RNA–Protein interactions for RNA: ENST00000580508.1

RBFOX3-204, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-204ENST00000580508 DLG5Q8TDM6 1919 aa28.75■■■□□ 2.19
RBFOX3-204ENST00000580508 C21orf2O43822 256 aa28.75■■■□□ 2.19
RBFOX3-204ENST00000580508 DCTN1Q14203 1278 aa28.75■■■□□ 2.19
RBFOX3-204ENST00000580508 SRGNP10124 158 aa28.74■■■□□ 2.19
RBFOX3-204ENST00000580508 VEGFAP15692 232 aaPredicted RBP28.74■■■□□ 2.19
RBFOX3-204ENST00000580508 SMC1BQ8NDV3 1235 aa28.74■■■□□ 2.19
RBFOX3-204ENST00000580508 LTBP3Q9NS15 1303 aa28.73■■■□□ 2.19
RBFOX3-204ENST00000580508 NBPF26B4DH59 902 aa28.73■■■□□ 2.19
RBFOX3-204ENST00000580508 HTRA3P83110 453 aa28.73■■■□□ 2.19
RBFOX3-204ENST00000580508 STYK1Q6J9G0 422 aa28.73■■■□□ 2.19
RBFOX3-204ENST00000580508 NBPF10Q6P3W6 841 aaKnown RBP28.73■■■□□ 2.19
RBFOX3-204ENST00000580508 NBPF15Q8N660 670 aa28.73■■■□□ 2.19
RBFOX3-204ENST00000580508 RGL2O15211 777 aa28.72■■■□□ 2.19
RBFOX3-204ENST00000580508 ST5P78524 1137 aa28.72■■■□□ 2.19
RBFOX3-204ENST00000580508 CNKSR1Q969H4 720 aa28.72■■■□□ 2.19
RBFOX3-204ENST00000580508 LAMB4A4D0S4 1761 aa28.72■■■□□ 2.19
RBFOX3-204ENST00000580508 POTECB2RU33 542 aa28.71■■■□□ 2.19
RBFOX3-204ENST00000580508 KLRG1Q96E93 195 aa28.71■■■□□ 2.19
RBFOX3-204ENST00000580508 TAF7Q15545 349 aaPredicted RBP28.7■■■□□ 2.18
RBFOX3-204ENST00000580508 MASTLQ96GX5 879 aa28.7■■■□□ 2.18
RBFOX3-204ENST00000580508 ZNF219Q9P2Y4 722 aaPredicted RBP28.7■■■□□ 2.18
RBFOX3-204ENST00000580508 KDM3BQ7LBC6 1761 aa28.7■■■□□ 2.18
RBFOX3-204ENST00000580508 JMYQ8N9B5 988 aa28.69■■■□□ 2.18
RBFOX3-204ENST00000580508 ZNF652Q9Y2D9 606 aa28.69■■■□□ 2.18
RBFOX3-204ENST00000580508 NPHP1O15259 732 aa28.68■■■□□ 2.18
RBFOX3-204ENST00000580508 PRPF40BQ6NWY9 871 aaKnown RBP28.68■■■□□ 2.18
RBFOX3-204ENST00000580508 ERFEQ4G0M1 354 aa28.67■■■□□ 2.18
RBFOX3-204ENST00000580508 NBPF5PQ86XG9 351 aaPredicted RBP28.67■■■□□ 2.18
RBFOX3-204ENST00000580508 TAOK3Q9H2K8 898 aa28.67■■■□□ 2.18
RBFOX3-204ENST00000580508 KLRG2A4D1S0 409 aaPredicted RBP28.66■■■□□ 2.18
RBFOX3-204ENST00000580508 DPY19L2Q6NUT2 758 aa28.66■■■□□ 2.18
RBFOX3-204ENST00000580508 C7orf43Q8WVR3 580 aa28.66■■■□□ 2.18
RBFOX3-204ENST00000580508 SOGA3Q5TF21 947 aa28.64■■■□□ 2.18
RBFOX3-204ENST00000580508 PLEKHF1Q96S99 279 aa28.64■■■□□ 2.18
RBFOX3-204ENST00000580508 MIS18AQ9NYP9 233 aa28.64■■■□□ 2.18
RBFOX3-204ENST00000580508 NIP7Q9Y221 180 aaKnown RBP eCLIP28.63■■■□□ 2.17
RBFOX3-204ENST00000580508 TPTE2Q6XPS3 522 aa28.62■■■□□ 2.17
RBFOX3-204ENST00000580508 NUP98P52948 1817 aa28.62■■■□□ 2.17
RBFOX3-204ENST00000580508 NPR1P16066 1061 aa28.61■■■□□ 2.17
RBFOX3-204ENST00000580508 HLFQ16534 295 aa28.6■■■□□ 2.17
RBFOX3-204ENST00000580508 PNISRQ8TF01 805 aaKnown RBP28.6■■■□□ 2.17
RBFOX3-204ENST00000580508 NEFMP07197 916 aa28.57■■■□□ 2.16
RBFOX3-204ENST00000580508 EIF4A1P60842 406 aaKnown RBP28.57■■■□□ 2.16
RBFOX3-204ENST00000580508 NFE2L2Q16236 605 aa28.57■■■□□ 2.16
RBFOX3-204ENST00000580508 CCDC93Q567U6 631 aa28.57■■■□□ 2.16
RBFOX3-204ENST00000580508 DDNO94850 711 aaPredicted RBP28.56■■■□□ 2.16
RBFOX3-204ENST00000580508 ERVV-1B6SEH8 477 aa28.55■■■□□ 2.16
RBFOX3-204ENST00000580508 SCN4AP35499 1836 aa28.55■■■□□ 2.16
RBFOX3-204ENST00000580508 THUMPD2Q9BTF0 503 aaKnown RBP28.54■■■□□ 2.16
RBFOX3-204ENST00000580508 FAM177BA6PVY3 158 aa28.53■■■□□ 2.16
RBFOX3-204ENST00000580508 FKBP4Q02790 459 aaKnown RBP eCLIP28.53■■■□□ 2.16
RBFOX3-204ENST00000580508 PCNTO95613 3336 aa28.53■■■□□ 2.16
RBFOX3-204ENST00000580508 MAP3K15Q6ZN16 1313 aa28.52■■■□□ 2.16
RBFOX3-204ENST00000580508 L3MBTL3Q96JM7 780 aaPredicted RBP28.52■■■□□ 2.16
RBFOX3-204ENST00000580508 SNED1Q8TER0 1413 aa28.52■■■□□ 2.16
RBFOX3-204ENST00000580508 ABCC12Q96J65 1359 aa28.51■■■□□ 2.16
RBFOX3-204ENST00000580508 CRY2Q49AN0 593 aa28.51■■■□□ 2.15
RBFOX3-204ENST00000580508 OLFM4Q6UX06 510 aa28.51■■■□□ 2.15
RBFOX3-204ENST00000580508 CHADLQ6NUI6 762 aa28.5■■■□□ 2.15
RBFOX3-204ENST00000580508 TTLL7Q6ZT98 887 aa28.5■■■□□ 2.15
RBFOX3-204ENST00000580508 RIC1Q4ADV7 1423 aa28.5■■■□□ 2.15
RBFOX3-204ENST00000580508 POTEIP0CG38 1075 aa28.49■■■□□ 2.15
RBFOX3-204ENST00000580508 POTEJP0CG39 1038 aa28.49■■■□□ 2.15
RBFOX3-204ENST00000580508 ALDH1B1P30837 517 aa28.49■■■□□ 2.15
RBFOX3-204ENST00000580508 RTKN2Q8IZC4 609 aa28.49■■■□□ 2.15
RBFOX3-204ENST00000580508 NGEFQ8N5V2 710 aa28.49■■■□□ 2.15
RBFOX3-204ENST00000580508 NYXQ9GZU5 481 aa28.49■■■□□ 2.15
RBFOX3-204ENST00000580508 PNNQ9H307 717 aaKnown RBP28.49■■■□□ 2.15
RBFOX3-204ENST00000580508 RRP7AQ9Y3A4 280 aaKnown RBP28.49■■■□□ 2.15
RBFOX3-204ENST00000580508 IBTKQ9P2D0 1353 aaPredicted RBP28.49■■■□□ 2.15
RBFOX3-204ENST00000580508 ZNF277Q9NRM2 450 aaPredicted RBP28.48■■■□□ 2.15
RBFOX3-204ENST00000580508 GTF2E1P29083 439 aaPredicted RBP28.47■■■□□ 2.15
RBFOX3-204ENST00000580508 ERBB4Q15303 1308 aa28.46■■■□□ 2.15
RBFOX3-204ENST00000580508 UBN2Q6ZU65 1347 aa28.46■■■□□ 2.15
RBFOX3-204ENST00000580508 MAPK8IP3Q9UPT6 1336 aa28.46■■■□□ 2.15
RBFOX3-204ENST00000580508 IQCA1LA6NCM1 817 aa28.46■■■□□ 2.15
RBFOX3-204ENST00000580508 NUTM1Q86Y26 1132 aa28.46■■■□□ 2.15
RBFOX3-204ENST00000580508 ZNF541Q9H0D2 1346 aa28.45■■■□□ 2.15
RBFOX3-204ENST00000580508 COL13A1Q5TAT6 717 aaPredicted RBP28.45■■■□□ 2.14
RBFOX3-204ENST00000580508 KIF6Q6ZMV9 814 aa28.45■■■□□ 2.14
RBFOX3-204ENST00000580508 TAF1DQ9H5J8 278 aaPredicted RBP28.45■■■□□ 2.14
RBFOX3-204ENST00000580508 MYL6BP14649 208 aa28.44■■■□□ 2.14
RBFOX3-204ENST00000580508 ZNF34Q8IZ26 560 aa28.44■■■□□ 2.14
RBFOX3-204ENST00000580508 ADAMTSL1Q8N6G6 1762 aa28.43■■■□□ 2.14
RBFOX3-204ENST00000580508 HOXA10P31260 410 aaPredicted RBP28.43■■■□□ 2.14
RBFOX3-204ENST00000580508 LRP10Q7Z4F1 713 aa28.43■■■□□ 2.14
RBFOX3-204ENST00000580508 ZBTB3Q9H5J0 574 aa28.43■■■□□ 2.14
RBFOX3-204ENST00000580508 FZD9O00144 591 aa28.42■■■□□ 2.14
RBFOX3-204ENST00000580508 IARSP41252 1262 aaKnown RBP28.42■■■□□ 2.14
RBFOX3-204ENST00000580508 SUSD4Q5VX71 490 aa28.42■■■□□ 2.14
RBFOX3-204ENST00000580508 GIGYF2Q6Y7W6 1299 aaKnown RBP28.42■■■□□ 2.14
RBFOX3-204ENST00000580508 LDHDQ86WU2 507 aa28.42■■■□□ 2.14
RBFOX3-204ENST00000580508 SYNE4Q8N205 404 aa28.42■■■□□ 2.14
RBFOX3-204ENST00000580508 PSMD1Q99460 953 aa28.42■■■□□ 2.14
RBFOX3-204ENST00000580508 CREBZFQ9NS37 354 aa28.42■■■□□ 2.14
RBFOX3-204ENST00000580508 GPTP24298 496 aa28.41■■■□□ 2.14
RBFOX3-204ENST00000580508 PASKQ96RG2 1323 aa28.41■■■□□ 2.14
RBFOX3-204ENST00000580508 NTSR2O95665 410 aa28.4■■■□□ 2.14
RBFOX3-204ENST00000580508 PDIA6Q15084 440 aa28.4■■■□□ 2.14
RBFOX3-204ENST00000580508 CC2D2BQ6DHV5 1058 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms