RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 UBTFL1P0CB47 393 aaPredicted RBP15.09■□□□□ 0.01
CCBE1-203ENST00000589116 LINS1Q8NG48 757 aa15.09■□□□□ 0.01
CCBE1-203ENST00000589116 PRIM1P49642 420 aaKnown RBP15.08■□□□□ 0
CCBE1-203ENST00000589116 RGS3P49796 1198 aa15.08■□□□□ 0
CCBE1-203ENST00000589116 AIMP1Q12904 312 aaKnown RBP15.08■□□□□ 0
CCBE1-203ENST00000589116 COPS6Q7L5N1 327 aa15.08■□□□□ 0
CCBE1-203ENST00000589116 RIC3Q7Z5B4 369 aa15.08■□□□□ 0
CCBE1-203ENST00000589116 SKAP1Q86WV1 359 aa15.08■□□□□ 0
CCBE1-203ENST00000589116 HDAC5Q9UQL6 1122 aa15.08■□□□□ 0
CCBE1-203ENST00000589116 TJP1Q07157 1748 aa15.07■□□□□ 0
CCBE1-203ENST00000589116 NUCB1Q02818 461 aa15.07■□□□□ 0
CCBE1-203ENST00000589116 NEXNQ0ZGT2 675 aa15.07■□□□□ 0
CCBE1-203ENST00000589116 SYTL4Q96C24 671 aaPredicted RBP15.07■□□□□ 0
CCBE1-203ENST00000589116 DCTPP1Q9H773 170 aa15.07■□□□□ 0
CCBE1-203ENST00000589116 NUP188Q5SRE5 1749 aa15.07■□□□□ 0
CCBE1-203ENST00000589116 NBPF26B4DH59 902 aa15.06■□□□□ 0
CCBE1-203ENST00000589116 STARD3NLO95772 234 aa15.06■□□□□ 0
CCBE1-203ENST00000589116 NBPF10Q6P3W6 841 aaKnown RBP15.06■□□□□ 0
CCBE1-203ENST00000589116 FAM196AQ6ZSG2 479 aa15.06■□□□□ 0
CCBE1-203ENST00000589116 ANKRD13DQ6ZTN6 518 aa15.06■□□□□ 0
CCBE1-203ENST00000589116 NBPF15Q8N660 670 aa15.06■□□□□ 0
CCBE1-203ENST00000589116 PLBD2Q8NHP8 589 aa15.06■□□□□ 0
CCBE1-203ENST00000589116 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
CCBE1-203ENST00000589116 METTL22Q9BUU2 404 aaPredicted RBP15.06■□□□□ 0
CCBE1-203ENST00000589116 ZNF831Q5JPB2 1677 aa15.05■□□□□ 0
CCBE1-203ENST00000589116 CHD1LQ86WJ1 897 aa15.05■□□□□ -0
CCBE1-203ENST00000589116 RREB1Q92766 1687 aa15.05■□□□□ -0
CCBE1-203ENST00000589116 UTYO14607 1347 aa15.04■□□□□ -0
CCBE1-203ENST00000589116 AFDNP55196 1824 aaKnown RBP15.04■□□□□ -0
CCBE1-203ENST00000589116 ATP8B2P98198 1209 aa15.04■□□□□ -0
CCBE1-203ENST00000589116 DNAJC10Q8IXB1 793 aa15.04■□□□□ -0
CCBE1-203ENST00000589116 LRRFIP2Q9Y608 721 aaKnown RBP15.04■□□□□ -0
CCBE1-203ENST00000589116 NHSQ6T4R5 1651 aa15.04■□□□□ -0
CCBE1-203ENST00000589116 A1BGP04217 495 aa15.03■□□□□ -0
CCBE1-203ENST00000589116 PIP4K2AP48426 406 aaPredicted RBP15.03■□□□□ -0
CCBE1-203ENST00000589116 SMARCC1Q92922 1105 aaPredicted RBP15.03■□□□□ -0
CCBE1-203ENST00000589116 C9orf78Q9NZ63 289 aaPredicted RBP15.03■□□□□ -0
CCBE1-203ENST00000589116 PDE4AP27815 886 aa15.03■□□□□ -0
CCBE1-203ENST00000589116 ACSBG1Q96GR2 724 aa15.03■□□□□ -0
CCBE1-203ENST00000589116 NEURL1BA8MQ27 555 aa15.02□□□□□ -0.01
CCBE1-203ENST00000589116 GRM8O00222 908 aa15.02□□□□□ -0.01
CCBE1-203ENST00000589116 IGKV5-2P06315 115 aa15.02□□□□□ -0.01
CCBE1-203ENST00000589116 NBPF7P0C2Y1 421 aaPredicted RBP15.02□□□□□ -0.01
CCBE1-203ENST00000589116 CWF19L2Q2TBE0 894 aaKnown RBP15.02□□□□□ -0.01
CCBE1-203ENST00000589116 FAM161AQ3B820 660 aa15.02□□□□□ -0.01
CCBE1-203ENST00000589116 ANKRD45Q5TZF3 282 aa15.02□□□□□ -0.01
CCBE1-203ENST00000589116 SLC4A9Q96Q91 983 aa15.02□□□□□ -0.01
CCBE1-203ENST00000589116 MYD88Q99836 296 aa15.02□□□□□ -0.01
CCBE1-203ENST00000589116 BACH2Q9BYV9 841 aa15.02□□□□□ -0.01
CCBE1-203ENST00000589116 RBM19Q9Y4C8 960 aaKnown RBP15.02□□□□□ -0.01
CCBE1-203ENST00000589116 CYP19A1P11511 503 aaPredicted RBP15.01□□□□□ -0.01
CCBE1-203ENST00000589116 SSH3Q8TE77 659 aa15.01□□□□□ -0.01
CCBE1-203ENST00000589116 PALLDQ8WX93 1383 aa15.01□□□□□ -0.01
CCBE1-203ENST00000589116 MTX1Q13505 466 aa15□□□□□ -0.01
CCBE1-203ENST00000589116 LNPKQ9C0E8 428 aa15□□□□□ -0.01
CCBE1-203ENST00000589116 ZBTB47Q9UFB7 747 aaPredicted RBP15□□□□□ -0.01
CCBE1-203ENST00000589116 COL15A1P39059 1388 aa15□□□□□ -0.01
CCBE1-203ENST00000589116 GCKRQ14397 625 aa15□□□□□ -0.01
CCBE1-203ENST00000589116 COL5A3P25940 1745 aaPredicted RBP14.99□□□□□ -0.01
CCBE1-203ENST00000589116 LOC102724428A0A0B4J2F2 783 aa14.99□□□□□ -0.01
CCBE1-203ENST00000589116 PNMA6EA0A0J9YXQ4 647 aa14.99□□□□□ -0.01
CCBE1-203ENST00000589116 SIK1P57059 783 aa14.99□□□□□ -0.01
CCBE1-203ENST00000589116 POLA2Q14181 598 aa14.99□□□□□ -0.01
CCBE1-203ENST00000589116 KIF6Q6ZMV9 814 aa14.99□□□□□ -0.01
CCBE1-203ENST00000589116 TTLL7Q6ZT98 887 aa14.99□□□□□ -0.01
CCBE1-203ENST00000589116 BTAF1O14981 1849 aa14.98□□□□□ -0.01
CCBE1-203ENST00000589116 SBF2Q86WG5 1849 aa14.98□□□□□ -0.01
CCBE1-203ENST00000589116 IL6STP40189 918 aaPredicted RBP14.97□□□□□ -0.01
CCBE1-203ENST00000589116 C8orf34Q49A92 452 aa14.97□□□□□ -0.01
CCBE1-203ENST00000589116 PPP1R42Q7Z4L9 355 aa14.97□□□□□ -0.01
CCBE1-203ENST00000589116 ANKRD36CQ5JPF3 1778 aa14.97□□□□□ -0.01
CCBE1-203ENST00000589116 SRGAP3O43295 1099 aa14.97□□□□□ -0.01
CCBE1-203ENST00000589116 ATP6V1AP38606 617 aa14.97□□□□□ -0.01
CCBE1-203ENST00000589116 CCDC191Q8NCU4 936 aa14.96□□□□□ -0.01
CCBE1-203ENST00000589116 SUCLG2Q96I99 432 aa14.96□□□□□ -0.01
CCBE1-203ENST00000589116 ZBTB1Q9Y2K1 713 aa14.96□□□□□ -0.01
CCBE1-203ENST00000589116 MAP3K15Q6ZN16 1313 aa14.96□□□□□ -0.02
CCBE1-203ENST00000589116 RAB11FIP3O75154 756 aa14.95□□□□□ -0.02
CCBE1-203ENST00000589116 HSP90AB4PQ58FF6 505 aa14.95□□□□□ -0.02
CCBE1-203ENST00000589116 NPM2Q86SE8 214 aaKnown RBP14.95□□□□□ -0.02
CCBE1-203ENST00000589116 ZBTB3Q9H5J0 574 aa14.95□□□□□ -0.02
CCBE1-203ENST00000589116 CCDC87Q9NVE4 849 aa14.95□□□□□ -0.02
CCBE1-203ENST00000589116 CWC25Q9NXE8 425 aaPredicted RBP14.95□□□□□ -0.02
CCBE1-203ENST00000589116 TRIM28Q13263 835 aaKnown RBP14.94□□□□□ -0.02
CCBE1-203ENST00000589116 HSP90AB3PQ58FF7 597 aa14.94□□□□□ -0.02
CCBE1-203ENST00000589116 ISCA1Q9BUE6 129 aa14.94□□□□□ -0.02
CCBE1-203ENST00000589116 LRRCC1Q9C099 1032 aa14.94□□□□□ -0.02
CCBE1-203ENST00000589116 EXOC6BQ9Y2D4 811 aa14.94□□□□□ -0.02
CCBE1-203ENST00000589116 A0A087WZG4 1122 aa14.93□□□□□ -0.02
CCBE1-203ENST00000589116 ERVV-1B6SEH8 477 aa14.93□□□□□ -0.02
CCBE1-203ENST00000589116 ATP5J2-PTCD1G3V325 749 aa14.93□□□□□ -0.02
CCBE1-203ENST00000589116 TCIRG1Q13488 830 aa14.93□□□□□ -0.02
CCBE1-203ENST00000589116 BMP2KLQ5H9B9 411 aa14.93□□□□□ -0.02
CCBE1-203ENST00000589116 GIGYF2Q6Y7W6 1299 aaKnown RBP14.93□□□□□ -0.02
CCBE1-203ENST00000589116 KAZALD1Q96I82 304 aa14.93□□□□□ -0.02
CCBE1-203ENST00000589116 BICC1Q9H694 974 aaKnown RBP14.93□□□□□ -0.02
CCBE1-203ENST00000589116 ZNF330Q9Y3S2 320 aaPredicted RBP14.93□□□□□ -0.02
CCBE1-203ENST00000589116 LY75O60449 1722 aa14.93□□□□□ -0.02
CCBE1-203ENST00000589116 CHD4Q14839 1912 aa14.93□□□□□ -0.02
CCBE1-203ENST00000589116 CRKLP46109 303 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms