RNA–Protein interactions for RNA: ENST00000584951.1

DDX42-219, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-219ENST00000584951 TAF1DQ9H5J8 278 aaPredicted RBP16.97■□□□□ 0.31
DDX42-219ENST00000584951 DIAPH1O60610 1272 aaKnown RBP16.96■□□□□ 0.31
DDX42-219ENST00000584951 CTCFP49711 727 aaPredicted RBP16.96■□□□□ 0.31
DDX42-219ENST00000584951 TRIM26Q12899 539 aaPredicted RBP16.96■□□□□ 0.31
DDX42-219ENST00000584951 C7orf43Q8WVR3 580 aa16.96■□□□□ 0.31
DDX42-219ENST00000584951 ADAMTSL1Q8N6G6 1762 aa16.96■□□□□ 0.31
DDX42-219ENST00000584951 TMEM88BA6NKF7 163 aa16.95■□□□□ 0.3
DDX42-219ENST00000584951 ITGBL1O95965 494 aaPredicted RBP16.95■□□□□ 0.3
DDX42-219ENST00000584951 TEFQ10587 303 aa16.95■□□□□ 0.3
DDX42-219ENST00000584951 IL17REQ8NFR9 667 aa16.95■□□□□ 0.3
DDX42-219ENST00000584951 AIDAQ96BJ3 306 aa16.95■□□□□ 0.3
DDX42-219ENST00000584951 VEGFBP49765 207 aa16.94■□□□□ 0.3
DDX42-219ENST00000584951 FMNL2Q96PY5 1086 aa16.94■□□□□ 0.3
DDX42-219ENST00000584951 WBP1LQ9NX94 342 aa16.94■□□□□ 0.3
DDX42-219ENST00000584951 ZNF330Q9Y3S2 320 aaPredicted RBP16.94■□□□□ 0.3
DDX42-219ENST00000584951 KLRG2A4D1S0 409 aaPredicted RBP16.93■□□□□ 0.3
DDX42-219ENST00000584951 GNAT3A8MTJ3 354 aa16.93■□□□□ 0.3
DDX42-219ENST00000584951 NPHP1O15259 732 aa16.93■□□□□ 0.3
DDX42-219ENST00000584951 A1BGP04217 495 aa16.93■□□□□ 0.3
DDX42-219ENST00000584951 CCDC93Q567U6 631 aa16.93■□□□□ 0.3
DDX42-219ENST00000584951 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
DDX42-219ENST00000584951 GAS2L2Q8NHY3 880 aa16.93■□□□□ 0.3
DDX42-219ENST00000584951 CEMIPQ8WUJ3 1361 aa16.92■□□□□ 0.3
DDX42-219ENST00000584951 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
DDX42-219ENST00000584951 CLEC4GQ6UXB4 293 aa16.92■□□□□ 0.3
DDX42-219ENST00000584951 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
DDX42-219ENST00000584951 COL3A1P02461 1466 aaPredicted RBP16.92■□□□□ 0.3
DDX42-219ENST00000584951 RASSF10A6NK89 507 aa16.91■□□□□ 0.3
DDX42-219ENST00000584951 NPR1P16066 1061 aa16.91■□□□□ 0.3
DDX42-219ENST00000584951 HACL1Q9UJ83 578 aa16.91■□□□□ 0.3
DDX42-219ENST00000584951 ZNF541Q9H0D2 1346 aa16.91■□□□□ 0.3
DDX42-219ENST00000584951 RGL2O15211 777 aa16.9■□□□□ 0.3
DDX42-219ENST00000584951 PER1O15534 1290 aaPredicted RBP16.89■□□□□ 0.29
DDX42-219ENST00000584951 EPHX2P34913 555 aa16.89■□□□□ 0.29
DDX42-219ENST00000584951 PNMA8AQ86V59 439 aaPredicted RBP16.89■□□□□ 0.29
DDX42-219ENST00000584951 NBPF5PQ86XG9 351 aaPredicted RBP16.89■□□□□ 0.29
DDX42-219ENST00000584951 RTKN2Q8IZC4 609 aa16.89■□□□□ 0.29
DDX42-219ENST00000584951 FZD9O00144 591 aa16.88■□□□□ 0.29
DDX42-219ENST00000584951 SLC34A2O95436 690 aa16.88■□□□□ 0.29
DDX42-219ENST00000584951 LBX1P52954 281 aa16.88■□□□□ 0.29
DDX42-219ENST00000584951 DEFB115Q30KQ5 88 aa16.88■□□□□ 0.29
DDX42-219ENST00000584951 EAPPQ56P03 285 aaPredicted RBP16.88■□□□□ 0.29
DDX42-219ENST00000584951 ZNF277Q9NRM2 450 aaPredicted RBP16.88■□□□□ 0.29
DDX42-219ENST00000584951 ZNF652Q9Y2D9 606 aa16.88■□□□□ 0.29
DDX42-219ENST00000584951 KCNQ3O43525 872 aa16.87■□□□□ 0.29
DDX42-219ENST00000584951 HSPA8P11142 646 aaKnown RBP16.87■□□□□ 0.29
DDX42-219ENST00000584951 CNTROBQ8N137 903 aa16.87■□□□□ 0.29
DDX42-219ENST00000584951 USP16Q9Y5T5 823 aa16.87■□□□□ 0.29
DDX42-219ENST00000584951 THSD7BQ9C0I4 1608 aa16.86■□□□□ 0.29
DDX42-219ENST00000584951 BTBD11A6QL63 1104 aa16.86■□□□□ 0.29
DDX42-219ENST00000584951 MAP2K1Q02750 393 aaPredicted RBP16.86■□□□□ 0.29
DDX42-219ENST00000584951 TPTE2Q6XPS3 522 aa16.86■□□□□ 0.29
DDX42-219ENST00000584951 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
DDX42-219ENST00000584951 KIF7Q2M1P5 1343 aa16.86■□□□□ 0.29
DDX42-219ENST00000584951 WDR33Q9C0J8 1336 aaKnown RBP16.86■□□□□ 0.29
DDX42-219ENST00000584951 SNED1Q8TER0 1413 aa16.86■□□□□ 0.29
DDX42-219ENST00000584951 ALDH1B1P30837 517 aa16.85■□□□□ 0.29
DDX42-219ENST00000584951 IARSP41252 1262 aaKnown RBP16.85■□□□□ 0.29
DDX42-219ENST00000584951 GPC2Q8N158 579 aa16.85■□□□□ 0.29
DDX42-219ENST00000584951 ABHD8Q96I13 439 aa16.85■□□□□ 0.29
DDX42-219ENST00000584951 NPC1L1Q9UHC9 1359 aa16.85■□□□□ 0.29
DDX42-219ENST00000584951 U2SURPO15042 1029 aaKnown RBP16.84■□□□□ 0.29
DDX42-219ENST00000584951 CC2D1BQ5T0F9 858 aaKnown RBP16.84■□□□□ 0.29
DDX42-219ENST00000584951 MAP1SQ66K74 1059 aaPredicted RBP16.84■□□□□ 0.29
DDX42-219ENST00000584951 PSMD1Q99460 953 aa16.84■□□□□ 0.29
DDX42-219ENST00000584951 RNF123Q5XPI4 1314 aa16.84■□□□□ 0.29
DDX42-219ENST00000584951 SNRPA1P09661 255 aaKnown RBP16.83■□□□□ 0.28
DDX42-219ENST00000584951 OLFM4Q6UX06 510 aa16.83■□□□□ 0.28
DDX42-219ENST00000584951 SYNE4Q8N205 404 aa16.83■□□□□ 0.28
DDX42-219ENST00000584951 PRAMEF22A3QJZ6 481 aa16.82■□□□□ 0.28
DDX42-219ENST00000584951 PIP4K2AP48426 406 aaPredicted RBP16.82■□□□□ 0.28
DDX42-219ENST00000584951 DDX21Q9NR30 783 aaKnown RBP eCLIP16.82■□□□□ 0.28
DDX42-219ENST00000584951 NIP7Q9Y221 180 aaKnown RBP eCLIP16.82■□□□□ 0.28
DDX42-219ENST00000584951 CRY2Q49AN0 593 aa16.81■□□□□ 0.28
DDX42-219ENST00000584951 CC2D2BQ6DHV5 1058 aa16.81■□□□□ 0.28
DDX42-219ENST00000584951 PHACTR3Q96KR7 559 aa16.81■□□□□ 0.28
DDX42-219ENST00000584951 LTBP1Q14766 1721 aa16.81■□□□□ 0.28
DDX42-219ENST00000584951 NBPF26B4DH59 902 aa16.8■□□□□ 0.28
DDX42-219ENST00000584951 NBPF10Q6P3W6 841 aaKnown RBP16.8■□□□□ 0.28
DDX42-219ENST00000584951 NBPF15Q8N660 670 aa16.8■□□□□ 0.28
DDX42-219ENST00000584951 JDP2Q8WYK2 163 aa16.8■□□□□ 0.28
DDX42-219ENST00000584951 RSPH6AQ9H0K4 717 aa16.8■□□□□ 0.28
DDX42-219ENST00000584951 ABT1Q9ULW3 272 aaKnown RBP16.8■□□□□ 0.28
DDX42-219ENST00000584951 PRKAR2BP31323 418 aa16.79■□□□□ 0.28
DDX42-219ENST00000584951 ECE1P42892 770 aa16.79■□□□□ 0.28
DDX42-219ENST00000584951 FAM161AQ3B820 660 aa16.79■□□□□ 0.28
DDX42-219ENST00000584951 GRIPAP1Q4V328 841 aa16.79■□□□□ 0.28
DDX42-219ENST00000584951 PCGF6Q9BYE7 350 aa16.79■□□□□ 0.28
DDX42-219ENST00000584951 RIC1Q4ADV7 1423 aa16.79■□□□□ 0.28
DDX42-219ENST00000584951 COL4A5P29400 1685 aa16.78■□□□□ 0.28
DDX42-219ENST00000584951 TRPM7Q96QT4 1865 aa16.78■□□□□ 0.28
DDX42-219ENST00000584951 RGS19P49795 217 aa16.78■□□□□ 0.28
DDX42-219ENST00000584951 EIF6P56537 245 aaKnown RBP16.78■□□□□ 0.28
DDX42-219ENST00000584951 LAMB4A4D0S4 1761 aa16.77■□□□□ 0.28
DDX42-219ENST00000584951 LMOD1P29536 600 aaPredicted RBP16.77■□□□□ 0.28
DDX42-219ENST00000584951 SCNN1DP51172 638 aa16.77■□□□□ 0.28
DDX42-219ENST00000584951 HLFQ16534 295 aa16.77■□□□□ 0.28
DDX42-219ENST00000584951 CAPNS2Q96L46 248 aa16.77■□□□□ 0.28
DDX42-219ENST00000584951 NYXQ9GZU5 481 aa16.77■□□□□ 0.28
DDX42-219ENST00000584951 GTF2E1P29083 439 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms