RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 ZNF652Q9Y2D9 606 aa21.16■□□□□ 0.98
ERCC1-206ENST00000588300 ARFGEF2Q9Y6D5 1785 aa21.15■□□□□ 0.98
ERCC1-206ENST00000588300 TAF7Q15545 349 aaPredicted RBP21.15■□□□□ 0.98
ERCC1-206ENST00000588300 DICER1Q9UPY3 1922 aaKnown RBP21.14■□□□□ 0.98
ERCC1-206ENST00000588300 GLTPD2A6NH11 291 aa21.14■□□□□ 0.97
ERCC1-206ENST00000588300 C21orf2O43822 256 aa21.14■□□□□ 0.97
ERCC1-206ENST00000588300 KDM3BQ7LBC6 1761 aa21.13■□□□□ 0.97
ERCC1-206ENST00000588300 STYK1Q6J9G0 422 aa21.13■□□□□ 0.97
ERCC1-206ENST00000588300 CNKSR1Q969H4 720 aa21.13■□□□□ 0.97
ERCC1-206ENST00000588300 ZNF219Q9P2Y4 722 aaPredicted RBP21.13■□□□□ 0.97
ERCC1-206ENST00000588300 RGL2O15211 777 aa21.12■□□□□ 0.97
ERCC1-206ENST00000588300 NBPF5PQ86XG9 351 aaPredicted RBP21.12■□□□□ 0.97
ERCC1-206ENST00000588300 SLX4Q8IY92 1834 aa21.12■□□□□ 0.97
ERCC1-206ENST00000588300 NBPF26B4DH59 902 aa21.11■□□□□ 0.97
ERCC1-206ENST00000588300 SRGNP10124 158 aa21.11■□□□□ 0.97
ERCC1-206ENST00000588300 VEGFAP15692 232 aaPredicted RBP21.11■□□□□ 0.97
ERCC1-206ENST00000588300 NBPF10Q6P3W6 841 aaKnown RBP21.11■□□□□ 0.97
ERCC1-206ENST00000588300 NBPF15Q8N660 670 aa21.11■□□□□ 0.97
ERCC1-206ENST00000588300 DNAJC5GQ8N7S2 189 aa21.11■□□□□ 0.97
ERCC1-206ENST00000588300 SMC1BQ8NDV3 1235 aa21.11■□□□□ 0.97
ERCC1-206ENST00000588300 PNISRQ8TF01 805 aaKnown RBP21.11■□□□□ 0.97
ERCC1-206ENST00000588300 MASTLQ96GX5 879 aa21.11■□□□□ 0.97
ERCC1-206ENST00000588300 MIS18AQ9NYP9 233 aa21.1■□□□□ 0.97
ERCC1-206ENST00000588300 LTBP3Q9NS15 1303 aa21.09■□□□□ 0.97
ERCC1-206ENST00000588300 SOGA3Q5TF21 947 aa21.09■□□□□ 0.97
ERCC1-206ENST00000588300 DPY19L2Q6NUT2 758 aa21.09■□□□□ 0.97
ERCC1-206ENST00000588300 PRPF40BQ6NWY9 871 aaKnown RBP21.09■□□□□ 0.97
ERCC1-206ENST00000588300 TAOK3Q9H2K8 898 aa21.09■□□□□ 0.97
ERCC1-206ENST00000588300 NIP7Q9Y221 180 aaKnown RBP eCLIP21.09■□□□□ 0.97
ERCC1-206ENST00000588300 NFE2L2Q16236 605 aa21.08■□□□□ 0.97
ERCC1-206ENST00000588300 ERFEQ4G0M1 354 aa21.08■□□□□ 0.97
ERCC1-206ENST00000588300 IFFO2Q5TF58 517 aa21.08■□□□□ 0.97
ERCC1-206ENST00000588300 TPTE2Q6XPS3 522 aa21.08■□□□□ 0.97
ERCC1-206ENST00000588300 PLEKHF1Q96S99 279 aa21.08■□□□□ 0.97
ERCC1-206ENST00000588300 PNNQ9H307 717 aaKnown RBP21.08■□□□□ 0.97
ERCC1-206ENST00000588300 MAPK8IP3Q9UPT6 1336 aa21.07■□□□□ 0.96
ERCC1-206ENST00000588300 NPR1P16066 1061 aa21.06■□□□□ 0.96
ERCC1-206ENST00000588300 HTRA3P83110 453 aa21.05■□□□□ 0.96
ERCC1-206ENST00000588300 KLRG2A4D1S0 409 aaPredicted RBP21.04■□□□□ 0.96
ERCC1-206ENST00000588300 FAM177BA6PVY3 158 aa21.04■□□□□ 0.96
ERCC1-206ENST00000588300 EIF4A1P60842 406 aaKnown RBP21.04■□□□□ 0.96
ERCC1-206ENST00000588300 HLFQ16534 295 aa21.04■□□□□ 0.96
ERCC1-206ENST00000588300 KLRG1Q96E93 195 aa21.04■□□□□ 0.96
ERCC1-206ENST00000588300 NUP98P52948 1817 aa21.04■□□□□ 0.96
ERCC1-206ENST00000588300 CCDC93Q567U6 631 aa21.03■□□□□ 0.96
ERCC1-206ENST00000588300 THUMPD2Q9BTF0 503 aaKnown RBP21.03■□□□□ 0.96
ERCC1-206ENST00000588300 GTF2E1P29083 439 aaPredicted RBP21.02■□□□□ 0.96
ERCC1-206ENST00000588300 NGEFQ8N5V2 710 aa21.02■□□□□ 0.96
ERCC1-206ENST00000588300 POTECB2RU33 542 aa21.01■□□□□ 0.95
ERCC1-206ENST00000588300 ERVV-1B6SEH8 477 aa21.01■□□□□ 0.95
ERCC1-206ENST00000588300 KIF6Q6ZMV9 814 aa21.01■□□□□ 0.95
ERCC1-206ENST00000588300 C7orf43Q8WVR3 580 aa21.01■□□□□ 0.95
ERCC1-206ENST00000588300 RRP7AQ9Y3A4 280 aaKnown RBP21.01■□□□□ 0.95
ERCC1-206ENST00000588300 NYXQ9GZU5 481 aa21■□□□□ 0.95
ERCC1-206ENST00000588300 MAP3K15Q6ZN16 1313 aa21■□□□□ 0.95
ERCC1-206ENST00000588300 ALDH1B1P30837 517 aa20.99■□□□□ 0.95
ERCC1-206ENST00000588300 RALBP1Q15311 655 aa20.99■□□□□ 0.95
ERCC1-206ENST00000588300 MYL6BP14649 208 aa20.98■□□□□ 0.95
ERCC1-206ENST00000588300 FKBP4Q02790 459 aaKnown RBP eCLIP20.98■□□□□ 0.95
ERCC1-206ENST00000588300 TTLL7Q6ZT98 887 aa20.98■□□□□ 0.95
ERCC1-206ENST00000588300 JMYQ8N9B5 988 aa20.98■□□□□ 0.95
ERCC1-206ENST00000588300 ERBB4Q15303 1308 aa20.98■□□□□ 0.95
ERCC1-206ENST00000588300 DDNO94850 711 aaPredicted RBP20.97■□□□□ 0.95
ERCC1-206ENST00000588300 TSPYL4Q9UJ04 414 aa20.97■□□□□ 0.95
ERCC1-206ENST00000588300 ABCC12Q96J65 1359 aa20.97■□□□□ 0.95
ERCC1-206ENST00000588300 IBTKQ9P2D0 1353 aaPredicted RBP20.97■□□□□ 0.95
ERCC1-206ENST00000588300 RTKN2Q8IZC4 609 aa20.96■□□□□ 0.95
ERCC1-206ENST00000588300 RIC1Q4ADV7 1423 aa20.95■□□□□ 0.95
ERCC1-206ENST00000588300 SCN4AP35499 1836 aa20.95■□□□□ 0.94
ERCC1-206ENST00000588300 RIPK4P57078 832 aa20.95■□□□□ 0.94
ERCC1-206ENST00000588300 NUTM1Q86Y26 1132 aa20.95■□□□□ 0.94
ERCC1-206ENST00000588300 ZBTB3Q9H5J0 574 aa20.95■□□□□ 0.94
ERCC1-206ENST00000588300 GPTP24298 496 aa20.94■□□□□ 0.94
ERCC1-206ENST00000588300 LMOD3Q0VAK6 560 aa20.94■□□□□ 0.94
ERCC1-206ENST00000588300 CRY2Q49AN0 593 aa20.94■□□□□ 0.94
ERCC1-206ENST00000588300 OLFM4Q6UX06 510 aa20.94■□□□□ 0.94
ERCC1-206ENST00000588300 ZNF277Q9NRM2 450 aaPredicted RBP20.94■□□□□ 0.94
ERCC1-206ENST00000588300 IQCA1LA6NCM1 817 aa20.93■□□□□ 0.94
ERCC1-206ENST00000588300 CHADLQ6NUI6 762 aa20.93■□□□□ 0.94
ERCC1-206ENST00000588300 BABAM1Q9NWV8 329 aa20.93■□□□□ 0.94
ERCC1-206ENST00000588300 UBN2Q6ZU65 1347 aa20.93■□□□□ 0.94
ERCC1-206ENST00000588300 GIGYF2Q6Y7W6 1299 aaKnown RBP20.92■□□□□ 0.94
ERCC1-206ENST00000588300 ZNF34Q8IZ26 560 aa20.92■□□□□ 0.94
ERCC1-206ENST00000588300 RPGRQ92834 1020 aaKnown RBP20.92■□□□□ 0.94
ERCC1-206ENST00000588300 L3MBTL3Q96JM7 780 aaPredicted RBP20.92■□□□□ 0.94
ERCC1-206ENST00000588300 TMPOP42166 694 aaKnown RBP20.91■□□□□ 0.94
ERCC1-206ENST00000588300 SUSD4Q5VX71 490 aa20.91■□□□□ 0.94
ERCC1-206ENST00000588300 MYBBP1AQ9BQG0 1328 aaKnown RBP20.9■□□□□ 0.94
ERCC1-206ENST00000588300 EIF2S2P20042 333 aaKnown RBP20.9■□□□□ 0.94
ERCC1-206ENST00000588300 IARSP41252 1262 aaKnown RBP20.9■□□□□ 0.94
ERCC1-206ENST00000588300 CC2D2BQ6DHV5 1058 aa20.9■□□□□ 0.94
ERCC1-206ENST00000588300 SYNE4Q8N205 404 aa20.9■□□□□ 0.94
ERCC1-206ENST00000588300 SNED1Q8TER0 1413 aa20.89■□□□□ 0.94
ERCC1-206ENST00000588300 ZNF541Q9H0D2 1346 aa20.89■□□□□ 0.93
ERCC1-206ENST00000588300 NTSR2O95665 410 aa20.89■□□□□ 0.93
ERCC1-206ENST00000588300 POTEIP0CG38 1075 aa20.89■□□□□ 0.93
ERCC1-206ENST00000588300 POTEJP0CG39 1038 aa20.89■□□□□ 0.93
ERCC1-206ENST00000588300 HOXA10P31260 410 aaPredicted RBP20.89■□□□□ 0.93
ERCC1-206ENST00000588300 PARP10Q53GL7 1025 aa20.89■□□□□ 0.93
ERCC1-206ENST00000588300 PPP1R42Q7Z4L9 355 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms