RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 TRPM3Q9HCF6 1732 aaPredicted RBP7.93□□□□□ -1.14
CDH8-213ENST00000584966 RNF225M0QZC1 329 aaPredicted RBP7.93□□□□□ -1.14
CDH8-213ENST00000584966 PPFIA3O75145 1194 aa7.93□□□□□ -1.14
CDH8-213ENST00000584966 TIMP2P16035 220 aa7.93□□□□□ -1.14
CDH8-213ENST00000584966 WDR4P57081 412 aaKnown RBP7.93□□□□□ -1.14
CDH8-213ENST00000584966 LINC01559Q495D7 138 aa7.93□□□□□ -1.14
CDH8-213ENST00000584966 ADAMTS8Q9UP79 889 aa7.93□□□□□ -1.14
CDH8-213ENST00000584966 ANKARQ7Z5J8 1434 aa7.93□□□□□ -1.14
CDH8-213ENST00000584966 MYOM1P52179 1685 aa7.92□□□□□ -1.14
CDH8-213ENST00000584966 HOXA2O43364 376 aa7.92□□□□□ -1.14
CDH8-213ENST00000584966 MAN1A2O60476 641 aa7.92□□□□□ -1.14
CDH8-213ENST00000584966 HSPA5P11021 654 aaKnown RBP7.92□□□□□ -1.14
CDH8-213ENST00000584966 PIP4K2BP78356 416 aa7.92□□□□□ -1.14
CDH8-213ENST00000584966 GPAT2Q6NUI2 795 aa7.92□□□□□ -1.14
CDH8-213ENST00000584966 IL27Q8NEV9 243 aa7.92□□□□□ -1.14
CDH8-213ENST00000584966 NUDT16Q96DE0 195 aaKnown RBP7.92□□□□□ -1.14
CDH8-213ENST00000584966 DISP3Q9P2K9 1392 aa7.92□□□□□ -1.14
CDH8-213ENST00000584966 ADH1CP00326 375 aa7.91□□□□□ -1.14
CDH8-213ENST00000584966 USP46P62068 366 aa7.91□□□□□ -1.14
CDH8-213ENST00000584966 EIF4G2P78344 907 aaKnown RBP eCLIP7.91□□□□□ -1.14
CDH8-213ENST00000584966 MAP2K5Q13163 448 aa7.91□□□□□ -1.14
CDH8-213ENST00000584966 DDX17Q92841 729 aaKnown RBP7.91□□□□□ -1.14
CDH8-213ENST00000584966 PUS7Q96PZ0 661 aaKnown RBP7.91□□□□□ -1.14
CDH8-213ENST00000584966 EVC2Q86UK5 1308 aa7.91□□□□□ -1.14
CDH8-213ENST00000584966 ALS2Q96Q42 1657 aa7.91□□□□□ -1.14
CDH8-213ENST00000584966 MON2Q7Z3U7 1717 aa7.91□□□□□ -1.14
CDH8-213ENST00000584966 MARF1Q9Y4F3 1742 aaKnown RBP7.9□□□□□ -1.14
CDH8-213ENST00000584966 PXDNQ92626 1479 aa7.9□□□□□ -1.14
CDH8-213ENST00000584966 CD163L1Q9NR16 1453 aa7.9□□□□□ -1.14
CDH8-213ENST00000584966 PLEKHG3A1L390 1219 aa7.9□□□□□ -1.14
CDH8-213ENST00000584966 ESCO1Q5FWF5 840 aa7.9□□□□□ -1.14
CDH8-213ENST00000584966 C6orf118Q5T5N4 469 aa7.9□□□□□ -1.14
CDH8-213ENST00000584966 CRYBG1Q9Y4K1 1723 aa7.89□□□□□ -1.15
CDH8-213ENST00000584966 SHPRHQ149N8 1683 aa7.89□□□□□ -1.15
CDH8-213ENST00000584966 POLR3AO14802 1390 aaPredicted RBP7.89□□□□□ -1.15
CDH8-213ENST00000584966 SOS2Q07890 1332 aaPredicted RBP7.89□□□□□ -1.15
CDH8-213ENST00000584966 HSPA1LP34931 641 aa7.89□□□□□ -1.15
CDH8-213ENST00000584966 KRT76Q01546 638 aa7.89□□□□□ -1.15
CDH8-213ENST00000584966 PMFBP1Q8TBY8 1022 aa7.89□□□□□ -1.15
CDH8-213ENST00000584966 BAP1Q92560 729 aa7.89□□□□□ -1.15
CDH8-213ENST00000584966 CCDC102AQ96A19 550 aa7.89□□□□□ -1.15
CDH8-213ENST00000584966 CNTNAP3BQ96NU0 1288 aa7.89□□□□□ -1.15
CDH8-213ENST00000584966 CNTNAP3Q9BZ76 1288 aa7.89□□□□□ -1.15
CDH8-213ENST00000584966 NRKQ7Z2Y5 1582 aa7.88□□□□□ -1.15
CDH8-213ENST00000584966 PPIP5K1Q6PFW1 1433 aa7.88□□□□□ -1.15
CDH8-213ENST00000584966 IRF6O14896 467 aa7.88□□□□□ -1.15
CDH8-213ENST00000584966 FOXO3O43524 673 aa7.88□□□□□ -1.15
CDH8-213ENST00000584966 CCNYL3P0C7X3 344 aa7.88□□□□□ -1.15
CDH8-213ENST00000584966 ZEB1P37275 1124 aaPredicted RBP7.88□□□□□ -1.15
CDH8-213ENST00000584966 SRPK2P78362 688 aaKnown RBP7.88□□□□□ -1.15
CDH8-213ENST00000584966 AMHR2Q16671 573 aa7.88□□□□□ -1.15
CDH8-213ENST00000584966 RETREG3Q86VR2 466 aa7.88□□□□□ -1.15
CDH8-213ENST00000584966 UNC93B1Q9H1C4 597 aa7.88□□□□□ -1.15
CDH8-213ENST00000584966 CABP1Q9NZU7 370 aa7.88□□□□□ -1.15
CDH8-213ENST00000584966 COL22A1Q8NFW1 1626 aaPredicted RBP7.88□□□□□ -1.15
CDH8-213ENST00000584966 CPSF1Q10570 1443 aaKnown RBP7.87□□□□□ -1.15
CDH8-213ENST00000584966 SSH2Q76I76 1423 aa7.87□□□□□ -1.15
CDH8-213ENST00000584966 ABCA3Q99758 1704 aa7.87□□□□□ -1.15
CDH8-213ENST00000584966 ACEP12821 1306 aa7.87□□□□□ -1.15
CDH8-213ENST00000584966 TMF1P82094 1093 aa7.87□□□□□ -1.15
CDH8-213ENST00000584966 XP32Q5T750 250 aa7.87□□□□□ -1.15
CDH8-213ENST00000584966 GPR161Q8N6U8 529 aaKnown RBP7.87□□□□□ -1.15
CDH8-213ENST00000584966 SLC12A5Q9H2X9 1139 aa7.87□□□□□ -1.15
CDH8-213ENST00000584966 ATAD2Q6PL18 1390 aa7.86□□□□□ -1.15
CDH8-213ENST00000584966 MS4A1P11836 297 aa7.86□□□□□ -1.15
CDH8-213ENST00000584966 VARSP26640 1264 aaKnown RBP7.86□□□□□ -1.15
CDH8-213ENST00000584966 IRS1P35568 1242 aa7.86□□□□□ -1.15
CDH8-213ENST00000584966 KRT28Q7Z3Y7 464 aa7.86□□□□□ -1.15
CDH8-213ENST00000584966 KLF16Q9BXK1 252 aaPredicted RBP7.86□□□□□ -1.15
CDH8-213ENST00000584966 FAM117AQ9C073 453 aa7.86□□□□□ -1.15
CDH8-213ENST00000584966 ZFAND3Q9H8U3 227 aa7.86□□□□□ -1.15
CDH8-213ENST00000584966 PIK3C2AO00443 1686 aa7.86□□□□□ -1.15
CDH8-213ENST00000584966 USP54Q70EL1 1684 aa7.86□□□□□ -1.15
CDH8-213ENST00000584966 NPHP3Q7Z494 1330 aa7.85□□□□□ -1.15
CDH8-213ENST00000584966 MDM2Q00987 491 aaPredicted RBP7.85□□□□□ -1.15
CDH8-213ENST00000584966 XPCQ01831 940 aaPredicted RBP7.85□□□□□ -1.15
CDH8-213ENST00000584966 MPNDQ8N594 471 aa7.85□□□□□ -1.15
CDH8-213ENST00000584966 ZNF511Q8NB15 262 aa7.85□□□□□ -1.15
CDH8-213ENST00000584966 DNMT3AQ9Y6K1 912 aaPredicted RBP7.85□□□□□ -1.15
CDH8-213ENST00000584966 KIF20BQ96Q89 1820 aa7.85□□□□□ -1.15
CDH8-213ENST00000584966 SBNO1A3KN83 1393 aa7.84□□□□□ -1.15
CDH8-213ENST00000584966 KIF7Q2M1P5 1343 aa7.84□□□□□ -1.15
CDH8-213ENST00000584966 SPATA31A3Q5VYP0 1347 aa7.84□□□□□ -1.15
CDH8-213ENST00000584966 WASHC2AQ641Q2 1341 aa7.84□□□□□ -1.15
CDH8-213ENST00000584966 ZIC2O95409 532 aaPredicted RBP7.84□□□□□ -1.15
CDH8-213ENST00000584966 HOMEZQ8IX15 550 aa7.84□□□□□ -1.15
CDH8-213ENST00000584966 PARP9Q8IXQ6 854 aa7.84□□□□□ -1.15
CDH8-213ENST00000584966 PHRF1Q9P1Y6 1649 aaKnown RBP7.84□□□□□ -1.15
CDH8-213ENST00000584966 USP6P35125 1406 aa7.84□□□□□ -1.15
CDH8-213ENST00000584966 A0A1W2PP64 1363 aa7.84□□□□□ -1.16
CDH8-213ENST00000584966 C6orf229H3BNL8 230 aa7.83□□□□□ -1.16
CDH8-213ENST00000584966 IGHA1P01876 353 aa7.83□□□□□ -1.16
CDH8-213ENST00000584966 BMP2P12643 396 aa7.83□□□□□ -1.16
CDH8-213ENST00000584966 PSME1Q06323 249 aa7.83□□□□□ -1.16
CDH8-213ENST00000584966 ZNF385CQ66K41 422 aaPredicted RBP7.83□□□□□ -1.16
CDH8-213ENST00000584966 SVOPQ8N4V2 548 aa7.83□□□□□ -1.16
CDH8-213ENST00000584966 NGDNQ8NEJ9 315 aaKnown RBP7.83□□□□□ -1.16
CDH8-213ENST00000584966 LRRC59Q96AG4 307 aaKnown RBP7.83□□□□□ -1.16
CDH8-213ENST00000584966 ITPKCQ96DU7 683 aa7.83□□□□□ -1.16
CDH8-213ENST00000584966 DDRGK1Q96HY6 314 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms