RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 CREBZFQ9NS37 354 aa14.32□□□□□ -0.12
CSNK1D-226ENST00000585026 CEMIPQ8WUJ3 1361 aa14.32□□□□□ -0.12
CSNK1D-226ENST00000585026 RGL2O15211 777 aa14.31□□□□□ -0.12
CSNK1D-226ENST00000585026 SNRPA1P09661 255 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-226ENST00000585026 PRKAR2BP31323 418 aa14.31□□□□□ -0.12
CSNK1D-226ENST00000585026 TPTE2Q6XPS3 522 aa14.31□□□□□ -0.12
CSNK1D-226ENST00000585026 DLEC1Q9Y238 1755 aa14.31□□□□□ -0.12
CSNK1D-226ENST00000585026 UBR2Q8IWV8 1755 aa14.3□□□□□ -0.12
CSNK1D-226ENST00000585026 CAPN15O75808 1086 aa14.3□□□□□ -0.12
CSNK1D-226ENST00000585026 DDNO94850 711 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-226ENST00000585026 CCDC93Q567U6 631 aa14.3□□□□□ -0.12
CSNK1D-226ENST00000585026 NPR1P16066 1061 aa14.29□□□□□ -0.12
CSNK1D-226ENST00000585026 USP16Q9Y5T5 823 aa14.29□□□□□ -0.12
CSNK1D-226ENST00000585026 COL3A1P02461 1466 aaPredicted RBP14.29□□□□□ -0.12
CSNK1D-226ENST00000585026 HTATSF1O43719 755 aaKnown RBP14.28□□□□□ -0.12
CSNK1D-226ENST00000585026 U2AF1L5P0DN76 240 aaPredicted RBP14.28□□□□□ -0.12
CSNK1D-226ENST00000585026 U2AF1Q01081 240 aaKnown RBP eCLIP14.28□□□□□ -0.12
CSNK1D-226ENST00000585026 LDHDQ86WU2 507 aa14.28□□□□□ -0.12
CSNK1D-226ENST00000585026 RTKN2Q8IZC4 609 aa14.28□□□□□ -0.12
CSNK1D-226ENST00000585026 PHACTR3Q96KR7 559 aa14.28□□□□□ -0.12
CSNK1D-226ENST00000585026 RSPH6AQ9H0K4 717 aa14.28□□□□□ -0.12
CSNK1D-226ENST00000585026 KCNQ3O43525 872 aa14.27□□□□□ -0.13
CSNK1D-226ENST00000585026 NEFMP07197 916 aa14.27□□□□□ -0.13
CSNK1D-226ENST00000585026 GTF2E1P29083 439 aaPredicted RBP14.27□□□□□ -0.13
CSNK1D-226ENST00000585026 ALDH1B1P30837 517 aa14.27□□□□□ -0.13
CSNK1D-226ENST00000585026 FKBP4Q02790 459 aaKnown RBP eCLIP14.27□□□□□ -0.13
CSNK1D-226ENST00000585026 L3MBTL3Q96JM7 780 aaPredicted RBP14.27□□□□□ -0.13
CSNK1D-226ENST00000585026 TIAM2Q8IVF5 1701 aa14.27□□□□□ -0.13
CSNK1D-226ENST00000585026 SCN7AQ01118 1682 aa14.26□□□□□ -0.13
CSNK1D-226ENST00000585026 C7orf43Q8WVR3 580 aa14.26□□□□□ -0.13
CSNK1D-226ENST00000585026 MKRN1Q9UHC7 482 aaKnown RBP14.26□□□□□ -0.13
CSNK1D-226ENST00000585026 NIP7Q9Y221 180 aaKnown RBP eCLIP14.26□□□□□ -0.13
CSNK1D-226ENST00000585026 KLRG2A4D1S0 409 aaPredicted RBP14.25□□□□□ -0.13
CSNK1D-226ENST00000585026 PIP4K2AP48426 406 aaPredicted RBP14.25□□□□□ -0.13
CSNK1D-226ENST00000585026 TAF1DQ9H5J8 278 aaPredicted RBP14.25□□□□□ -0.13
CSNK1D-226ENST00000585026 TAF7Q15545 349 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-226ENST00000585026 MCM10Q7L590 875 aa14.24□□□□□ -0.13
CSNK1D-226ENST00000585026 PNMA8AQ86V59 439 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-226ENST00000585026 AIDAQ96BJ3 306 aa14.24□□□□□ -0.13
CSNK1D-226ENST00000585026 NYXQ9GZU5 481 aa14.24□□□□□ -0.13
CSNK1D-226ENST00000585026 HACL1Q9UJ83 578 aa14.24□□□□□ -0.13
CSNK1D-226ENST00000585026 CLEC11AQ9Y240 323 aa14.24□□□□□ -0.13
CSNK1D-226ENST00000585026 VIRMAQ69YN4 1812 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-226ENST00000585026 TMEM88BA6NKF7 163 aa14.23□□□□□ -0.13
CSNK1D-226ENST00000585026 POTEIP0CG38 1075 aa14.23□□□□□ -0.13
CSNK1D-226ENST00000585026 POTEJP0CG39 1038 aa14.23□□□□□ -0.13
CSNK1D-226ENST00000585026 EAPPQ56P03 285 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-226ENST00000585026 DIEXFQ68CQ4 756 aaKnown RBP14.23□□□□□ -0.13
CSNK1D-226ENST00000585026 CC2D2BQ6DHV5 1058 aa14.23□□□□□ -0.13
CSNK1D-226ENST00000585026 PNISRQ8TF01 805 aaKnown RBP14.23□□□□□ -0.13
CSNK1D-226ENST00000585026 JDP2Q8WYK2 163 aa14.23□□□□□ -0.13
CSNK1D-226ENST00000585026 ZNF277Q9NRM2 450 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-226ENST00000585026 FER1L6Q2WGJ9 1857 aa14.23□□□□□ -0.13
CSNK1D-226ENST00000585026 CCDC88AQ3V6T2 1871 aa14.23□□□□□ -0.13
CSNK1D-226ENST00000585026 ANKRD31Q8N7Z5 1873 aa14.23□□□□□ -0.13
CSNK1D-226ENST00000585026 PRAMEF22A3QJZ6 481 aa14.22□□□□□ -0.13
CSNK1D-226ENST00000585026 FAM177BA6PVY3 158 aa14.22□□□□□ -0.13
CSNK1D-226ENST00000585026 GRIPAP1Q4V328 841 aa14.22□□□□□ -0.13
CSNK1D-226ENST00000585026 CNTNAP1P78357 1384 aa14.22□□□□□ -0.13
CSNK1D-226ENST00000585026 PASKQ96RG2 1323 aa14.21□□□□□ -0.13
CSNK1D-226ENST00000585026 NBPF26B4DH59 902 aa14.21□□□□□ -0.13
CSNK1D-226ENST00000585026 EPHX2P34913 555 aa14.21□□□□□ -0.13
CSNK1D-226ENST00000585026 IARSP41252 1262 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-226ENST00000585026 NBPF10Q6P3W6 841 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-226ENST00000585026 SYNE4Q8N205 404 aa14.21□□□□□ -0.13
CSNK1D-226ENST00000585026 NBPF15Q8N660 670 aa14.21□□□□□ -0.13
CSNK1D-226ENST00000585026 PRDM10Q9NQV6 1147 aa14.21□□□□□ -0.13
CSNK1D-226ENST00000585026 DICER1Q9UPY3 1922 aaKnown RBP14.21□□□□□ -0.14
CSNK1D-226ENST00000585026 COL11A2P13942 1736 aaPredicted RBP14.21□□□□□ -0.14
CSNK1D-226ENST00000585026 SLX4Q8IY92 1834 aa14.2□□□□□ -0.14
CSNK1D-226ENST00000585026 SIPA1L3O60292 1781 aaPredicted RBP14.2□□□□□ -0.14
CSNK1D-226ENST00000585026 ERVV-1B6SEH8 477 aa14.2□□□□□ -0.14
CSNK1D-226ENST00000585026 PPP2R1AP30153 589 aa14.2□□□□□ -0.14
CSNK1D-226ENST00000585026 EIF6P56537 245 aaKnown RBP14.2□□□□□ -0.14
CSNK1D-226ENST00000585026 KIF6Q6ZMV9 814 aa14.2□□□□□ -0.14
CSNK1D-226ENST00000585026 GPC2Q8N158 579 aa14.2□□□□□ -0.14
CSNK1D-226ENST00000585026 PSMD1Q99460 953 aa14.2□□□□□ -0.14
CSNK1D-226ENST00000585026 TMX4Q9H1E5 349 aaPredicted RBP14.2□□□□□ -0.14
CSNK1D-226ENST00000585026 FZD9O00144 591 aa14.19□□□□□ -0.14
CSNK1D-226ENST00000585026 ITGBL1O95965 494 aaPredicted RBP14.19□□□□□ -0.14
CSNK1D-226ENST00000585026 LMOD1P29536 600 aaPredicted RBP14.19□□□□□ -0.14
CSNK1D-226ENST00000585026 CTCFP49711 727 aaPredicted RBP14.19□□□□□ -0.14
CSNK1D-226ENST00000585026 DCTN1Q14203 1278 aa14.19□□□□□ -0.14
CSNK1D-226ENST00000585026 RPGRQ92834 1020 aaKnown RBP14.19□□□□□ -0.14
CSNK1D-226ENST00000585026 ZNF541Q9H0D2 1346 aa14.18□□□□□ -0.14
CSNK1D-226ENST00000585026 HLFQ16534 295 aa14.18□□□□□ -0.14
CSNK1D-226ENST00000585026 CNTROBQ8N137 903 aa14.18□□□□□ -0.14
CSNK1D-226ENST00000585026 NGEFQ8N5V2 710 aa14.18□□□□□ -0.14
CSNK1D-226ENST00000585026 PNNQ9H307 717 aaKnown RBP14.18□□□□□ -0.14
CSNK1D-226ENST00000585026 BCORQ6W2J9 1755 aa14.17□□□□□ -0.14
CSNK1D-226ENST00000585026 FOXN1O15353 648 aa14.17□□□□□ -0.14
CSNK1D-226ENST00000585026 VEGFBP49765 207 aa14.17□□□□□ -0.14
CSNK1D-226ENST00000585026 DEFB115Q30KQ5 88 aa14.17□□□□□ -0.14
CSNK1D-226ENST00000585026 CRY2Q49AN0 593 aa14.17□□□□□ -0.14
CSNK1D-226ENST00000585026 RNF123Q5XPI4 1314 aa14.16□□□□□ -0.14
CSNK1D-226ENST00000585026 MAP3K15Q6ZN16 1313 aa14.16□□□□□ -0.14
CSNK1D-226ENST00000585026 SCN4AP35499 1836 aa14.16□□□□□ -0.14
CSNK1D-226ENST00000585026 OLFM4Q6UX06 510 aa14.16□□□□□ -0.14
CSNK1D-226ENST00000585026 RBM17Q96I25 401 aaKnown RBP14.16□□□□□ -0.14
CSNK1D-226ENST00000585026 RRP7AQ9Y3A4 280 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms