RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 STYK1Q6J9G0 422 aa17.79■□□□□ 0.44
TRAF4-214ENST00000580073 CLEC4GQ6UXB4 293 aa17.79■□□□□ 0.44
TRAF4-214ENST00000580073 DNAJC5GQ8N7S2 189 aa17.79■□□□□ 0.44
TRAF4-214ENST00000580073 NFKBIEO00221 500 aa17.78■□□□□ 0.44
TRAF4-214ENST00000580073 HTATSF1O43719 755 aaKnown RBP17.78■□□□□ 0.44
TRAF4-214ENST00000580073 CAMTA2O94983 1202 aa17.78■□□□□ 0.44
TRAF4-214ENST00000580073 SNRPA1P09661 255 aaKnown RBP17.78■□□□□ 0.44
TRAF4-214ENST00000580073 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
TRAF4-214ENST00000580073 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRAF4-214ENST00000580073 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
TRAF4-214ENST00000580073 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.44
TRAF4-214ENST00000580073 A1BGP04217 495 aa17.77■□□□□ 0.44
TRAF4-214ENST00000580073 DDX10Q13206 875 aaKnown RBP17.77■□□□□ 0.44
TRAF4-214ENST00000580073 MASTLQ96GX5 879 aa17.77■□□□□ 0.44
TRAF4-214ENST00000580073 ERFEQ4G0M1 354 aa17.76■□□□□ 0.43
TRAF4-214ENST00000580073 NBPF5PQ86XG9 351 aaPredicted RBP17.76■□□□□ 0.43
TRAF4-214ENST00000580073 JMYQ8N9B5 988 aa17.76■□□□□ 0.43
TRAF4-214ENST00000580073 C21orf2O43822 256 aa17.75■□□□□ 0.43
TRAF4-214ENST00000580073 PHACTR3Q96KR7 559 aa17.75■□□□□ 0.43
TRAF4-214ENST00000580073 PPP2R1AP30153 589 aa17.74■□□□□ 0.43
TRAF4-214ENST00000580073 PRPF40BQ6NWY9 871 aaKnown RBP17.74■□□□□ 0.43
TRAF4-214ENST00000580073 SRGNP10124 158 aa17.73■□□□□ 0.43
TRAF4-214ENST00000580073 CCDC93Q567U6 631 aa17.72■□□□□ 0.43
TRAF4-214ENST00000580073 TPTE2Q6XPS3 522 aa17.72■□□□□ 0.43
TRAF4-214ENST00000580073 PNISRQ8TF01 805 aaKnown RBP17.72■□□□□ 0.43
TRAF4-214ENST00000580073 ZNF219Q9P2Y4 722 aaPredicted RBP17.72■□□□□ 0.43
TRAF4-214ENST00000580073 IQCA1LA6NCM1 817 aa17.71■□□□□ 0.43
TRAF4-214ENST00000580073 KCNQ3O43525 872 aa17.71■□□□□ 0.43
TRAF4-214ENST00000580073 NPR1P16066 1061 aa17.71■□□□□ 0.43
TRAF4-214ENST00000580073 PRELPP51888 382 aa17.71■□□□□ 0.43
TRAF4-214ENST00000580073 MCM10Q7L590 875 aa17.71■□□□□ 0.43
TRAF4-214ENST00000580073 PNNQ9H307 717 aaKnown RBP17.71■□□□□ 0.43
TRAF4-214ENST00000580073 USP16Q9Y5T5 823 aa17.71■□□□□ 0.43
TRAF4-214ENST00000580073 NIP7Q9Y221 180 aaKnown RBP eCLIP17.7■□□□□ 0.42
TRAF4-214ENST00000580073 ANKRD36CQ5JPF3 1778 aa17.7■□□□□ 0.42
TRAF4-214ENST00000580073 HTRA3P83110 453 aa17.69■□□□□ 0.42
TRAF4-214ENST00000580073 TAF7Q15545 349 aaPredicted RBP17.69■□□□□ 0.42
TRAF4-214ENST00000580073 CCDC24Q8N4L8 307 aa17.69■□□□□ 0.42
TRAF4-214ENST00000580073 NYXQ9GZU5 481 aa17.69■□□□□ 0.42
TRAF4-214ENST00000580073 GTF2E1P29083 439 aaPredicted RBP17.68■□□□□ 0.42
TRAF4-214ENST00000580073 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
TRAF4-214ENST00000580073 IBTKQ9P2D0 1353 aaPredicted RBP17.67■□□□□ 0.42
TRAF4-214ENST00000580073 RIC1Q4ADV7 1423 aa17.67■□□□□ 0.42
TRAF4-214ENST00000580073 FKBP4Q02790 459 aaKnown RBP eCLIP17.67■□□□□ 0.42
TRAF4-214ENST00000580073 RTKN2Q8IZC4 609 aa17.67■□□□□ 0.42
TRAF4-214ENST00000580073 ALDH1B1P30837 517 aa17.66■□□□□ 0.42
TRAF4-214ENST00000580073 PIP4K2AP48426 406 aaPredicted RBP17.66■□□□□ 0.42
TRAF4-214ENST00000580073 CHADLQ6NUI6 762 aa17.66■□□□□ 0.42
TRAF4-214ENST00000580073 KIF6Q6ZMV9 814 aa17.66■□□□□ 0.42
TRAF4-214ENST00000580073 PRAMEF22A3QJZ6 481 aa17.65■□□□□ 0.42
TRAF4-214ENST00000580073 KLRG2A4D1S0 409 aaPredicted RBP17.65■□□□□ 0.42
TRAF4-214ENST00000580073 CREBZFQ9NS37 354 aa17.65■□□□□ 0.42
TRAF4-214ENST00000580073 ADAMTSL1Q8N6G6 1762 aa17.65■□□□□ 0.42
TRAF4-214ENST00000580073 ERVV-1B6SEH8 477 aa17.64■□□□□ 0.41
TRAF4-214ENST00000580073 DCTN1Q14203 1278 aa17.64■□□□□ 0.41
TRAF4-214ENST00000580073 GRIPAP1Q4V328 841 aa17.64■□□□□ 0.41
TRAF4-214ENST00000580073 LDHDQ86WU2 507 aa17.64■□□□□ 0.41
TRAF4-214ENST00000580073 L3MBTL3Q96JM7 780 aaPredicted RBP17.64■□□□□ 0.41
TRAF4-214ENST00000580073 ERBB4Q15303 1308 aa17.64■□□□□ 0.41
TRAF4-214ENST00000580073 POTECB2RU33 542 aa17.63■□□□□ 0.41
TRAF4-214ENST00000580073 NBPF26B4DH59 902 aa17.63■□□□□ 0.41
TRAF4-214ENST00000580073 NBPF10Q6P3W6 841 aaKnown RBP17.63■□□□□ 0.41
TRAF4-214ENST00000580073 NBPF15Q8N660 670 aa17.63■□□□□ 0.41
TRAF4-214ENST00000580073 DDNO94850 711 aaPredicted RBP17.62■□□□□ 0.41
TRAF4-214ENST00000580073 CC2D2BQ6DHV5 1058 aa17.62■□□□□ 0.41
TRAF4-214ENST00000580073 MAP3K15Q6ZN16 1313 aa17.62■□□□□ 0.41
TRAF4-214ENST00000580073 LAMB2P55268 1798 aa17.61■□□□□ 0.41
TRAF4-214ENST00000580073 TRPM7Q96QT4 1865 aa17.61■□□□□ 0.41
TRAF4-214ENST00000580073 NFE2L2Q16236 605 aa17.61■□□□□ 0.41
TRAF4-214ENST00000580073 C7orf43Q8WVR3 580 aa17.61■□□□□ 0.41
TRAF4-214ENST00000580073 FAM177BA6PVY3 158 aa17.6■□□□□ 0.41
TRAF4-214ENST00000580073 HSPA1AP0DMV8 641 aaKnown RBP17.6■□□□□ 0.41
TRAF4-214ENST00000580073 HSPA1BP0DMV9 641 aaKnown RBP17.6■□□□□ 0.41
TRAF4-214ENST00000580073 IARSP41252 1262 aaKnown RBP17.6■□□□□ 0.41
TRAF4-214ENST00000580073 TNS4Q8IZW8 715 aa17.6■□□□□ 0.41
TRAF4-214ENST00000580073 RPGRQ92834 1020 aaKnown RBP17.6■□□□□ 0.41
TRAF4-214ENST00000580073 ABCC12Q96J65 1359 aa17.59■□□□□ 0.41
TRAF4-214ENST00000580073 CRY2Q49AN0 593 aa17.59■□□□□ 0.41
TRAF4-214ENST00000580073 PNMA8AQ86V59 439 aaPredicted RBP17.59■□□□□ 0.41
TRAF4-214ENST00000580073 JDP2Q8WYK2 163 aa17.59■□□□□ 0.41
TRAF4-214ENST00000580073 PSMD1Q99460 953 aa17.59■□□□□ 0.41
TRAF4-214ENST00000580073 TMX4Q9H1E5 349 aaPredicted RBP17.59■□□□□ 0.41
TRAF4-214ENST00000580073 HACL1Q9UJ83 578 aa17.59■□□□□ 0.41
TRAF4-214ENST00000580073 LMOD3Q0VAK6 560 aa17.58■□□□□ 0.4
TRAF4-214ENST00000580073 HLFQ16534 295 aa17.58■□□□□ 0.4
TRAF4-214ENST00000580073 TAF1DQ9H5J8 278 aaPredicted RBP17.58■□□□□ 0.4
TRAF4-214ENST00000580073 ZNF277Q9NRM2 450 aaPredicted RBP17.58■□□□□ 0.4
TRAF4-214ENST00000580073 CNTNAP1P78357 1384 aa17.57■□□□□ 0.4
TRAF4-214ENST00000580073 EIF4A1P60842 406 aaKnown RBP17.57■□□□□ 0.4
TRAF4-214ENST00000580073 COL13A1Q5TAT6 717 aaPredicted RBP17.57■□□□□ 0.4
TRAF4-214ENST00000580073 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
TRAF4-214ENST00000580073 GPC2Q8N158 579 aa17.57■□□□□ 0.4
TRAF4-214ENST00000580073 PLEKHF1Q96S99 279 aa17.57■□□□□ 0.4
TRAF4-214ENST00000580073 SNED1Q8TER0 1413 aa17.56■□□□□ 0.4
TRAF4-214ENST00000580073 PCNTO95613 3336 aa17.56■□□□□ 0.4
TRAF4-214ENST00000580073 RNF123Q5XPI4 1314 aa17.56■□□□□ 0.4
TRAF4-214ENST00000580073 PASKQ96RG2 1323 aa17.56■□□□□ 0.4
TRAF4-214ENST00000580073 ZNF541Q9H0D2 1346 aa17.56■□□□□ 0.4
TRAF4-214ENST00000580073 EIF6P56537 245 aaKnown RBP17.56■□□□□ 0.4
TRAF4-214ENST00000580073 PARP10Q53GL7 1025 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms