RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 ANKRD31Q8N7Z5 1873 aa12.53□□□□□ -0.4
SDF2-203ENST00000585749 COL11A2P13942 1736 aaPredicted RBP12.52□□□□□ -0.41
SDF2-203ENST00000585749 SERPINB2P05120 415 aa12.52□□□□□ -0.41
SDF2-203ENST00000585749 ZNF530Q6P9A1 599 aaPredicted RBP12.52□□□□□ -0.41
SDF2-203ENST00000585749 IFNLR1Q8IU57 520 aaPredicted RBP12.52□□□□□ -0.41
SDF2-203ENST00000585749 NFATC2IPQ8NCF5 419 aa12.52□□□□□ -0.41
SDF2-203ENST00000585749 H0YIN7 160 aa12.51□□□□□ -0.41
SDF2-203ENST00000585749 DDNO94850 711 aaPredicted RBP12.51□□□□□ -0.41
SDF2-203ENST00000585749 HSPA8P11142 646 aaKnown RBP12.51□□□□□ -0.41
SDF2-203ENST00000585749 PLEKHO1Q53GL0 409 aaPredicted RBP12.51□□□□□ -0.41
SDF2-203ENST00000585749 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
SDF2-203ENST00000585749 NARFQ9UHQ1 456 aa12.51□□□□□ -0.41
SDF2-203ENST00000585749 COL15A1P39059 1388 aa12.51□□□□□ -0.41
SDF2-203ENST00000585749 SCN11AQ9UI33 1791 aa12.51□□□□□ -0.41
SDF2-203ENST00000585749 SCN4AP35499 1836 aa12.51□□□□□ -0.41
SDF2-203ENST00000585749 ZEB1P37275 1124 aaPredicted RBP12.5□□□□□ -0.41
SDF2-203ENST00000585749 MTHFSP49914 203 aa12.5□□□□□ -0.41
SDF2-203ENST00000585749 CC2D1BQ5T0F9 858 aaKnown RBP12.5□□□□□ -0.41
SDF2-203ENST00000585749 DNAJC10Q8IXB1 793 aa12.5□□□□□ -0.41
SDF2-203ENST00000585749 ADAMTSL1Q8N6G6 1762 aa12.49□□□□□ -0.41
SDF2-203ENST00000585749 LTBP3Q9NS15 1303 aa12.49□□□□□ -0.41
SDF2-203ENST00000585749 TMEM88BA6NKF7 163 aa12.49□□□□□ -0.41
SDF2-203ENST00000585749 C21orf2O43822 256 aa12.49□□□□□ -0.41
SDF2-203ENST00000585749 AMOTQ4VCS5 1084 aa12.49□□□□□ -0.41
SDF2-203ENST00000585749 LDHDQ86WU2 507 aa12.49□□□□□ -0.41
SDF2-203ENST00000585749 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
SDF2-203ENST00000585749 COL3A1P02461 1466 aaPredicted RBP12.48□□□□□ -0.41
SDF2-203ENST00000585749 ITGBL1O95965 494 aaPredicted RBP12.48□□□□□ -0.41
SDF2-203ENST00000585749 CYP19A1P11511 503 aaPredicted RBP12.48□□□□□ -0.41
SDF2-203ENST00000585749 RGS19P49795 217 aa12.48□□□□□ -0.41
SDF2-203ENST00000585749 MLLT1Q03111 559 aaPredicted RBP12.48□□□□□ -0.41
SDF2-203ENST00000585749 CACNA1SQ13698 1873 aa12.48□□□□□ -0.41
SDF2-203ENST00000585749 IQCA1LA6NCM1 817 aa12.47□□□□□ -0.41
SDF2-203ENST00000585749 RASSF10A6NK89 507 aa12.47□□□□□ -0.41
SDF2-203ENST00000585749 IL13P35225 146 aa12.47□□□□□ -0.41
SDF2-203ENST00000585749 C1orf141Q5JVX7 400 aa12.47□□□□□ -0.41
SDF2-203ENST00000585749 ZNF622Q969S3 477 aaKnown RBP eCLIP12.47□□□□□ -0.41
SDF2-203ENST00000585749 L3MBTL3Q96JM7 780 aaPredicted RBP12.47□□□□□ -0.41
SDF2-203ENST00000585749 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
SDF2-203ENST00000585749 TAF1DQ9H5J8 278 aaPredicted RBP12.47□□□□□ -0.41
SDF2-203ENST00000585749 ZBTB1Q9Y2K1 713 aa12.47□□□□□ -0.41
SDF2-203ENST00000585749 ARFGEF2Q9Y6D5 1785 aa12.47□□□□□ -0.41
SDF2-203ENST00000585749 THSD7BQ9C0I4 1608 aa12.47□□□□□ -0.41
SDF2-203ENST00000585749 SLX4Q8IY92 1834 aa12.46□□□□□ -0.41
SDF2-203ENST00000585749 AEBP1Q8IUX7 1158 aa12.46□□□□□ -0.41
SDF2-203ENST00000585749 MRC1P22897 1456 aa12.46□□□□□ -0.42
SDF2-203ENST00000585749 SCN7AQ01118 1682 aa12.45□□□□□ -0.42
SDF2-203ENST00000585749 CCDC85CA6NKD9 419 aa12.45□□□□□ -0.42
SDF2-203ENST00000585749 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
SDF2-203ENST00000585749 WDR33Q9C0J8 1336 aaKnown RBP12.44□□□□□ -0.42
SDF2-203ENST00000585749 PDE6BP35913 854 aa12.44□□□□□ -0.42
SDF2-203ENST00000585749 MAP2K1Q02750 393 aaPredicted RBP12.44□□□□□ -0.42
SDF2-203ENST00000585749 DEFB115Q30KQ5 88 aa12.44□□□□□ -0.42
SDF2-203ENST00000585749 BICDL1Q6ZP65 573 aa12.44□□□□□ -0.42
SDF2-203ENST00000585749 BRIP1Q9BX63 1249 aa12.44□□□□□ -0.42
SDF2-203ENST00000585749 DIAPH1O60610 1272 aaKnown RBP12.43□□□□□ -0.42
SDF2-203ENST00000585749 EAPPQ56P03 285 aaPredicted RBP12.43□□□□□ -0.42
SDF2-203ENST00000585749 SULT6B1Q6IMI4 303 aa12.43□□□□□ -0.42
SDF2-203ENST00000585749 PRR5LQ6MZQ0 368 aa12.43□□□□□ -0.42
SDF2-203ENST00000585749 SLC52A2Q9HAB3 445 aa12.43□□□□□ -0.42
SDF2-203ENST00000585749 UBR2Q8IWV8 1755 aa12.43□□□□□ -0.42
SDF2-203ENST00000585749 TNRC18O15417 2968 aaPredicted RBP12.42□□□□□ -0.42
SDF2-203ENST00000585749 SLC39A6Q13433 755 aa12.42□□□□□ -0.42
SDF2-203ENST00000585749 TBC1D9BQ66K14 1250 aa12.42□□□□□ -0.42
SDF2-203ENST00000585749 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
SDF2-203ENST00000585749 ZNF541Q9H0D2 1346 aa12.41□□□□□ -0.42
SDF2-203ENST00000585749 CANXP27824 592 aaKnown RBP12.41□□□□□ -0.42
SDF2-203ENST00000585749 CLCN6P51797 869 aa12.41□□□□□ -0.42
SDF2-203ENST00000585749 EIF5P55010 431 aaKnown RBP12.41□□□□□ -0.42
SDF2-203ENST00000585749 CNGB1Q14028 1251 aaPredicted RBP12.41□□□□□ -0.42
SDF2-203ENST00000585749 SOGA3Q5TF21 947 aa12.41□□□□□ -0.42
SDF2-203ENST00000585749 PRPF40BQ6NWY9 871 aaKnown RBP12.41□□□□□ -0.42
SDF2-203ENST00000585749 VSIG10Q8N0Z9 540 aa12.41□□□□□ -0.42
SDF2-203ENST00000585749 CNKSR1Q969H4 720 aa12.41□□□□□ -0.42
SDF2-203ENST00000585749 HACL1Q9UJ83 578 aa12.41□□□□□ -0.42
SDF2-203ENST00000585749 LTBP1Q14766 1721 aa12.4□□□□□ -0.42
SDF2-203ENST00000585749 EPHX2P34913 555 aa12.4□□□□□ -0.42
SDF2-203ENST00000585749 AKAP4Q5JQC9 854 aa12.4□□□□□ -0.42
SDF2-203ENST00000585749 MAP1SQ66K74 1059 aaPredicted RBP12.4□□□□□ -0.42
SDF2-203ENST00000585749 STYK1Q6J9G0 422 aa12.4□□□□□ -0.42
SDF2-203ENST00000585749 CNTROBQ8N137 903 aa12.4□□□□□ -0.42
SDF2-203ENST00000585749 LGR6Q9HBX8 967 aa12.4□□□□□ -0.42
SDF2-203ENST00000585749 SRGNP10124 158 aa12.39□□□□□ -0.43
SDF2-203ENST00000585749 PPP2R1AP30153 589 aa12.39□□□□□ -0.43
SDF2-203ENST00000585749 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
SDF2-203ENST00000585749 C7orf43Q8WVR3 580 aa12.39□□□□□ -0.43
SDF2-203ENST00000585749 FAM212AQ96EL1 285 aa12.39□□□□□ -0.43
SDF2-203ENST00000585749 CFAP53Q96M91 514 aa12.39□□□□□ -0.43
SDF2-203ENST00000585749 ABT1Q9ULW3 272 aaKnown RBP12.39□□□□□ -0.43
SDF2-203ENST00000585749 RNF123Q5XPI4 1314 aa12.38□□□□□ -0.43
SDF2-203ENST00000585749 A0A087WZG4 1122 aa12.38□□□□□ -0.43
SDF2-203ENST00000585749 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
SDF2-203ENST00000585749 HMOX1P09601 288 aa12.38□□□□□ -0.43
SDF2-203ENST00000585749 PNMA8AQ86V59 439 aaPredicted RBP12.38□□□□□ -0.43
SDF2-203ENST00000585749 SPOCK2Q92563 424 aa12.38□□□□□ -0.43
SDF2-203ENST00000585749 MASTLQ96GX5 879 aa12.38□□□□□ -0.43
SDF2-203ENST00000585749 PDE4DIPQ5VU43 2346 aa12.37□□□□□ -0.43
SDF2-203ENST00000585749 RNMTO43148 476 aaKnown RBP12.37□□□□□ -0.43
SDF2-203ENST00000585749 CNBD1Q8NA66 436 aa12.37□□□□□ -0.43
SDF2-203ENST00000585749 CAPNS2Q96L46 248 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms