RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 IL16Q14005 1332 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 SOX12O15370 315 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 CCDC91Q7Z6B0 441 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 RBSNQ9H1K0 784 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 PRDM10Q9NQV6 1147 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 CFAP65Q6ZU64 1925 aaKnown RBP5.04□□□□□ -1.6
RTTN-206ENST00000581161 JCADQ9P266 1359 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 PLEKHG1Q9ULL1 1385 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 PLCH1Q4KWH8 1693 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 TSPYL6Q8N831 410 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 ERCC4Q92889 916 aaPredicted RBP5.03□□□□□ -1.6
RTTN-206ENST00000581161 CHAMP1Q96JM3 812 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 HOMEZQ8IX15 550 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 C16orf71Q8IYS4 520 aaPredicted RBP5.03□□□□□ -1.6
RTTN-206ENST00000581161 ZGPATQ8N5A5 531 aaKnown RBP5.03□□□□□ -1.6
RTTN-206ENST00000581161 ROBO2Q9HCK4 1378 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 EDC4Q6P2E9 1401 aaKnown RBP5.03□□□□□ -1.6
RTTN-206ENST00000581161 TRIM6-TRIM34B2RNG4 842 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 PRIM1P49642 420 aaKnown RBP5.03□□□□□ -1.6
RTTN-206ENST00000581161 SF3B2Q13435 895 aaKnown RBP5.03□□□□□ -1.6
RTTN-206ENST00000581161 MRPL50Q8N5N7 158 aaKnown RBP5.03□□□□□ -1.6
RTTN-206ENST00000581161 NOC2LQ9Y3T9 749 aaKnown RBP5.03□□□□□ -1.6
RTTN-206ENST00000581161 TNRQ92752 1358 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 OVOS2A0A0G2JMS6 1433 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 H0YHG0 523 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 REC8O95072 547 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 LRRFIP1Q32MZ4 808 aaKnown RBP5.03□□□□□ -1.6
RTTN-206ENST00000581161 ERC1Q8IUD2 1116 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 PPP1R9BQ96SB3 815 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 CABP1Q9NZU7 370 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 ATAD2Q6PL18 1390 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 NEK4P51957 841 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 PKP1Q13835 747 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 SIRT2Q8IXJ6 389 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 OTUD7AQ8TE49 926 aaPredicted RBP5.03□□□□□ -1.6
RTTN-206ENST00000581161 PRAM1Q96QH2 718 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 MBIPQ9NS73 344 aa5.03□□□□□ -1.6
RTTN-206ENST00000581161 KIF24Q5T7B8 1368 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 TRIM29Q14134 588 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 ENOX2Q16206 610 aaKnown RBP5.02□□□□□ -1.61
RTTN-206ENST00000581161 TTC22Q5TAA0 569 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 RILPL2Q969X0 211 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 TSPY26PQ9H489 355 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 ANO2Q9NQ90 1003 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 PXDNLA1KZ92 1463 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 MSH6P52701 1360 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 FYB1O15117 783 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 ZBTB7BO15156 539 aaPredicted RBP5.02□□□□□ -1.61
RTTN-206ENST00000581161 CYP2E1P05181 493 aaPredicted RBP5.02□□□□□ -1.61
RTTN-206ENST00000581161 FAM83GA6ND36 823 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 EPB41L2O43491 1005 aaKnown RBP5.02□□□□□ -1.61
RTTN-206ENST00000581161 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.02□□□□□ -1.61
RTTN-206ENST00000581161 EMILIN1Q9Y6C2 1016 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 V9GYY5 206 aaPredicted RBP5.02□□□□□ -1.61
RTTN-206ENST00000581161 TMEM2Q9UHN6 1383 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 LAMB4A4D0S4 1761 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 CLGNO14967 610 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 FCHSD2O94868 740 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 FBXO31Q5XUX0 539 aaPredicted RBP5.02□□□□□ -1.61
RTTN-206ENST00000581161 DRC1Q96MC2 740 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 COMMD10Q9Y6G5 202 aa5.02□□□□□ -1.61
RTTN-206ENST00000581161 GSPT1P15170 499 aaKnown RBP5.01□□□□□ -1.61
RTTN-206ENST00000581161 NFE2L2Q16236 605 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 ANKARQ7Z5J8 1434 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 CASZ1Q86V15 1759 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 ABCC4O15439 1325 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 LMOD3Q0VAK6 560 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 RNF20Q5VTR2 975 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 FAM114A2Q9NRY5 505 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 OPA1O60313 960 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 BMS1Q14692 1282 aaKnown RBP5.01□□□□□ -1.61
RTTN-206ENST00000581161 GIGYF2Q6Y7W6 1299 aaKnown RBP5.01□□□□□ -1.61
RTTN-206ENST00000581161 LRP10Q7Z4F1 713 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 PHACTR3Q96KR7 559 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 CWC15Q9P013 229 aaKnown RBP5.01□□□□□ -1.61
RTTN-206ENST00000581161 PLEKHG3A1L390 1219 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 TRHP20396 242 aaPredicted RBP5.01□□□□□ -1.61
RTTN-206ENST00000581161 MRPS9P82933 396 aaKnown RBP5.01□□□□□ -1.61
RTTN-206ENST00000581161 TSHZ3Q63HK5 1081 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 PLEKHM2Q8IWE5 1019 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 PLCD3Q8N3E9 789 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 RUFY2Q8WXA3 655 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 LMBRD1Q9NUN5 540 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 USP6P35125 1406 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 VIMP08670 466 aaKnown RBP5.01□□□□□ -1.61
RTTN-206ENST00000581161 AXDND1Q5T1B0 1012 aaPredicted RBP5.01□□□□□ -1.61
RTTN-206ENST00000581161 SASS6Q6UVJ0 657 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 GDPD2Q9HCC8 539 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 ERC2O15083 957 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 VAMP4O75379 141 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 HSP90B2PQ58FF3 399 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 CPLX2Q6PUV4 134 aaKnown RBP5.01□□□□□ -1.61
RTTN-206ENST00000581161 SAMD1Q6SPF0 538 aaPredicted RBP5.01□□□□□ -1.61
RTTN-206ENST00000581161 C8orf58Q8NAV2 365 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 ZNF830Q96NB3 372 aaPredicted RBP5.01□□□□□ -1.61
RTTN-206ENST00000581161 CDK19Q9BWU1 502 aa5.01□□□□□ -1.61
RTTN-206ENST00000581161 NOL7Q9UMY1 257 aaKnown RBP5.01□□□□□ -1.61
RTTN-206ENST00000581161 MPHOSPH10O00566 681 aaKnown RBP5□□□□□ -1.61
RTTN-206ENST00000581161 MBD3O95983 291 aa5□□□□□ -1.61
RTTN-206ENST00000581161 FERP16591 822 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms