RNA–Protein interactions for RNA: ENST00000588183.5

HDHD2-205, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

TSL 1 (best)

Gene HDHD2, Length 2,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-205ENST00000588183 SHANK3Q9BYB0 1731 aa20.44■□□□□ 0.86
HDHD2-205ENST00000588183 NEURL1BA8MQ27 555 aa20.43■□□□□ 0.86
HDHD2-205ENST00000588183 METTL22Q9BUU2 404 aaPredicted RBP20.42■□□□□ 0.86
HDHD2-205ENST00000588183 MCM4P33991 863 aa20.42■□□□□ 0.86
HDHD2-205ENST00000588183 ARFGEF2Q9Y6D5 1785 aa20.41■□□□□ 0.86
HDHD2-205ENST00000588183 NEXNQ0ZGT2 675 aa20.41■□□□□ 0.86
HDHD2-205ENST00000588183 CARD10Q9BWT7 1032 aa20.41■□□□□ 0.86
HDHD2-205ENST00000588183 HDAC5Q9UQL6 1122 aa20.41■□□□□ 0.86
HDHD2-205ENST00000588183 AFDNP55196 1824 aaKnown RBP20.41■□□□□ 0.86
HDHD2-205ENST00000588183 IL25Q9H293 177 aa20.41■□□□□ 0.86
HDHD2-205ENST00000588183 IL2RBP14784 551 aa20.4■□□□□ 0.86
HDHD2-205ENST00000588183 GCKRQ14397 625 aa20.4■□□□□ 0.86
HDHD2-205ENST00000588183 ANKRD13DQ6ZTN6 518 aa20.4■□□□□ 0.86
HDHD2-205ENST00000588183 ANO2Q9NQ90 1003 aa20.4■□□□□ 0.86
HDHD2-205ENST00000588183 CIZ1Q9ULV3 898 aaPredicted RBP20.4■□□□□ 0.86
HDHD2-205ENST00000588183 UBR2Q8IWV8 1755 aa20.4■□□□□ 0.86
HDHD2-205ENST00000588183 JARID2Q92833 1246 aaPredicted RBP20.39■□□□□ 0.86
HDHD2-205ENST00000588183 USP42Q9H9J4 1324 aaKnown RBP20.39■□□□□ 0.85
HDHD2-205ENST00000588183 DDX54Q8TDD1 881 aaKnown RBP20.39■□□□□ 0.85
HDHD2-205ENST00000588183 PAPPAQ13219 1627 aa20.39■□□□□ 0.85
HDHD2-205ENST00000588183 EPHA10Q5JZY3 1008 aa20.38■□□□□ 0.85
HDHD2-205ENST00000588183 PALD1Q9ULE6 856 aa20.38■□□□□ 0.85
HDHD2-205ENST00000588183 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.38■□□□□ 0.85
HDHD2-205ENST00000588183 EVA1CP58658 441 aa20.38■□□□□ 0.85
HDHD2-205ENST00000588183 CLASRPQ8N2M8 674 aaKnown RBP20.38■□□□□ 0.85
HDHD2-205ENST00000588183 TNPO1Q92973 898 aaKnown RBP20.38■□□□□ 0.85
HDHD2-205ENST00000588183 KCPQ6ZWJ8 1503 aa20.38■□□□□ 0.85
HDHD2-205ENST00000588183 ERC1Q8IUD2 1116 aa20.37■□□□□ 0.85
HDHD2-205ENST00000588183 RAB3GAP1Q15042 981 aa20.37■□□□□ 0.85
HDHD2-205ENST00000588183 TTC41PQ6P2S7 1318 aa20.36■□□□□ 0.85
HDHD2-205ENST00000588183 NBPF26B4DH59 902 aa20.36■□□□□ 0.85
HDHD2-205ENST00000588183 ERVV-2B6SEH9 535 aa20.36■□□□□ 0.85
HDHD2-205ENST00000588183 ST18O60284 1047 aa20.36■□□□□ 0.85
HDHD2-205ENST00000588183 SASH1O94885 1247 aa20.36■□□□□ 0.85
HDHD2-205ENST00000588183 NBPF14Q5TI25 921 aa20.36■□□□□ 0.85
HDHD2-205ENST00000588183 NBPF10Q6P3W6 841 aaKnown RBP20.36■□□□□ 0.85
HDHD2-205ENST00000588183 NBPF15Q8N660 670 aa20.36■□□□□ 0.85
HDHD2-205ENST00000588183 KLHDC4Q8TBB5 520 aa20.36■□□□□ 0.85
HDHD2-205ENST00000588183 TOGARAM1Q9Y4F4 1720 aa20.36■□□□□ 0.85
HDHD2-205ENST00000588183 ATP5J2-PTCD1G3V325 749 aa20.35■□□□□ 0.85
HDHD2-205ENST00000588183 PTCD1O75127 700 aaKnown RBP20.35■□□□□ 0.85
HDHD2-205ENST00000588183 NKX1-1Q15270 411 aaPredicted RBP20.35■□□□□ 0.85
HDHD2-205ENST00000588183 CNTROBQ8N137 903 aa20.35■□□□□ 0.85
HDHD2-205ENST00000588183 SIL1Q9H173 461 aa20.35■□□□□ 0.85
HDHD2-205ENST00000588183 AACSQ86V21 672 aa20.35■□□□□ 0.85
HDHD2-205ENST00000588183 GLRX3O76003 335 aaKnown RBP20.34■□□□□ 0.85
HDHD2-205ENST00000588183 IFIT2P09913 472 aaKnown RBP20.34■□□□□ 0.85
HDHD2-205ENST00000588183 MCCP23508 829 aa20.34■□□□□ 0.85
HDHD2-205ENST00000588183 G3BP1Q13283 466 aaKnown RBP eCLIP20.34■□□□□ 0.85
HDHD2-205ENST00000588183 ECHDC1Q9NTX5 307 aa20.33■□□□□ 0.85
HDHD2-205ENST00000588183 SSFA2P28290 1259 aa20.33■□□□□ 0.84
HDHD2-205ENST00000588183 UBE3BQ7Z3V4 1068 aa20.33■□□□□ 0.84
HDHD2-205ENST00000588183 PLBD2Q8NHP8 589 aa20.33■□□□□ 0.84
HDHD2-205ENST00000588183 EAF2Q96CJ1 260 aaPredicted RBP20.32■□□□□ 0.84
HDHD2-205ENST00000588183 NUP188Q5SRE5 1749 aa20.32■□□□□ 0.84
HDHD2-205ENST00000588183 SGSM2O43147 1006 aa20.31■□□□□ 0.84
HDHD2-205ENST00000588183 A1BGP04217 495 aa20.31■□□□□ 0.84
HDHD2-205ENST00000588183 NEK4P51957 841 aa20.31■□□□□ 0.84
HDHD2-205ENST00000588183 TTLL7Q6ZT98 887 aa20.31■□□□□ 0.84
HDHD2-205ENST00000588183 CCDC8Q9H0W5 538 aaPredicted RBP20.31■□□□□ 0.84
HDHD2-205ENST00000588183 TLR7Q9NYK1 1049 aaKnown RBP20.31■□□□□ 0.84
HDHD2-205ENST00000588183 TNS2Q63HR2 1409 aa20.31■□□□□ 0.84
HDHD2-205ENST00000588183 ERBB4Q15303 1308 aa20.31■□□□□ 0.84
HDHD2-205ENST00000588183 GPATCH3Q96I76 525 aa20.31■□□□□ 0.84
HDHD2-205ENST00000588183 BTG4Q9NY30 223 aa20.3■□□□□ 0.84
HDHD2-205ENST00000588183 A0A087WZG4 1122 aa20.3■□□□□ 0.84
HDHD2-205ENST00000588183 DDX11L8A8MPP1 907 aa20.3■□□□□ 0.84
HDHD2-205ENST00000588183 ANAPC15P60006 121 aa20.3■□□□□ 0.84
HDHD2-205ENST00000588183 CWC27Q6UX04 472 aaKnown RBP20.3■□□□□ 0.84
HDHD2-205ENST00000588183 ZGPATQ8N5A5 531 aaKnown RBP20.29■□□□□ 0.84
HDHD2-205ENST00000588183 TRAK2O60296 914 aa20.29■□□□□ 0.84
HDHD2-205ENST00000588183 RFX5P48382 616 aaPredicted RBP20.29■□□□□ 0.84
HDHD2-205ENST00000588183 CASP7P55210 303 aa20.29■□□□□ 0.84
HDHD2-205ENST00000588183 RAD50Q92878 1312 aa20.28■□□□□ 0.84
HDHD2-205ENST00000588183 GBP4Q96PP9 640 aa20.28■□□□□ 0.84
HDHD2-205ENST00000588183 LSG1Q9H089 658 aaKnown RBP20.28■□□□□ 0.84
HDHD2-205ENST00000588183 TJP1Q07157 1748 aa20.28■□□□□ 0.84
HDHD2-205ENST00000588183 HSPA4P34932 840 aa20.27■□□□□ 0.84
HDHD2-205ENST00000588183 RABL6Q3YEC7 729 aaPredicted RBP20.27■□□□□ 0.84
HDHD2-205ENST00000588183 DIAPH3Q9NSV4 1193 aa20.27■□□□□ 0.84
HDHD2-205ENST00000588183 COL15A1P39059 1388 aa20.27■□□□□ 0.83
HDHD2-205ENST00000588183 ROBO1Q9Y6N7 1651 aa20.27■□□□□ 0.83
HDHD2-205ENST00000588183 PTPN12Q05209 780 aaKnown RBP20.26■□□□□ 0.83
HDHD2-205ENST00000588183 IL17RAQ96F46 866 aa20.26■□□□□ 0.83
HDHD2-205ENST00000588183 ZBTB3Q9H5J0 574 aa20.26■□□□□ 0.83
HDHD2-205ENST00000588183 COPRSQ9NQ92 184 aa20.26■□□□□ 0.83
HDHD2-205ENST00000588183 TMOD3Q9NYL9 352 aa20.26■□□□□ 0.83
HDHD2-205ENST00000588183 NOL8Q76FK4 1167 aaKnown RBP20.26■□□□□ 0.83
HDHD2-205ENST00000588183 UPF3BQ9BZI7 483 aaKnown RBP20.26■□□□□ 0.83
HDHD2-205ENST00000588183 GZF1Q9H116 711 aaPredicted RBP20.26■□□□□ 0.83
HDHD2-205ENST00000588183 EPB41L2O43491 1005 aaKnown RBP20.25■□□□□ 0.83
HDHD2-205ENST00000588183 PKP1Q13835 747 aa20.25■□□□□ 0.83
HDHD2-205ENST00000588183 TMX3Q96JJ7 454 aa20.25■□□□□ 0.83
HDHD2-205ENST00000588183 EVI5LQ96CN4 794 aa20.25■□□□□ 0.83
HDHD2-205ENST00000588183 COL14A1Q05707 1796 aaKnown RBP20.24■□□□□ 0.83
HDHD2-205ENST00000588183 BOLA2Q9H3K6 86 aa20.23■□□□□ 0.83
HDHD2-205ENST00000588183 COL16A1Q07092 1604 aaPredicted RBP20.23■□□□□ 0.83
HDHD2-205ENST00000588183 H7C1W4 665 aa20.23■□□□□ 0.83
HDHD2-205ENST00000588183 TFCP2Q12800 502 aa20.23■□□□□ 0.83
HDHD2-205ENST00000588183 LMBR1LQ6UX01 489 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms