RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 ARFGEF2Q9Y6D5 1785 aa25.57■■□□□ 1.68
DNMT1-216ENST00000588952 FKBP5Q13451 457 aaPredicted RBP25.57■■□□□ 1.68
DNMT1-216ENST00000588952 R3HDM1Q15032 1099 aaKnown RBP25.57■■□□□ 1.68
DNMT1-216ENST00000588952 KIF6Q6ZMV9 814 aa25.57■■□□□ 1.68
DNMT1-216ENST00000588952 BCL2L12Q9HB09 334 aa25.57■■□□□ 1.68
DNMT1-216ENST00000588952 NARFQ9UHQ1 456 aa25.57■■□□□ 1.68
DNMT1-216ENST00000588952 KIF16BQ96L93 1317 aa25.57■■□□□ 1.68
DNMT1-216ENST00000588952 RFC4P35249 363 aa25.56■■□□□ 1.68
DNMT1-216ENST00000588952 HLFQ16534 295 aa25.56■■□□□ 1.68
DNMT1-216ENST00000588952 NPM2Q86SE8 214 aaKnown RBP25.56■■□□□ 1.68
DNMT1-216ENST00000588952 FRAT1Q92837 279 aaPredicted RBP25.56■■□□□ 1.68
DNMT1-216ENST00000588952 CASZ1Q86V15 1759 aa25.55■■□□□ 1.68
DNMT1-216ENST00000588952 F6X3S4 739 aa25.55■■□□□ 1.68
DNMT1-216ENST00000588952 USPL1Q5W0Q7 1092 aa25.55■■□□□ 1.68
DNMT1-216ENST00000588952 ANKRD13DQ6ZTN6 518 aa25.55■■□□□ 1.68
DNMT1-216ENST00000588952 FLAD1Q8NFF5 587 aa25.55■■□□□ 1.68
DNMT1-216ENST00000588952 PLBD2Q8NHP8 589 aa25.55■■□□□ 1.68
DNMT1-216ENST00000588952 PTPRCP08575 1304 aa25.55■■□□□ 1.68
DNMT1-216ENST00000588952 PI4KAP2A4QPH2 592 aa25.54■■□□□ 1.68
DNMT1-216ENST00000588952 PI4KAP1Q8N8J0 262 aa25.54■■□□□ 1.68
DNMT1-216ENST00000588952 PSDA5PKW4 1024 aaPredicted RBP25.53■■□□□ 1.68
DNMT1-216ENST00000588952 MSH5O43196 834 aa25.53■■□□□ 1.68
DNMT1-216ENST00000588952 PLIN1O60240 522 aa25.53■■□□□ 1.68
DNMT1-216ENST00000588952 KSR2Q6VAB6 950 aa25.53■■□□□ 1.68
DNMT1-216ENST00000588952 MAP3K2Q9Y2U5 619 aa25.53■■□□□ 1.68
DNMT1-216ENST00000588952 ERVV-1B6SEH8 477 aa25.52■■□□□ 1.68
DNMT1-216ENST00000588952 ZPR1O75312 459 aa25.52■■□□□ 1.68
DNMT1-216ENST00000588952 DDX58O95786 925 aaKnown RBP25.52■■□□□ 1.68
DNMT1-216ENST00000588952 GYS1P13807 737 aa25.52■■□□□ 1.68
DNMT1-216ENST00000588952 TRIM27P14373 513 aa25.52■■□□□ 1.68
DNMT1-216ENST00000588952 RIC3Q7Z5B4 369 aa25.52■■□□□ 1.68
DNMT1-216ENST00000588952 NUP98P52948 1817 aa25.51■■□□□ 1.67
DNMT1-216ENST00000588952 FKBP8Q14318 412 aa25.5■■□□□ 1.67
DNMT1-216ENST00000588952 ZKSCAN2Q63HK3 967 aa25.5■■□□□ 1.67
DNMT1-216ENST00000588952 ATF7IPQ6VMQ6 1270 aa25.5■■□□□ 1.67
DNMT1-216ENST00000588952 GIGYF2Q6Y7W6 1299 aaKnown RBP25.5■■□□□ 1.67
DNMT1-216ENST00000588952 ARHGAP45Q92619 1136 aa25.5■■□□□ 1.67
DNMT1-216ENST00000588952 CENPBP07199 599 aaPredicted RBP25.49■■□□□ 1.67
DNMT1-216ENST00000588952 DNAAF4Q8WXU2 420 aa25.49■■□□□ 1.67
DNMT1-216ENST00000588952 RRP1P56182 461 aaKnown RBP25.48■■□□□ 1.67
DNMT1-216ENST00000588952 METTL22Q9BUU2 404 aaPredicted RBP25.48■■□□□ 1.67
DNMT1-216ENST00000588952 API5Q9BZZ5 524 aaKnown RBP25.48■■□□□ 1.67
DNMT1-216ENST00000588952 ANKRD36CQ5JPF3 1778 aa25.48■■□□□ 1.67
DNMT1-216ENST00000588952 ABCC4O15439 1325 aa25.47■■□□□ 1.67
DNMT1-216ENST00000588952 RNF123Q5XPI4 1314 aa25.47■■□□□ 1.67
DNMT1-216ENST00000588952 IPO8O15397 1037 aaKnown RBP25.47■■□□□ 1.67
DNMT1-216ENST00000588952 TBC1D9BQ66K14 1250 aa25.47■■□□□ 1.67
DNMT1-216ENST00000588952 MSL1Q68DK7 614 aa25.47■■□□□ 1.67
DNMT1-216ENST00000588952 MYD88Q99836 296 aa25.47■■□□□ 1.67
DNMT1-216ENST00000588952 SUPT16HQ9Y5B9 1047 aaKnown RBP25.47■■□□□ 1.67
DNMT1-216ENST00000588952 ATP10DQ9P241 1426 aa25.46■■□□□ 1.67
DNMT1-216ENST00000588952 RGL2O15211 777 aa25.46■■□□□ 1.67
DNMT1-216ENST00000588952 RLBP1P12271 317 aa25.46■■□□□ 1.67
DNMT1-216ENST00000588952 TCIRG1Q13488 830 aa25.46■■□□□ 1.67
DNMT1-216ENST00000588952 CLEC4GQ6UXB4 293 aa25.46■■□□□ 1.67
DNMT1-216ENST00000588952 CLUAP1Q96AJ1 413 aa25.46■■□□□ 1.67
DNMT1-216ENST00000588952 ATP5J2-PTCD1G3V325 749 aa25.45■■□□□ 1.66
DNMT1-216ENST00000588952 IGKV5-2P06315 115 aa25.45■■□□□ 1.66
DNMT1-216ENST00000588952 C20orf194Q5TEA3 1177 aa25.45■■□□□ 1.66
DNMT1-216ENST00000588952 SLC4A10Q6U841 1118 aa25.45■■□□□ 1.66
DNMT1-216ENST00000588952 ZNF652Q9Y2D9 606 aa25.45■■□□□ 1.66
DNMT1-216ENST00000588952 PXDNLA1KZ92 1463 aa25.45■■□□□ 1.66
DNMT1-216ENST00000588952 N4BP2Q86UW6 1770 aaPredicted RBP25.44■■□□□ 1.66
DNMT1-216ENST00000588952 UBN2Q6ZU65 1347 aa25.44■■□□□ 1.66
DNMT1-216ENST00000588952 GPTP24298 496 aa25.44■■□□□ 1.66
DNMT1-216ENST00000588952 BEND3Q5T5X7 828 aa25.44■■□□□ 1.66
DNMT1-216ENST00000588952 ZNF34Q8IZ26 560 aa25.44■■□□□ 1.66
DNMT1-216ENST00000588952 ISCA1Q9BUE6 129 aa25.44■■□□□ 1.66
DNMT1-216ENST00000588952 NFIXQ14938 502 aa25.43■■□□□ 1.66
DNMT1-216ENST00000588952 BICDL1Q6ZP65 573 aa25.43■■□□□ 1.66
DNMT1-216ENST00000588952 PANK1Q8TE04 598 aa25.43■■□□□ 1.66
DNMT1-216ENST00000588952 COL24A1Q17RW2 1714 aa25.43■■□□□ 1.66
DNMT1-216ENST00000588952 ZBTB7AO95365 584 aa25.42■■□□□ 1.66
DNMT1-216ENST00000588952 CWF19L2Q2TBE0 894 aaKnown RBP25.42■■□□□ 1.66
DNMT1-216ENST00000588952 TM4SF1P30408 202 aa25.41■■□□□ 1.66
DNMT1-216ENST00000588952 HSP90AB3PQ58FF7 597 aa25.41■■□□□ 1.66
DNMT1-216ENST00000588952 DZIP1LQ8IYY4 767 aaKnown RBP25.41■■□□□ 1.66
DNMT1-216ENST00000588952 SLC16A10Q8TF71 515 aa25.41■■□□□ 1.66
DNMT1-216ENST00000588952 NIP7Q9Y221 180 aaKnown RBP eCLIP25.41■■□□□ 1.66
DNMT1-216ENST00000588952 AFDNP55196 1824 aaKnown RBP25.41■■□□□ 1.66
DNMT1-216ENST00000588952 NEURL1BA8MQ27 555 aa25.4■■□□□ 1.66
DNMT1-216ENST00000588952 DDR1Q08345 913 aa25.4■■□□□ 1.66
DNMT1-216ENST00000588952 NLRP10Q86W26 655 aa25.4■■□□□ 1.66
DNMT1-216ENST00000588952 TMEM57Q8N5G2 664 aa25.4■■□□□ 1.66
DNMT1-216ENST00000588952 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.4■■□□□ 1.66
DNMT1-216ENST00000588952 NLGN1Q8N2Q7 840 aa25.39■■□□□ 1.66
DNMT1-216ENST00000588952 LINS1Q8NG48 757 aa25.39■■□□□ 1.66
DNMT1-216ENST00000588952 NEXNQ0ZGT2 675 aa25.38■■□□□ 1.65
DNMT1-216ENST00000588952 TRIM28Q13263 835 aaKnown RBP25.38■■□□□ 1.65
DNMT1-216ENST00000588952 INTS3Q68E01 1043 aaKnown RBP25.38■■□□□ 1.65
DNMT1-216ENST00000588952 FTSJ3Q8IY81 847 aaKnown RBP25.38■■□□□ 1.65
DNMT1-216ENST00000588952 MMP10P09238 476 aa25.37■■□□□ 1.65
DNMT1-216ENST00000588952 SUSD4Q5VX71 490 aa25.37■■□□□ 1.65
DNMT1-216ENST00000588952 SETDB2Q96T68 719 aa25.37■■□□□ 1.65
DNMT1-216ENST00000588952 SRCIN1Q9C0H9 1055 aa25.37■■□□□ 1.65
DNMT1-216ENST00000588952 ATF5Q9Y2D1 282 aaPredicted RBP25.37■■□□□ 1.65
DNMT1-216ENST00000588952 FAM177BA6PVY3 158 aa25.36■■□□□ 1.65
DNMT1-216ENST00000588952 POLRMTO00411 1230 aaKnown RBP25.36■■□□□ 1.65
DNMT1-216ENST00000588952 MTFR1LQ9H019 292 aa25.36■■□□□ 1.65
DNMT1-216ENST00000588952 CARMIL3Q8ND23 1372 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms