RNA–Protein interactions for RNA: ENST00000589455.5

LINC01140-209, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-209ENST00000589455 PCGF6Q9BYE7 350 aa21.16■□□□□ 0.98
LINC01140-209ENST00000589455 RGL2O15211 777 aa21.15■□□□□ 0.98
LINC01140-209ENST00000589455 TAF1DQ9H5J8 278 aaPredicted RBP21.15■□□□□ 0.98
LINC01140-209ENST00000589455 KLRG2A4D1S0 409 aaPredicted RBP21.14■□□□□ 0.97
LINC01140-209ENST00000589455 CCDC93Q567U6 631 aa21.14■□□□□ 0.97
LINC01140-209ENST00000589455 DZIP3Q86Y13 1208 aaKnown RBP21.14■□□□□ 0.97
LINC01140-209ENST00000589455 CEMIPQ8WUJ3 1361 aa21.13■□□□□ 0.97
LINC01140-209ENST00000589455 NPR1P16066 1061 aa21.13■□□□□ 0.97
LINC01140-209ENST00000589455 FER1L6Q2WGJ9 1857 aa21.13■□□□□ 0.97
LINC01140-209ENST00000589455 KIF7Q2M1P5 1343 aa21.12■□□□□ 0.97
LINC01140-209ENST00000589455 TMEM88BA6NKF7 163 aa21.12■□□□□ 0.97
LINC01140-209ENST00000589455 BTBD11A6QL63 1104 aa21.12■□□□□ 0.97
LINC01140-209ENST00000589455 FOXN1O15353 648 aa21.12■□□□□ 0.97
LINC01140-209ENST00000589455 ITGBL1O95965 494 aaPredicted RBP21.12■□□□□ 0.97
LINC01140-209ENST00000589455 CTCFP49711 727 aaPredicted RBP21.12■□□□□ 0.97
LINC01140-209ENST00000589455 NBPF5PQ86XG9 351 aaPredicted RBP21.12■□□□□ 0.97
LINC01140-209ENST00000589455 AIDAQ96BJ3 306 aa21.12■□□□□ 0.97
LINC01140-209ENST00000589455 ZNF652Q9Y2D9 606 aa21.12■□□□□ 0.97
LINC01140-209ENST00000589455 ANKRD31Q8N7Z5 1873 aa21.11■□□□□ 0.97
LINC01140-209ENST00000589455 U2SURPO15042 1029 aaKnown RBP21.11■□□□□ 0.97
LINC01140-209ENST00000589455 FKBP4Q02790 459 aaKnown RBP eCLIP21.11■□□□□ 0.97
LINC01140-209ENST00000589455 CC2D1BQ5T0F9 858 aaKnown RBP21.11■□□□□ 0.97
LINC01140-209ENST00000589455 TPTE2Q6XPS3 522 aa21.11■□□□□ 0.97
LINC01140-209ENST00000589455 RTKN2Q8IZC4 609 aa21.11■□□□□ 0.97
LINC01140-209ENST00000589455 SCN7AQ01118 1682 aa21.11■□□□□ 0.97
LINC01140-209ENST00000589455 PNMA8AQ86V59 439 aaPredicted RBP21.1■□□□□ 0.97
LINC01140-209ENST00000589455 NPC1L1Q9UHC9 1359 aa21.1■□□□□ 0.97
LINC01140-209ENST00000589455 DICER1Q9UPY3 1922 aaKnown RBP21.1■□□□□ 0.97
LINC01140-209ENST00000589455 CCDC88AQ3V6T2 1871 aa21.09■□□□□ 0.97
LINC01140-209ENST00000589455 VEGFBP49765 207 aa21.09■□□□□ 0.97
LINC01140-209ENST00000589455 HACL1Q9UJ83 578 aa21.09■□□□□ 0.97
LINC01140-209ENST00000589455 USP16Q9Y5T5 823 aa21.09■□□□□ 0.97
LINC01140-209ENST00000589455 SNRPA1P09661 255 aaKnown RBP21.08■□□□□ 0.97
LINC01140-209ENST00000589455 WBP1LQ9NX94 342 aa21.08■□□□□ 0.97
LINC01140-209ENST00000589455 KCNQ3O43525 872 aa21.07■□□□□ 0.96
LINC01140-209ENST00000589455 ALDH1B1P30837 517 aa21.07■□□□□ 0.96
LINC01140-209ENST00000589455 COL3A1P02461 1466 aaPredicted RBP21.07■□□□□ 0.96
LINC01140-209ENST00000589455 COL11A2P13942 1736 aaPredicted RBP21.07■□□□□ 0.96
LINC01140-209ENST00000589455 FZD9O00144 591 aa21.06■□□□□ 0.96
LINC01140-209ENST00000589455 EPHX2P34913 555 aa21.06■□□□□ 0.96
LINC01140-209ENST00000589455 ZNF277Q9NRM2 450 aaPredicted RBP21.06■□□□□ 0.96
LINC01140-209ENST00000589455 CLEC11AQ9Y240 323 aa21.06■□□□□ 0.96
LINC01140-209ENST00000589455 SLX4Q8IY92 1834 aa21.06■□□□□ 0.96
LINC01140-209ENST00000589455 RASSF10A6NK89 507 aa21.05■□□□□ 0.96
LINC01140-209ENST00000589455 EAPPQ56P03 285 aaPredicted RBP21.05■□□□□ 0.96
LINC01140-209ENST00000589455 PHACTR3Q96KR7 559 aa21.05■□□□□ 0.96
LINC01140-209ENST00000589455 CNTROBQ8N137 903 aa21.04■□□□□ 0.96
LINC01140-209ENST00000589455 GPC2Q8N158 579 aa21.04■□□□□ 0.96
LINC01140-209ENST00000589455 NIP7Q9Y221 180 aaKnown RBP eCLIP21.04■□□□□ 0.96
LINC01140-209ENST00000589455 ZNF541Q9H0D2 1346 aa21.04■□□□□ 0.96
LINC01140-209ENST00000589455 IARSP41252 1262 aaKnown RBP21.03■□□□□ 0.96
LINC01140-209ENST00000589455 DEFB115Q30KQ5 88 aa21.03■□□□□ 0.96
LINC01140-209ENST00000589455 SCN4AP35499 1836 aa21.03■□□□□ 0.96
LINC01140-209ENST00000589455 PRKAR2BP31323 418 aa21.02■□□□□ 0.96
LINC01140-209ENST00000589455 MAP2K1Q02750 393 aaPredicted RBP21.02■□□□□ 0.96
LINC01140-209ENST00000589455 CC2D2BQ6DHV5 1058 aa21.02■□□□□ 0.96
LINC01140-209ENST00000589455 SYNE4Q8N205 404 aa21.02■□□□□ 0.96
LINC01140-209ENST00000589455 PSMD1Q99460 953 aa21.02■□□□□ 0.96
LINC01140-209ENST00000589455 RSPH6AQ9H0K4 717 aa21.02■□□□□ 0.96
LINC01140-209ENST00000589455 VIRMAQ69YN4 1812 aaKnown RBP21.01■□□□□ 0.95
LINC01140-209ENST00000589455 PIP4K2AP48426 406 aaPredicted RBP21.01■□□□□ 0.95
LINC01140-209ENST00000589455 JDP2Q8WYK2 163 aa21.01■□□□□ 0.95
LINC01140-209ENST00000589455 RTF1Q92541 710 aaKnown RBP21.01■□□□□ 0.95
LINC01140-209ENST00000589455 NBPF26B4DH59 902 aa21■□□□□ 0.95
LINC01140-209ENST00000589455 LBX1P52954 281 aa21■□□□□ 0.95
LINC01140-209ENST00000589455 GRIPAP1Q4V328 841 aa21■□□□□ 0.95
LINC01140-209ENST00000589455 NBPF10Q6P3W6 841 aaKnown RBP21■□□□□ 0.95
LINC01140-209ENST00000589455 NBPF15Q8N660 670 aa21■□□□□ 0.95
LINC01140-209ENST00000589455 CFAP53Q96M91 514 aa21■□□□□ 0.95
LINC01140-209ENST00000589455 NUDCQ9Y266 331 aa21■□□□□ 0.95
LINC01140-209ENST00000589455 PRAMEF22A3QJZ6 481 aa20.99■□□□□ 0.95
LINC01140-209ENST00000589455 HTATSF1O43719 755 aaKnown RBP20.99■□□□□ 0.95
LINC01140-209ENST00000589455 GTF2E1P29083 439 aaPredicted RBP20.99■□□□□ 0.95
LINC01140-209ENST00000589455 MAP1SQ66K74 1059 aaPredicted RBP20.99■□□□□ 0.95
LINC01140-209ENST00000589455 SIPA1L3O60292 1781 aaPredicted RBP20.99■□□□□ 0.95
LINC01140-209ENST00000589455 ARFGEF2Q9Y6D5 1785 aa20.99■□□□□ 0.95
LINC01140-209ENST00000589455 RNF123Q5XPI4 1314 aa20.99■□□□□ 0.95
LINC01140-209ENST00000589455 CRY2Q49AN0 593 aa20.98■□□□□ 0.95
LINC01140-209ENST00000589455 OLFM4Q6UX06 510 aa20.98■□□□□ 0.95
LINC01140-209ENST00000589455 NYXQ9GZU5 481 aa20.98■□□□□ 0.95
LINC01140-209ENST00000589455 WDR33Q9C0J8 1336 aaKnown RBP20.98■□□□□ 0.95
LINC01140-209ENST00000589455 BCORQ6W2J9 1755 aa20.96■□□□□ 0.95
LINC01140-209ENST00000589455 HSPA8P11142 646 aaKnown RBP20.96■□□□□ 0.95
LINC01140-209ENST00000589455 EIF6P56537 245 aaKnown RBP20.96■□□□□ 0.95
LINC01140-209ENST00000589455 CCER1Q8TC90 406 aaPredicted RBP20.96■□□□□ 0.95
LINC01140-209ENST00000589455 DDX21Q9NR30 783 aaKnown RBP eCLIP20.96■□□□□ 0.95
LINC01140-209ENST00000589455 ABT1Q9ULW3 272 aaKnown RBP20.96■□□□□ 0.95
LINC01140-209ENST00000589455 ERVV-1B6SEH8 477 aa20.95■□□□□ 0.94
LINC01140-209ENST00000589455 HLFQ16534 295 aa20.95■□□□□ 0.94
LINC01140-209ENST00000589455 MCM10Q7L590 875 aa20.95■□□□□ 0.94
LINC01140-209ENST00000589455 ADAMTSL1Q8N6G6 1762 aa20.95■□□□□ 0.94
LINC01140-209ENST00000589455 SNED1Q8TER0 1413 aa20.95■□□□□ 0.94
LINC01140-209ENST00000589455 FAM177BA6PVY3 158 aa20.94■□□□□ 0.94
LINC01140-209ENST00000589455 LMOD1P29536 600 aaPredicted RBP20.94■□□□□ 0.94
LINC01140-209ENST00000589455 HOXA10P31260 410 aaPredicted RBP20.94■□□□□ 0.94
LINC01140-209ENST00000589455 TAF7Q15545 349 aaPredicted RBP20.94■□□□□ 0.94
LINC01140-209ENST00000589455 ABHD8Q96I13 439 aa20.94■□□□□ 0.94
LINC01140-209ENST00000589455 ECE1P42892 770 aa20.93■□□□□ 0.94
LINC01140-209ENST00000589455 U2AF1L5P0DN76 240 aaPredicted RBP20.92■□□□□ 0.94
LINC01140-209ENST00000589455 U2AF1Q01081 240 aaKnown RBP eCLIP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms