RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 FBLN1P23142 703 aa12.1□□□□□ -0.47
ZNF540-203ENST00000586134 KIAA2012Q0VF49 1180 aa12.1□□□□□ -0.47
ZNF540-203ENST00000586134 PROM2Q8N271 834 aa12.1□□□□□ -0.47
ZNF540-203ENST00000586134 ZCRB1Q8TBF4 217 aaKnown RBP12.1□□□□□ -0.47
ZNF540-203ENST00000586134 LTV1Q96GA3 475 aaPredicted RBP12.1□□□□□ -0.47
ZNF540-203ENST00000586134 MAPK8IP3Q9UPT6 1336 aa12.09□□□□□ -0.47
ZNF540-203ENST00000586134 HMGB2P26583 209 aaKnown RBP12.09□□□□□ -0.47
ZNF540-203ENST00000586134 TXNRD1Q16881 649 aa12.09□□□□□ -0.47
ZNF540-203ENST00000586134 HSP90AB2PQ58FF8 381 aa12.09□□□□□ -0.47
ZNF540-203ENST00000586134 PTF1AQ7RTS3 328 aa12.09□□□□□ -0.47
ZNF540-203ENST00000586134 RAPGEF4Q8WZA2 1011 aa12.08□□□□□ -0.48
ZNF540-203ENST00000586134 TBC1D32Q96NH3 1257 aa12.08□□□□□ -0.48
ZNF540-203ENST00000586134 SPDYE4A6NLX3 237 aa12.08□□□□□ -0.48
ZNF540-203ENST00000586134 TATP17735 454 aaPredicted RBP12.08□□□□□ -0.48
ZNF540-203ENST00000586134 NOP2P46087 812 aaKnown RBP12.08□□□□□ -0.48
ZNF540-203ENST00000586134 ZNF445P59923 1031 aa12.08□□□□□ -0.48
ZNF540-203ENST00000586134 TERF2Q15554 542 aa12.08□□□□□ -0.48
ZNF540-203ENST00000586134 SKAP1Q86WV1 359 aa12.08□□□□□ -0.48
ZNF540-203ENST00000586134 CHMP4CQ96CF2 233 aa12.08□□□□□ -0.48
ZNF540-203ENST00000586134 COL24A1Q17RW2 1714 aa12.07□□□□□ -0.48
ZNF540-203ENST00000586134 ITGB4P16144 1822 aa12.07□□□□□ -0.48
ZNF540-203ENST00000586134 KCNQ2O43526 872 aa12.07□□□□□ -0.48
ZNF540-203ENST00000586134 KIF1CO43896 1103 aaKnown RBP12.07□□□□□ -0.48
ZNF540-203ENST00000586134 SYCP1Q15431 976 aa12.07□□□□□ -0.48
ZNF540-203ENST00000586134 SLC27A3Q5K4L6 730 aa12.07□□□□□ -0.48
ZNF540-203ENST00000586134 RBM28Q9NW13 759 aaKnown RBP12.07□□□□□ -0.48
ZNF540-203ENST00000586134 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.07□□□□□ -0.48
ZNF540-203ENST00000586134 POLKQ9UBT6 870 aa12.07□□□□□ -0.48
ZNF540-203ENST00000586134 EMILIN1Q9Y6C2 1016 aa12.07□□□□□ -0.48
ZNF540-203ENST00000586134 PCDH11XQ9BZA7 1347 aa12.07□□□□□ -0.48
ZNF540-203ENST00000586134 PCDH11YQ9BZA8 1340 aa12.07□□□□□ -0.48
ZNF540-203ENST00000586134 ICE2Q659A1 982 aa12.06□□□□□ -0.48
ZNF540-203ENST00000586134 BCL2L12Q9HB09 334 aa12.06□□□□□ -0.48
ZNF540-203ENST00000586134 STK32BQ9NY57 414 aa12.06□□□□□ -0.48
ZNF540-203ENST00000586134 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
ZNF540-203ENST00000586134 NBPF11Q86T75 865 aa12.05□□□□□ -0.48
ZNF540-203ENST00000586134 DDX54Q8TDD1 881 aaKnown RBP12.05□□□□□ -0.48
ZNF540-203ENST00000586134 ACSBG1Q96GR2 724 aa12.05□□□□□ -0.48
ZNF540-203ENST00000586134 SLC15A2Q16348 729 aa12.04□□□□□ -0.48
ZNF540-203ENST00000586134 MNS1Q8NEH6 495 aa12.04□□□□□ -0.48
ZNF540-203ENST00000586134 ZNF592Q92610 1267 aa12.04□□□□□ -0.48
ZNF540-203ENST00000586134 SPON1Q9HCB6 807 aa12.04□□□□□ -0.48
ZNF540-203ENST00000586134 DIAPH3Q9NSV4 1193 aa12.04□□□□□ -0.48
ZNF540-203ENST00000586134 KIF16BQ96L93 1317 aa12.04□□□□□ -0.48
ZNF540-203ENST00000586134 TOGARAM1Q9Y4F4 1720 aa12.04□□□□□ -0.48
ZNF540-203ENST00000586134 IGSF3O75054 1194 aa12.04□□□□□ -0.48
ZNF540-203ENST00000586134 GUCY2CP25092 1073 aa12.04□□□□□ -0.48
ZNF540-203ENST00000586134 MAP2K1Q02750 393 aaPredicted RBP12.04□□□□□ -0.48
ZNF540-203ENST00000586134 NKX1-1Q15270 411 aaPredicted RBP12.04□□□□□ -0.48
ZNF540-203ENST00000586134 DONSONQ9NYP3 566 aa12.04□□□□□ -0.48
ZNF540-203ENST00000586134 MORC2Q9Y6X9 1032 aaPredicted RBP12.04□□□□□ -0.48
ZNF540-203ENST00000586134 SRCAPQ6ZRS2 3230 aa12.04□□□□□ -0.48
ZNF540-203ENST00000586134 TAF1LQ8IZX4 1826 aa12.04□□□□□ -0.48
ZNF540-203ENST00000586134 NPC1L1Q9UHC9 1359 aa12.03□□□□□ -0.48
ZNF540-203ENST00000586134 KIF7Q2M1P5 1343 aa12.03□□□□□ -0.48
ZNF540-203ENST00000586134 GOLGA6L22H0YM25 854 aa12.03□□□□□ -0.48
ZNF540-203ENST00000586134 U2AF2P26368 475 aaKnown RBP eCLIP12.03□□□□□ -0.48
ZNF540-203ENST00000586134 KLHL40Q2TBA0 621 aa12.03□□□□□ -0.48
ZNF540-203ENST00000586134 CT47A1Q5JQC4 288 aaPredicted RBP12.03□□□□□ -0.48
ZNF540-203ENST00000586134 RASSF4Q9H2L5 321 aa12.03□□□□□ -0.48
ZNF540-203ENST00000586134 KNSTRNQ9Y448 316 aa12.03□□□□□ -0.48
ZNF540-203ENST00000586134 TUBGCP6Q96RT7 1819 aa12.03□□□□□ -0.48
ZNF540-203ENST00000586134 DHX16O60231 1041 aaKnown RBP12.03□□□□□ -0.48
ZNF540-203ENST00000586134 DDIT3P35638 169 aa12.03□□□□□ -0.48
ZNF540-203ENST00000586134 IGSF1Q8N6C5 1336 aa12.02□□□□□ -0.49
ZNF540-203ENST00000586134 TTC36A6NLP5 189 aa12.02□□□□□ -0.49
ZNF540-203ENST00000586134 EYA1Q99502 592 aa12.02□□□□□ -0.49
ZNF540-203ENST00000586134 DDX41Q9UJV9 622 aaKnown RBP12.02□□□□□ -0.49
ZNF540-203ENST00000586134 SPG7Q9UQ90 795 aa12.02□□□□□ -0.49
ZNF540-203ENST00000586134 ZNF831Q5JPB2 1677 aa12.02□□□□□ -0.49
ZNF540-203ENST00000586134 GOLIM4O00461 696 aa12.01□□□□□ -0.49
ZNF540-203ENST00000586134 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
ZNF540-203ENST00000586134 NBPF9Q3BBW0 867 aa12.01□□□□□ -0.49
ZNF540-203ENST00000586134 USHBP1Q8N6Y0 703 aa12.01□□□□□ -0.49
ZNF540-203ENST00000586134 ZBTB9Q96C00 473 aa12.01□□□□□ -0.49
ZNF540-203ENST00000586134 BSDC1Q9NW68 430 aaPredicted RBP12.01□□□□□ -0.49
ZNF540-203ENST00000586134 RSPH14Q9UHP6 348 aa12.01□□□□□ -0.49
ZNF540-203ENST00000586134 SH3BP1Q9Y3L3 701 aa12.01□□□□□ -0.49
ZNF540-203ENST00000586134 C5P01031 1676 aa12.01□□□□□ -0.49
ZNF540-203ENST00000586134 CYP27B1O15528 508 aa12.01□□□□□ -0.49
ZNF540-203ENST00000586134 CTIFO43310 598 aaKnown RBP12.01□□□□□ -0.49
ZNF540-203ENST00000586134 EIF4A2Q14240 407 aaKnown RBP12.01□□□□□ -0.49
ZNF540-203ENST00000586134 CLEC17AQ6ZS10 378 aa12.01□□□□□ -0.49
ZNF540-203ENST00000586134 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12□□□□□ -0.49
ZNF540-203ENST00000586134 CALRP27797 417 aaKnown RBP12□□□□□ -0.49
ZNF540-203ENST00000586134 MORC1Q86VD1 984 aa12□□□□□ -0.49
ZNF540-203ENST00000586134 SLC16A10Q8TF71 515 aa12□□□□□ -0.49
ZNF540-203ENST00000586134 PIBF1Q8WXW3 757 aa12□□□□□ -0.49
ZNF540-203ENST00000586134 AKT1S1Q96B36 256 aa12□□□□□ -0.49
ZNF540-203ENST00000586134 SPINK5Q9NQ38 1064 aaPredicted RBP12□□□□□ -0.49
ZNF540-203ENST00000586134 GOLGA6L6A8MZA4 724 aa11.99□□□□□ -0.49
ZNF540-203ENST00000586134 PER1O15534 1290 aaPredicted RBP11.99□□□□□ -0.49
ZNF540-203ENST00000586134 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.99□□□□□ -0.49
ZNF540-203ENST00000586134 LRRC4BQ9NT99 713 aa11.99□□□□□ -0.49
ZNF540-203ENST00000586134 SSR1P43307 286 aaKnown RBP11.99□□□□□ -0.49
ZNF540-203ENST00000586134 CHAF1AQ13111 956 aaPredicted RBP11.99□□□□□ -0.49
ZNF540-203ENST00000586134 KRT222Q8N1A0 295 aa11.99□□□□□ -0.49
ZNF540-203ENST00000586134 MTFR1LQ9H019 292 aa11.99□□□□□ -0.49
ZNF540-203ENST00000586134 MED4Q9NPJ6 270 aa11.99□□□□□ -0.49
ZNF540-203ENST00000586134 CTNNA3Q9UI47 895 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms