RNA–Protein interactions for RNA: ENST00000589049.5

TPGS2-209, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 1 (best) BASIC

Gene TPGS2, Length 1,102 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-209ENST00000589049 CCDC24Q8N4L8 307 aa18.56■□□□□ 0.56
TPGS2-209ENST00000589049 ABHD8Q96I13 439 aa18.56■□□□□ 0.56
TPGS2-209ENST00000589049 ZNF330Q9Y3S2 320 aaPredicted RBP18.56■□□□□ 0.56
TPGS2-209ENST00000589049 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
TPGS2-209ENST00000589049 ADAMTSL1Q8N6G6 1762 aa18.55■□□□□ 0.56
TPGS2-209ENST00000589049 MTHFSDQ2M296 383 aaKnown RBP18.55■□□□□ 0.56
TPGS2-209ENST00000589049 HACL1Q9UJ83 578 aa18.55■□□□□ 0.56
TPGS2-209ENST00000589049 TBC1D2BQ9UPU7 963 aa18.55■□□□□ 0.56
TPGS2-209ENST00000589049 HMOX1P09601 288 aa18.54■□□□□ 0.56
TPGS2-209ENST00000589049 HSPA8P11142 646 aaKnown RBP18.54■□□□□ 0.56
TPGS2-209ENST00000589049 DEFB115Q30KQ5 88 aa18.54■□□□□ 0.56
TPGS2-209ENST00000589049 FAM161AQ3B820 660 aa18.54■□□□□ 0.56
TPGS2-209ENST00000589049 PNMA8AQ86V59 439 aaPredicted RBP18.54■□□□□ 0.56
TPGS2-209ENST00000589049 CLEC11AQ9Y240 323 aa18.54■□□□□ 0.56
TPGS2-209ENST00000589049 KNSTRNQ9Y448 316 aa18.54■□□□□ 0.56
TPGS2-209ENST00000589049 BCORQ6W2J9 1755 aa18.53■□□□□ 0.56
TPGS2-209ENST00000589049 EPHX2P34913 555 aa18.53■□□□□ 0.56
TPGS2-209ENST00000589049 FKBP4Q02790 459 aaKnown RBP eCLIP18.53■□□□□ 0.56
TPGS2-209ENST00000589049 ZNF496Q96IT1 587 aaPredicted RBP18.53■□□□□ 0.56
TPGS2-209ENST00000589049 TEFQ10587 303 aa18.52■□□□□ 0.56
TPGS2-209ENST00000589049 ZNF790Q6PG37 636 aa18.52■□□□□ 0.56
TPGS2-209ENST00000589049 WDR33Q9C0J8 1336 aaKnown RBP18.51■□□□□ 0.55
TPGS2-209ENST00000589049 ZNF541Q9H0D2 1346 aa18.51■□□□□ 0.55
TPGS2-209ENST00000589049 CAMTA2O94983 1202 aa18.51■□□□□ 0.55
TPGS2-209ENST00000589049 C7orf43Q8WVR3 580 aa18.51■□□□□ 0.55
TPGS2-209ENST00000589049 THSD7BQ9C0I4 1608 aa18.5■□□□□ 0.55
TPGS2-209ENST00000589049 NPR1P16066 1061 aa18.5■□□□□ 0.55
TPGS2-209ENST00000589049 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.55
TPGS2-209ENST00000589049 RTKN2Q8IZC4 609 aa18.5■□□□□ 0.55
TPGS2-209ENST00000589049 CNTROBQ8N137 903 aa18.5■□□□□ 0.55
TPGS2-209ENST00000589049 FMNL2Q96PY5 1086 aa18.5■□□□□ 0.55
TPGS2-209ENST00000589049 NBPF5PQ86XG9 351 aaPredicted RBP18.49■□□□□ 0.55
TPGS2-209ENST00000589049 DZIP3Q86Y13 1208 aaKnown RBP18.49■□□□□ 0.55
TPGS2-209ENST00000589049 ZNF277Q9NRM2 450 aaPredicted RBP18.49■□□□□ 0.55
TPGS2-209ENST00000589049 PCDH10Q9P2E7 1040 aa18.49■□□□□ 0.55
TPGS2-209ENST00000589049 ABT1Q9ULW3 272 aaKnown RBP18.49■□□□□ 0.55
TPGS2-209ENST00000589049 SIPA1L3O60292 1781 aaPredicted RBP18.48■□□□□ 0.55
TPGS2-209ENST00000589049 MLLT1Q03111 559 aaPredicted RBP18.48■□□□□ 0.55
TPGS2-209ENST00000589049 CLEC4GQ6UXB4 293 aa18.48■□□□□ 0.55
TPGS2-209ENST00000589049 GPC2Q8N158 579 aa18.48■□□□□ 0.55
TPGS2-209ENST00000589049 BEGAINQ9BUH8 593 aa18.48■□□□□ 0.55
TPGS2-209ENST00000589049 ZNF652Q9Y2D9 606 aa18.48■□□□□ 0.55
TPGS2-209ENST00000589049 RNF123Q5XPI4 1314 aa18.48■□□□□ 0.55
TPGS2-209ENST00000589049 DIAPH1O60610 1272 aaKnown RBP18.47■□□□□ 0.55
TPGS2-209ENST00000589049 MAP1SQ66K74 1059 aaPredicted RBP18.47■□□□□ 0.55
TPGS2-209ENST00000589049 KLRG2A4D1S0 409 aaPredicted RBP18.46■□□□□ 0.55
TPGS2-209ENST00000589049 GNAT3A8MTJ3 354 aa18.46■□□□□ 0.55
TPGS2-209ENST00000589049 FZD9O00144 591 aa18.46■□□□□ 0.55
TPGS2-209ENST00000589049 A1BGP04217 495 aa18.46■□□□□ 0.55
TPGS2-209ENST00000589049 ECE1P42892 770 aa18.46■□□□□ 0.55
TPGS2-209ENST00000589049 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
TPGS2-209ENST00000589049 HSPA5P11021 654 aaKnown RBP18.45■□□□□ 0.54
TPGS2-209ENST00000589049 IARSP41252 1262 aaKnown RBP18.45■□□□□ 0.54
TPGS2-209ENST00000589049 RGS19P49795 217 aa18.45■□□□□ 0.54
TPGS2-209ENST00000589049 DDX21Q9NR30 783 aaKnown RBP eCLIP18.45■□□□□ 0.54
TPGS2-209ENST00000589049 CCDC85CA6NKD9 419 aa18.44■□□□□ 0.54
TPGS2-209ENST00000589049 RGL2O15211 777 aa18.44■□□□□ 0.54
TPGS2-209ENST00000589049 ALDH1B1P30837 517 aa18.44■□□□□ 0.54
TPGS2-209ENST00000589049 AMER1Q5JTC6 1135 aaPredicted RBP18.44■□□□□ 0.54
TPGS2-209ENST00000589049 TPTE2Q6XPS3 522 aa18.44■□□□□ 0.54
TPGS2-209ENST00000589049 IL17REQ8NFR9 667 aa18.44■□□□□ 0.54
TPGS2-209ENST00000589049 JDP2Q8WYK2 163 aa18.44■□□□□ 0.54
TPGS2-209ENST00000589049 LMOD1P29536 600 aaPredicted RBP18.43■□□□□ 0.54
TPGS2-209ENST00000589049 PAXIP1Q6ZW49 1069 aaPredicted RBP18.42■□□□□ 0.54
TPGS2-209ENST00000589049 SYNE4Q8N205 404 aa18.42■□□□□ 0.54
TPGS2-209ENST00000589049 CAPNS2Q96L46 248 aa18.42■□□□□ 0.54
TPGS2-209ENST00000589049 PSMD1Q99460 953 aa18.42■□□□□ 0.54
TPGS2-209ENST00000589049 EIF6P56537 245 aaKnown RBP18.41■□□□□ 0.54
TPGS2-209ENST00000589049 CLSPNQ9HAW4 1339 aa18.41■□□□□ 0.54
TPGS2-209ENST00000589049 CEMIPQ8WUJ3 1361 aa18.41■□□□□ 0.54
TPGS2-209ENST00000589049 BTBD11A6QL63 1104 aa18.4■□□□□ 0.54
TPGS2-209ENST00000589049 CC2D2BQ6DHV5 1058 aa18.4■□□□□ 0.54
TPGS2-209ENST00000589049 GPR101Q96P66 508 aaPredicted RBP18.4■□□□□ 0.54
TPGS2-209ENST00000589049 OLFM4Q6UX06 510 aa18.39■□□□□ 0.53
TPGS2-209ENST00000589049 NIP7Q9Y221 180 aaKnown RBP eCLIP18.39■□□□□ 0.53
TPGS2-209ENST00000589049 SNED1Q8TER0 1413 aa18.39■□□□□ 0.53
TPGS2-209ENST00000589049 CA12O43570 354 aa18.38■□□□□ 0.53
TPGS2-209ENST00000589049 MAP2K2P36507 400 aa18.38■□□□□ 0.53
TPGS2-209ENST00000589049 GRIPAP1Q4V328 841 aa18.38■□□□□ 0.53
TPGS2-209ENST00000589049 CYP4F22Q6NT55 531 aa18.38■□□□□ 0.53
TPGS2-209ENST00000589049 GJA3Q9Y6H8 435 aa18.38■□□□□ 0.53
TPGS2-209ENST00000589049 TRPM7Q96QT4 1865 aa18.37■□□□□ 0.53
TPGS2-209ENST00000589049 GTF2E1P29083 439 aaPredicted RBP18.37■□□□□ 0.53
TPGS2-209ENST00000589049 GRM1Q13255 1194 aa18.37■□□□□ 0.53
TPGS2-209ENST00000589049 USP50Q70EL3 339 aaPredicted RBP18.37■□□□□ 0.53
TPGS2-209ENST00000589049 USP16Q9Y5T5 823 aa18.37■□□□□ 0.53
TPGS2-209ENST00000589049 TLL2Q9Y6L7 1015 aa18.37■□□□□ 0.53
TPGS2-209ENST00000589049 COL3A1P02461 1466 aaPredicted RBP18.37■□□□□ 0.53
TPGS2-209ENST00000589049 LTBP1Q14766 1721 aa18.37■□□□□ 0.53
TPGS2-209ENST00000589049 U2SURPO15042 1029 aaKnown RBP18.36■□□□□ 0.53
TPGS2-209ENST00000589049 SNRPA1P09661 255 aaKnown RBP18.36■□□□□ 0.53
TPGS2-209ENST00000589049 KCNQ3O43525 872 aa18.35■□□□□ 0.53
TPGS2-209ENST00000589049 PIP4K2AP48426 406 aaPredicted RBP18.35■□□□□ 0.53
TPGS2-209ENST00000589049 SCNN1DP51172 638 aa18.35■□□□□ 0.53
TPGS2-209ENST00000589049 CRY2Q49AN0 593 aa18.34■□□□□ 0.53
TPGS2-209ENST00000589049 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
TPGS2-209ENST00000589049 FAM177BA6PVY3 158 aa18.33■□□□□ 0.52
TPGS2-209ENST00000589049 EPS15P42566 896 aa18.33■□□□□ 0.52
TPGS2-209ENST00000589049 CST9Q5W186 159 aa18.33■□□□□ 0.52
TPGS2-209ENST00000589049 LARGE2Q8N3Y3 721 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms