 406 aaPredicted RBP24.73■■□□□ 1.55
LSM14A-207ENST00000589878 KCNQ3O43525 872 aa24.72■■□□□ 1.55
LSM14A-207ENST00000589878 DZIP3Q86Y13 1208 aaKnown RBP24.72■■□□□ 1.55
LSM14A-207ENST00000589878 IQCA1LA6NCM1 817 aa24.71■■□□□ 1.55
LSM14A-207ENST00000589878 SOGA3Q5TF21 947 aa24.71■■□□□ 1.55
LSM14A-207ENST00000589878 GAS2L2Q8NHY3 880 aa24.71■■□□□ 1.55
LSM14A-207ENST00000589878 ARFGEF2Q9Y6D5 1785 aa24.7■■□□□ 1.55
LSM14A-207ENST00000589878 CNTNAP1P78357 1384 aa24.7■■□□□ 1.55
LSM14A-207ENST00000589878 KIF7Q2M1P5 1343 aa24.7■■□□□ 1.54
LSM14A-207ENST00000589878 EAPPQ56P03 285 aaPredicted RBP24.7■■□□□ 1.54
LSM14A-207ENST00000589878 LDHDQ86WU2 507 aa24.7■■□□□ 1.54
LSM14A-207ENST00000589878 TAF1DQ9H5J8 278 aaPredicted RBP24.7■■□□□ 1.54
LSM14A-207ENST00000589878 NBPF5PQ86XG9 351 aaPredicted RBP24.69■■□□□ 1.54
LSM14A-207ENST00000589878 CLEC11AQ9Y240 323 aa24.69■■□□□ 1.54
LSM14A-207ENST00000589878 BCORQ6W2J9 1755 aa24.69■■□□□ 1.54
LSM14A-207ENST00000589878 PASKQ96RG2 1323 aa24.68■■□□□ 1.54
LSM14A-207ENST00000589878 BTBD11A6QL63 1104 aa24.68■■□□□ 1.54
LSM14A-207ENST00000589878 USP16Q9Y5T5 823 aa24.68■■□□□ 1.54
LSM14A-207ENST00000589878 SCN4AP35499 1836 aa24.68■■□□□ 1.54
LSM14A-207ENST00000589878 PER1O15534 1290 aaPredicted RBP24.67■■□□□ 1.54
LSM14A-207ENST00000589878 VEGFBP49765 207 aa24.67■■□□□ 1.54
LSM14A-207ENST00000589878 CCDC93Q567U6 631 aa24.67■■□□□ 1.54
LSM14A-207ENST00000589878 AIDAQ96BJ3 306 aa24.67■■□□□ 1.54
LSM14A-207ENST00000589878 ZNF277Q9NRM2 450 aaPredicted RBP24.67■■□□□ 1.54
LSM14A-207ENST00000589878 PRAMEF22A3QJZ6 481 aa24.66■■□□□ 1.54
LSM14A-207ENST00000589878 TMEM88BA6NKF7 163 aa24.66■■□□□ 1.54
LSM14A-207ENST00000589878 OLFM4Q6UX06 510 aa24.66■■□□□ 1.54
LSM14A-207ENST00000589878 C7orf43Q8WVR3 580 aa24.66■■□□□ 1.54
LSM14A-207ENST00000589878 L3MBTL3Q96JM7 780 aaPredicted RBP24.66■■□□□ 1.54
LSM14A-207ENST00000589878 ZNF541Q9H0D2 1346 aa24.65■■□□□ 1.54
LSM14A-207ENST00000589878 FAM177BA6PVY3 158 aa24.65■■□□□ 1.54
LSM14A-207ENST00000589878 COL3A1P02461 1466 aaPredicted RBP24.64■■□□□ 1.54
LSM14A-207ENST00000589878 ITGBL1O95965 494 aaPredicted RBP24.64■■□□□ 1.54
LSM14A-207ENST00000589878 NPR1P16066 1061 aa24.64■■□□□ 1.54
LSM14A-207ENST00000589878 FKBP4Q02790 459 aaKnown RBP eCLIP24.64■■□□□ 1.54
LSM14A-207ENST00000589878 PRDM10Q9NQV6 1147 aa24.64■■□□□ 1.54
LSM14A-207ENST00000589878 CTCFP49711 727 aaPredicted RBP24.63■■□□□ 1.53
LSM14A-207ENST00000589878 PHACTR3Q96KR7 559 aa24.63■■□□□ 1.53
LSM14A-207ENST00000589878 HACL1Q9UJ83 578 aa24.63■■□□□ 1.53
LSM14A-207ENST00000589878 ZNF652Q9Y2D9 606 aa24.62■■□□□ 1.53
LSM14A-207ENST00000589878 EPHX2P34913 555 aa24.61■■□□□ 1.53
LSM14A-207ENST00000589878 CLEC4GQ6UXB4 293 aa24.61■■□□□ 1.53
LSM14A-207ENST00000589878 CEMIPQ8WUJ3 1361 aa24.61■■□□□ 1.53
LSM14A-207ENST00000589878 PRKAR2BP31323 418 aa24.6■■□□□ 1.53
LSM14A-207ENST00000589878 LBX1P52954 281 aa24.6■■□□□ 1.53
LSM14A-207ENST00000589878 TPTE2Q6XPS3 522 aa24.6■■□□□ 1.53
LSM14A-207ENST00000589878 NIP7Q9Y221 180 aaKnown RBP eCLIP24.6■■□□□ 1.53
LSM14A-207ENST00000589878 MAP1SQ66K74 1059 aaPredicted RBP24.59■■□□□ 1.53
LSM14A-207ENST00000589878 SYNE4Q8N205 404 aa24.59■■□□□ 1.53
LSM14A-207ENST00000589878 CCER1Q8TC90 406 aaPredicted RBP24.59■■□□□ 1.53
LSM14A-207ENST00000589878 RNF123Q5XPI4 1314 aa24.59■■□□□ 1.53
LSM14A-207ENST00000589878 RTKN2Q8IZC4 609 aa24.58■■□□□ 1.53
LSM14A-207ENST00000589878 CNTROBQ8N137 903 aa24.58■■□□□ 1.53
LSM14A-207ENST00000589878 WBP1LQ9NX94 342 aa24.58■■□□□ 1.53
LSM14A-207ENST00000589878 SNRPA1P09661 255 aaKnown RBP24.57■■□□□ 1.52
LSM14A-207ENST00000589878 IARSP41252 1262 aaKnown RBP24.57■■□□□ 1.52
LSM14A-207ENST00000589878 DEFB115Q30KQ5 88 aa24.57■■□□□ 1.52
LSM14A-207ENST00000589878 KLRG2A4D1S0 409 aaPredicted RBP24.56■■□□□ 1.52
LSM14A-207ENST00000589878 MCM10Q7L590 875 aa24.56■■□□□ 1.52
LSM14A-207ENST00000589878 ADAMTSL1Q8N6G6 1762 aa24.55■■□□□ 1.52
LSM14A-207ENST00000589878 NBPF26B4DH59 902 aa24.55■■□□□ 1.52
LSM14A-207ENST00000589878 GTF2E1P29083 439 aaPredicted RBP24.55■■□□□ 1.52
LSM14A-207ENST00000589878 NBPF10Q6P3W6 841 aaKnown RBP24.55■■□□□ 1.52
LSM14A-207ENST00000589878 PNMA8AQ86V59 439 aaPredicted RBP24.55■■□□□ 1.52
LSM14A-207ENST00000589878 NBPF15Q8N660 670 aa24.55■■□□□ 1.52
LSM14A-207ENST00000589878 RSPH6AQ9H0K4 717 aa24.55■■□□□ 1.52
LSM14A-207ENST00000589878 FZD9O00144 591 aa24.54■■□□□ 1.52
LSM14A-207ENST00000589878 ALDH1B1P30837 517 aa24.54■■□□□ 1.52
LSM14A-207ENST00000589878 HLFQ16534 295 aa24.54■■□□□ 1.52
LSM14A-207ENST00000589878 RTF1Q92541 710 aaKnown RBP24.54■■□□□ 1.52
LSM14A-207ENST00000589878 ABT1Q9ULW3 272 aaKnown RBP24.54■■□□□ 1.52
LSM14A-207ENST00000589878 GJA3Q9Y6H8 435 aa24.54■■□□□ 1.52
LSM14A-207ENST00000589878 DCTN1Q14203 1278 aa24.53■■□□□ 1.52
LSM14A-207ENST00000589878 RASSF10A6NK89 507 aa24.52■■□□□ 1.52
LSM14A-207ENST00000589878 GPC2Q8N158 579 aa24.52■■□□□ 1.52
LSM14A-207ENST00000589878 WDR33Q9C0J8 1336 aaKnown RBP24.52■■□□□ 1.52
LSM14A-207ENST00000589878 HSPA8P11142 646 aaKnown RBP24.51■■□□□ 1.51
LSM14A-207ENST00000589878 NGEFQ8N5V2 710 aa24.51■■□□□ 1.51
LSM14A-207ENST00000589878 JDP2Q8WYK2 163 aa24.51■■□□□ 1.51
LSM14A-207ENST00000589878 CFAP53Q96M91 514 aa24.5■■□□□ 1.51
LSM14A-207ENST00000589878 FMR1Q06787 632 aaKnown RBP eCLIP24.49■■□□□ 1.51
LSM14A-207ENST00000589878 NUTM1Q86Y26 1132 aa24.49■■□□□ 1.51
LSM14A-207ENST00000589878 U2AF1L5P0DN76 240 aaPredicted RBP24.48■■□□□ 1.51
LSM14A-207ENST00000589878 EIF6P56537 245 aaKnown RBP24.48■■□□□ 1.51
LSM14A-207ENST00000589878 U2AF1Q01081 240 aaKnown RBP eCLIP24.48■■□□□ 1.51
LSM14A-207ENST00000589878 GRM1Q13255 1194 aa24.48■■□□□ 1.51
LSM14A-207ENST00000589878 PAXIP1Q6ZW49 1069 aaPredicted RBP24.48■■□□□ 1.51
LSM14A-207ENST00000589878 ABHD8Q96I13 439 aa24.48■■□□□ 1.51
LSM14A-207ENST00000589878 MIS18AQ9NYP9 233 aa24.48■■□□□ 1.51
LSM14A-207ENST00000589878 NPC1L1Q9UHC9 1359 aa24.48■■□□□ 1.51
LSM14A-207ENST00000589878 MAP2K1Q02750 393 aaPredicted RBP24.47■■□□□ 1.51
LSM14A-207ENST00000589878 PSMD1Q99460 953 aa24.47■■□□□ 1.51
LSM14A-207ENST00000589878 DDX21Q9NR30 783 aaKnown RBP eCLIP24.47■■□□□ 1.51
LSM14A-207ENST00000589878 NUDCQ9Y266 331 aa24.47■■□□□ 1.51
LSM14A-207ENST00000589878 TCERG1O14776 1098 aaKnown RBP24.46■■□□□ 1.51
LSM14A-207ENST00000589878 LMOD1P29536 600 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms