RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 CPS1P31327 1500 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 CCDC196A0A1B0GTZ2 297 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 PI4KAP2A4QPH2 592 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 GCP02774 474 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 CHMLP26374 656 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 AIMP1Q12904 312 aaKnown RBP6.91□□□□□ -1.3
RTTN-209ENST00000583043 TOM1L2Q6ZVM7 507 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 PI4KAP1Q8N8J0 262 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 NEUROD6Q96NK8 337 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 A0A087WZG4 1122 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 CBFA2T2O43439 604 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 CWC25Q9NXE8 425 aaPredicted RBP6.91□□□□□ -1.3
RTTN-209ENST00000583043 ANKRD13DQ6ZTN6 518 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 PHAXQ9H814 394 aaKnown RBP6.91□□□□□ -1.3
RTTN-209ENST00000583043 KDRP35968 1356 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 RFX7Q2KHR2 1363 aa6.91□□□□□ -1.3
RTTN-209ENST00000583043 OVOS2A0A0G2JMS6 1433 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 CLCN1P35523 988 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 NT5C2P49902 561 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 NOL8Q76FK4 1167 aaKnown RBP6.9□□□□□ -1.3
RTTN-209ENST00000583043 TMX3Q96JJ7 454 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 NUP62CLQ9H1M0 184 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 MAP3K2Q9Y2U5 619 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 LRRC7Q96NW7 1537 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 PCDH11XQ9BZA7 1347 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 PCDH11YQ9BZA8 1340 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 LRSAM1Q6UWE0 723 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 TRIM22Q8IYM9 498 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 ZNF652Q9Y2D9 606 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 NCOA3Q9Y6Q9 1424 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 SMTNL1A8MU46 457 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 ZNF445P59923 1031 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 MAP3K11Q16584 847 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 PDCL2Q8N4E4 241 aa6.9□□□□□ -1.3
RTTN-209ENST00000583043 GTPBP4Q9BZE4 634 aaKnown RBP6.9□□□□□ -1.3
RTTN-209ENST00000583043 STX6O43752 255 aa6.9□□□□□ -1.31
RTTN-209ENST00000583043 OLFM4Q6UX06 510 aa6.9□□□□□ -1.31
RTTN-209ENST00000583043 CLEC17AQ6ZS10 378 aa6.9□□□□□ -1.31
RTTN-209ENST00000583043 LLPHQ9BRT6 129 aaKnown RBP6.9□□□□□ -1.31
RTTN-209ENST00000583043 RNF41Q9H4P4 317 aaPredicted RBP6.9□□□□□ -1.31
RTTN-209ENST00000583043 OVOS2A0A0J9YW53 1432 aa6.9□□□□□ -1.31
RTTN-209ENST00000583043 OVOS2Q6IE36 1432 aa6.9□□□□□ -1.31
RTTN-209ENST00000583043 DIP2BQ9P265 1576 aa6.9□□□□□ -1.31
RTTN-209ENST00000583043 ZSCAN22P10073 491 aaPredicted RBP6.9□□□□□ -1.31
RTTN-209ENST00000583043 CASTP20810 708 aaKnown RBP6.9□□□□□ -1.31
RTTN-209ENST00000583043 GTF2E1P29083 439 aaPredicted RBP6.9□□□□□ -1.31
RTTN-209ENST00000583043 CEP57L1Q8IYX8 460 aa6.9□□□□□ -1.31
RTTN-209ENST00000583043 GPR108Q9NPR9 543 aa6.9□□□□□ -1.31
RTTN-209ENST00000583043 FAM13BQ9NYF5 915 aa6.9□□□□□ -1.31
RTTN-209ENST00000583043 CEP131Q9UPN4 1083 aa6.9□□□□□ -1.31
RTTN-209ENST00000583043 ATP10DQ9P241 1426 aa6.9□□□□□ -1.31
RTTN-209ENST00000583043 F6X3S4 739 aa6.89□□□□□ -1.31
RTTN-209ENST00000583043 HSP90AA2PQ14568 343 aaPredicted RBP6.89□□□□□ -1.31
RTTN-209ENST00000583043 WASHC4Q2M389 1173 aa6.89□□□□□ -1.31
RTTN-209ENST00000583043 SPATA32Q96LK8 384 aa6.89□□□□□ -1.31
RTTN-209ENST00000583043 PLEKHG5O94827 1062 aa6.89□□□□□ -1.31
RTTN-209ENST00000583043 EIF4A1P60842 406 aaKnown RBP6.89□□□□□ -1.31
RTTN-209ENST00000583043 CWC27Q6UX04 472 aaKnown RBP6.89□□□□□ -1.31
RTTN-209ENST00000583043 IL1RAPL2Q9NP60 686 aa6.89□□□□□ -1.31
RTTN-209ENST00000583043 HELLSQ9NRZ9 838 aa6.89□□□□□ -1.31
RTTN-209ENST00000583043 TMOD3Q9NYL9 352 aa6.89□□□□□ -1.31
RTTN-209ENST00000583043 COL3A1P02461 1466 aaPredicted RBP6.89□□□□□ -1.31
RTTN-209ENST00000583043 NPHP4O75161 1426 aaPredicted RBP6.89□□□□□ -1.31
RTTN-209ENST00000583043 BMP15O95972 392 aa6.89□□□□□ -1.31
RTTN-209ENST00000583043 MTX1Q13505 466 aa6.89□□□□□ -1.31
RTTN-209ENST00000583043 CCDC178Q5BJE1 867 aa6.89□□□□□ -1.31
RTTN-209ENST00000583043 TNMDQ9H2S6 317 aa6.89□□□□□ -1.31
RTTN-209ENST00000583043 RTN4Q9NQC3 1192 aaKnown RBP6.89□□□□□ -1.31
RTTN-209ENST00000583043 LTKP29376 864 aa6.89□□□□□ -1.31
RTTN-209ENST00000583043 CEBPAP49715 358 aaPredicted RBP6.89□□□□□ -1.31
RTTN-209ENST00000583043 NUTM1Q86Y26 1132 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 TMTC2Q8N394 836 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 SGSM2O43147 1006 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 SSFA2P28290 1259 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 TSR1Q2NL82 804 aaKnown RBP6.88□□□□□ -1.31
RTTN-209ENST00000583043 PLBD2Q8NHP8 589 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 METTL22Q9BUU2 404 aaPredicted RBP6.88□□□□□ -1.31
RTTN-209ENST00000583043 ARHGEF28Q8N1W1 1705 aaKnown RBP6.88□□□□□ -1.31
RTTN-209ENST00000583043 PRR36Q9H6K5 1346 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 ERVV-2B6SEH9 535 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 HSPA4P34932 840 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 STK38Q15208 465 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 NFXL1Q6ZNB6 911 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 TXLNBQ8N3L3 684 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 ANO10Q9NW15 660 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 CHPF2Q9P2E5 772 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 IFT172Q9UG01 1749 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 CLTCQ00610 1675 aaKnown RBP6.88□□□□□ -1.31
RTTN-209ENST00000583043 IGSF3O75054 1194 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 ZNF330Q9Y3S2 320 aaPredicted RBP6.88□□□□□ -1.31
RTTN-209ENST00000583043 FOXO3O43524 673 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 SMARCA5O60264 1052 aaPredicted RBP6.88□□□□□ -1.31
RTTN-209ENST00000583043 PRPF40BQ6NWY9 871 aaKnown RBP6.88□□□□□ -1.31
RTTN-209ENST00000583043 MPRIPQ6WCQ1 1025 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 DNAJC2Q99543 621 aaKnown RBP6.88□□□□□ -1.31
RTTN-209ENST00000583043 MYD88Q99836 296 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 SDF4Q9BRK5 362 aa6.88□□□□□ -1.31
RTTN-209ENST00000583043 IFIT1P09914 478 aaKnown RBP6.87□□□□□ -1.31
RTTN-209ENST00000583043 GPS2Q13227 327 aa6.87□□□□□ -1.31
RTTN-209ENST00000583043 IFIT5Q13325 482 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms