RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 PLBD2Q8NHP8 589 aa21.2■□□□□ 0.98
CDK5RAP3-230ENST00000584042 AFDNP55196 1824 aaKnown RBP21.2■□□□□ 0.98
CDK5RAP3-230ENST00000584042 AIMP1Q12904 312 aaKnown RBP21.19■□□□□ 0.98
CDK5RAP3-230ENST00000584042 DDX19BQ9UMR2 479 aa21.19■□□□□ 0.98
CDK5RAP3-230ENST00000584042 COG6Q9Y2V7 657 aa21.19■□□□□ 0.98
CDK5RAP3-230ENST00000584042 TUBGCP6Q96RT7 1819 aa21.18■□□□□ 0.98
CDK5RAP3-230ENST00000584042 SF3B2Q13435 895 aaKnown RBP21.18■□□□□ 0.98
CDK5RAP3-230ENST00000584042 KIF6Q6ZMV9 814 aa21.18■□□□□ 0.98
CDK5RAP3-230ENST00000584042 TTLL7Q6ZT98 887 aa21.18■□□□□ 0.98
CDK5RAP3-230ENST00000584042 ANKRD13DQ6ZTN6 518 aa21.18■□□□□ 0.98
CDK5RAP3-230ENST00000584042 NPM2Q86SE8 214 aaKnown RBP21.18■□□□□ 0.98
CDK5RAP3-230ENST00000584042 ITPRIPQ8IWB1 547 aa21.18■□□□□ 0.98
CDK5RAP3-230ENST00000584042 MAP3K2Q9Y2U5 619 aa21.18■□□□□ 0.98
CDK5RAP3-230ENST00000584042 QSER1Q2KHR3 1735 aa21.18■□□□□ 0.98
CDK5RAP3-230ENST00000584042 NUP98P52948 1817 aa21.18■□□□□ 0.98
CDK5RAP3-230ENST00000584042 BAG6P46379 1132 aa21.17■□□□□ 0.98
CDK5RAP3-230ENST00000584042 AAMPQ13685 434 aa21.17■□□□□ 0.98
CDK5RAP3-230ENST00000584042 RIC3Q7Z5B4 369 aa21.17■□□□□ 0.98
CDK5RAP3-230ENST00000584042 CCDC125Q86Z20 511 aa21.17■□□□□ 0.98
CDK5RAP3-230ENST00000584042 PROM2Q8N271 834 aa21.17■□□□□ 0.98
CDK5RAP3-230ENST00000584042 ZNF330Q9Y3S2 320 aaPredicted RBP21.17■□□□□ 0.98
CDK5RAP3-230ENST00000584042 MAP3K15Q6ZN16 1313 aa21.17■□□□□ 0.98
CDK5RAP3-230ENST00000584042 A0A087WZG4 1122 aa21.16■□□□□ 0.98
CDK5RAP3-230ENST00000584042 RPS6KA4O75676 772 aa21.16■□□□□ 0.98
CDK5RAP3-230ENST00000584042 SLC4A10Q6U841 1118 aa21.16■□□□□ 0.98
CDK5RAP3-230ENST00000584042 EXOC6Q8TAG9 804 aa21.16■□□□□ 0.98
CDK5RAP3-230ENST00000584042 AK7Q96M32 723 aa21.16■□□□□ 0.98
CDK5RAP3-230ENST00000584042 CHMP4BQ9H444 224 aaKnown RBP21.16■□□□□ 0.98
CDK5RAP3-230ENST00000584042 GNPATO15228 680 aa21.15■□□□□ 0.98
CDK5RAP3-230ENST00000584042 CAMKK2Q96RR4 588 aa21.15■□□□□ 0.98
CDK5RAP3-230ENST00000584042 METTL22Q9BUU2 404 aaPredicted RBP21.15■□□□□ 0.98
CDK5RAP3-230ENST00000584042 GTF3C3Q9Y5Q9 886 aa21.15■□□□□ 0.98
CDK5RAP3-230ENST00000584042 ERVV-1B6SEH8 477 aa21.14■□□□□ 0.97
CDK5RAP3-230ENST00000584042 RGL2O15211 777 aa21.14■□□□□ 0.97
CDK5RAP3-230ENST00000584042 ADRA2BP18089 450 aa21.14■□□□□ 0.97
CDK5RAP3-230ENST00000584042 NEXNQ0ZGT2 675 aa21.14■□□□□ 0.97
CDK5RAP3-230ENST00000584042 BEND3Q5T5X7 828 aa21.14■□□□□ 0.97
CDK5RAP3-230ENST00000584042 DZIP3Q86Y13 1208 aaKnown RBP21.14■□□□□ 0.97
CDK5RAP3-230ENST00000584042 SRCIN1Q9C0H9 1055 aa21.14■□□□□ 0.97
CDK5RAP3-230ENST00000584042 RTCBQ9Y3I0 505 aaKnown RBP21.14■□□□□ 0.97
CDK5RAP3-230ENST00000584042 ALDH1L1O75891 902 aa21.13■□□□□ 0.97
CDK5RAP3-230ENST00000584042 LINS1Q8NG48 757 aa21.13■□□□□ 0.97
CDK5RAP3-230ENST00000584042 ZBTB3Q9H5J0 574 aa21.12■□□□□ 0.97
CDK5RAP3-230ENST00000584042 SSFA2P28290 1259 aa21.11■□□□□ 0.97
CDK5RAP3-230ENST00000584042 HSP90AB3PQ58FF7 597 aa21.11■□□□□ 0.97
CDK5RAP3-230ENST00000584042 COL24A1Q17RW2 1714 aa21.11■□□□□ 0.97
CDK5RAP3-230ENST00000584042 CAMTA2O94983 1202 aa21.1■□□□□ 0.97
CDK5RAP3-230ENST00000584042 EN1Q05925 392 aaPredicted RBP21.1■□□□□ 0.97
CDK5RAP3-230ENST00000584042 EZH2Q15910 746 aaKnown RBP21.1■□□□□ 0.97
CDK5RAP3-230ENST00000584042 GIGYF2Q6Y7W6 1299 aaKnown RBP21.1■□□□□ 0.97
CDK5RAP3-230ENST00000584042 MYD88Q99836 296 aa21.1■□□□□ 0.97
CDK5RAP3-230ENST00000584042 NEURL1BA8MQ27 555 aa21.09■□□□□ 0.97
CDK5RAP3-230ENST00000584042 ZBTB7BO15156 539 aaPredicted RBP21.09■□□□□ 0.97
CDK5RAP3-230ENST00000584042 IGKV5-2P06315 115 aa21.09■□□□□ 0.97
CDK5RAP3-230ENST00000584042 AKT1S1Q96B36 256 aa21.09■□□□□ 0.97
CDK5RAP3-230ENST00000584042 TBC1D2BQ9UPU7 963 aa21.09■□□□□ 0.97
CDK5RAP3-230ENST00000584042 TCIRG1Q13488 830 aa21.08■□□□□ 0.97
CDK5RAP3-230ENST00000584042 ZNF827Q17R98 1081 aa21.08■□□□□ 0.97
CDK5RAP3-230ENST00000584042 AMIGO3Q86WK7 504 aa21.08■□□□□ 0.97
CDK5RAP3-230ENST00000584042 ISCA1Q9BUE6 129 aa21.08■□□□□ 0.97
CDK5RAP3-230ENST00000584042 ZBTB40Q9NUA8 1239 aa21.08■□□□□ 0.97
CDK5RAP3-230ENST00000584042 NARFQ9UHQ1 456 aa21.08■□□□□ 0.97
CDK5RAP3-230ENST00000584042 ZNF652Q9Y2D9 606 aa21.08■□□□□ 0.97
CDK5RAP3-230ENST00000584042 USP42Q9H9J4 1324 aaKnown RBP21.06■□□□□ 0.96
CDK5RAP3-230ENST00000584042 GNAI3P08754 354 aa21.06■□□□□ 0.96
CDK5RAP3-230ENST00000584042 TRIM28Q13263 835 aaKnown RBP21.06■□□□□ 0.96
CDK5RAP3-230ENST00000584042 CWF19L2Q2TBE0 894 aaKnown RBP21.06■□□□□ 0.96
CDK5RAP3-230ENST00000584042 DEFB132Q7Z7B7 95 aa21.06■□□□□ 0.96
CDK5RAP3-230ENST00000584042 ARXQ96QS3 562 aa21.06■□□□□ 0.96
CDK5RAP3-230ENST00000584042 MEIS3Q99687 375 aa21.06■□□□□ 0.96
CDK5RAP3-230ENST00000584042 UTYO14607 1347 aa21.05■□□□□ 0.96
CDK5RAP3-230ENST00000584042 LAMB2P55268 1798 aa21.05■□□□□ 0.96
CDK5RAP3-230ENST00000584042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.05■□□□□ 0.96
CDK5RAP3-230ENST00000584042 HLFQ16534 295 aa21.05■□□□□ 0.96
CDK5RAP3-230ENST00000584042 TRAPPC3LQ5T215 181 aa21.05■□□□□ 0.96
CDK5RAP3-230ENST00000584042 CLEC4GQ6UXB4 293 aa21.05■□□□□ 0.96
CDK5RAP3-230ENST00000584042 CCDC191Q8NCU4 936 aa21.05■□□□□ 0.96
CDK5RAP3-230ENST00000584042 PPP4R2Q9NY27 417 aa21.05■□□□□ 0.96
CDK5RAP3-230ENST00000584042 GCKRQ14397 625 aa21.04■□□□□ 0.96
CDK5RAP3-230ENST00000584042 ARHGEF1Q92888 912 aaKnown RBP21.04■□□□□ 0.96
CDK5RAP3-230ENST00000584042 USP44Q9H0E7 712 aa21.04■□□□□ 0.96
CDK5RAP3-230ENST00000584042 CWC25Q9NXE8 425 aaPredicted RBP21.04■□□□□ 0.96
CDK5RAP3-230ENST00000584042 ATP5J2-PTCD1G3V325 749 aa21.03■□□□□ 0.96
CDK5RAP3-230ENST00000584042 GRM8O00222 908 aa21.03■□□□□ 0.96
CDK5RAP3-230ENST00000584042 PHF14O94880 888 aa21.03■□□□□ 0.96
CDK5RAP3-230ENST00000584042 FLAD1Q8NFF5 587 aa21.03■□□□□ 0.96
CDK5RAP3-230ENST00000584042 ANO8Q9HCE9 1232 aaPredicted RBP21.03■□□□□ 0.96
CDK5RAP3-230ENST00000584042 ZPR1O75312 459 aa21.02■□□□□ 0.96
CDK5RAP3-230ENST00000584042 UBTFL1P0CB47 393 aaPredicted RBP21.02■□□□□ 0.96
CDK5RAP3-230ENST00000584042 RFC4P35249 363 aa21.02■□□□□ 0.96
CDK5RAP3-230ENST00000584042 ZNF34Q8IZ26 560 aa21.02■□□□□ 0.96
CDK5RAP3-230ENST00000584042 UPF1Q92900 1129 aaKnown RBP eCLIP21.02■□□□□ 0.96
CDK5RAP3-230ENST00000584042 TFCP2L1Q9NZI6 479 aa21.02■□□□□ 0.96
CDK5RAP3-230ENST00000584042 PARP10Q53GL7 1025 aa21.01■□□□□ 0.95
CDK5RAP3-230ENST00000584042 STK32BQ9NY57 414 aa21.01■□□□□ 0.95
CDK5RAP3-230ENST00000584042 C9orf78Q9NZ63 289 aaPredicted RBP21.01■□□□□ 0.95
CDK5RAP3-230ENST00000584042 HDAC5Q9UQL6 1122 aa21.01■□□□□ 0.95
CDK5RAP3-230ENST00000584042 UBN2Q6ZU65 1347 aa21.01■□□□□ 0.95
CDK5RAP3-230ENST00000584042 GNAI2P04899 355 aa21■□□□□ 0.95
CDK5RAP3-230ENST00000584042 SLC15A2Q16348 729 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms